Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is bcsB
Identifier: 161485704
GI number: 161485704
Start: 4157800
End: 4160166
Strand: Reverse
Name: bcsB
Synonym: XAC3517
Alternate gene names: 161485704
Gene position: 4160166-4157800 (Counterclockwise)
Preceding gene: 77748724
Following gene: 161485707
Centisome position: 80.38
GC content: 65.99
Gene sequence:
>2367_bases ATGCGTGGTGTTTCTGTTTGCTTTACCAGGACGCAGCTGATGCGGATGTTCCCGGCTGTGTTGAGCTGTGCGTTGACCTT GCTGGCAGGCCTGGCGCAGGCGCAACAGCCCATGCCTGCAACGCCATCTGCGCAGGCAGGCAGCCAGATGCAGGCAGCCA CGCCATCGCAGGTGCCCGTCGCCTTCGCAGCGGCGCCGTTGCCAGGCGGCAGCACGCGTGCGGCAACGCTGCGCGAACTG GGTATCGACTACGAAATCACCTTGCGCGGGGTGCAGGGCAGCGCCGGCGTGCCCTTCAGCGTGCGCAGCGACGAGATCGT CACCGCGGCCACGTTGAATCTCAAATACAGCTACTCGCCCTCGCTGTTGCCCGACCTGTCGCATCTCAAGGTCACCATCA ACGGCGTCACCGTGGCCACGCTGCCCACCGACAAGGCCAACGCCGGCAAGTTGCTCTCGGCCGATCTGCCGATCGATCCG CGCCTGGTCACCGATTACAACCAGCTCAATCTGCAGTTGATCGGCCACTACACGCGCGATTGCGAAGACCCCGACCACAG CAGTCTGTGGGCGAATGTGGATGCGGCCACCAGCCTGTCGCTGACCACCACGCCGCTGGCCTTGGCCAACAACCTGGCGT TGCTGCCGGTGCCGTTCTTCGATATGCGCGACACGCGCCGGCTGGAATTGCCGTTCTATTTCCCGCAGCGCCCGGACACC GCCACGTTGCAGGCGGCCGGCACGGTGGCCTCGTGGTTCGGTAGCCTGGCCGGCTACCGTGGCGCGGTGTTCCCGGCATC CACCGAGGCCTTGCCGGCGTCCGGGAACGCGGTCGTCTTCGCGACGCCCGGCACCTTGCCAGCGCAATTTGCGACCGCCG ACAGCGGCGTGGCCGACATCCGCGGCCCCACCGTGGCCGTGCTGGCCAACCCCAACGATCGCAACGGCAAGCTGCTGCTG GTGCTCGGCCGCAACAGCGAAGACCTGCAGCGTGCCGCCACCGCGCTGGCCTTGCGTGCGCCGTTGACCGGCGCAGTGGC CCGCATCGGCGACATCAGCGCGCCTGCGCCGCGGCGGCCTTACGACGCGCCCAGCTGGGTGTCGAGCGAGCGTCCGGTAC GCTTCGGCGATCTGGTTACCCAGCCCAGCCAGCTCAACGTCGCCGGCTATCATCCCGACCTGATCCGGATAGGCCTGCAG CTGCCGCCGGACCTGTTCGTGTGGAAACGCGACGGCATCCCGGTTGCGTTGAACTACCGCTACACGCTGCCGGAGCAGGA CAACAAATCCGCGCTCAATGTCAGCATCAACGAATCGTTCTTGACCACGCTGCCGCTGACCGGTCGCCCGTTCGCTCAAT CCACGCCGATGCGCTGGTGGAACAGCCTGGGGACGCGCGGCAGCATGCCGGTGCATCAGGACCTGACGCTGCCGGTGGGA GCGTTTTCGGCCAACAGCCAGCTGCGCTTCCATTTCTTCTTCGATCGCCCGCAAGGCGAAGCGTGCAAGAACACCTTCCC GGATGTGTCGGGTGCCATCGATGCCGATTCCACCATCGACCTGAGCGGCTTCCACCACTACATGGCGATGCCCAACCTGG CGGCGTTCGCCAATGCCGGCTATCCGTTCACGCGCCTGGCGGACCTGTCCGAATCCACCATCGTGCTGCCCGACAATCCC GGCGATCAGGACCTGAGCAACGTGCTGACCCTGCTCGGGCATTTCGGTGCTTCCACCGGTTACCCGGCGCTGCATGCGCA GATCATTGGCGCCGGCGCGGTGCAGCAGCATGCCGGCCGCGATCTGTTGCTGCTCGGTAGCGCCGAATCGCAACCGTTGT TCAAACAATGGCGCGCGCATCTGCCGATCGGTCAGGACGGGCAGGCGACCCGCTTTGCGCTGACCGACTGGCTGTTCGAA CGACTGCCGCGATTTTTATCCTTCGATGCGCGCCGCACCGACCTGCCCACCACCGCCGAGATCGCCCTGCAGCCGCAGCC GGACGACGTACTGCTGATGGGCTTCGAATCGCCGCTGAAATCCGGCCGCAGCGTGGTCGCCTTCCAGACCGAAGACCCGG CCAACATGAGCCGCCTGTTCGATGCCTGGTTCGACCCGACCCTGCTCAAGGATTTCCAAGGCAGCGTGGTGTTGCTGCAG CAGAACAACGTCACCAGCCTGGTCGGCAACCAGACCTATTACGTGGGGCACCTGCCGCTGCCGACCTGGCTGCGCTGGTA TTTCTCGCATCACCCGGTGTGGCTGGCCTTCACCGTGGTGCTGCTGGCGCTGTTGCTGGCCTTGGCTGCACGCGTGCTGC TGCGCAGGCGCACCGCCGAGCGGCTCAACGACGGTGGCGGCGCATGA
Upstream 100 bases:
>100_bases CCAGTGCACGCGGATTCGGGCGACTGGGCGGGCATATCGTGGACAGCGCGCGGCAGGGCTTTCGTCCGAGGCGCGCGGTG GATCTGGAGTCGTGAGTGTG
Downstream 100 bases:
>100_bases GCGCGCACGCACATACCGGTGGCATGACGCGCCGTCGCCTGCTGCATGCAGGCACATTGGCGGGCGTGGCCGCGCTGCTG CCGGCAGCCGCGCTGGCGGC
Product: cellulose synthase regulator protein
Products: NA
Alternate protein names: Cellulose synthase regulatory subunit
Number of amino acids: Translated: 788; Mature: 788
Protein sequence:
>788_residues MRGVSVCFTRTQLMRMFPAVLSCALTLLAGLAQAQQPMPATPSAQAGSQMQAATPSQVPVAFAAAPLPGGSTRAATLREL GIDYEITLRGVQGSAGVPFSVRSDEIVTAATLNLKYSYSPSLLPDLSHLKVTINGVTVATLPTDKANAGKLLSADLPIDP RLVTDYNQLNLQLIGHYTRDCEDPDHSSLWANVDAATSLSLTTTPLALANNLALLPVPFFDMRDTRRLELPFYFPQRPDT ATLQAAGTVASWFGSLAGYRGAVFPASTEALPASGNAVVFATPGTLPAQFATADSGVADIRGPTVAVLANPNDRNGKLLL VLGRNSEDLQRAATALALRAPLTGAVARIGDISAPAPRRPYDAPSWVSSERPVRFGDLVTQPSQLNVAGYHPDLIRIGLQ LPPDLFVWKRDGIPVALNYRYTLPEQDNKSALNVSINESFLTTLPLTGRPFAQSTPMRWWNSLGTRGSMPVHQDLTLPVG AFSANSQLRFHFFFDRPQGEACKNTFPDVSGAIDADSTIDLSGFHHYMAMPNLAAFANAGYPFTRLADLSESTIVLPDNP GDQDLSNVLTLLGHFGASTGYPALHAQIIGAGAVQQHAGRDLLLLGSAESQPLFKQWRAHLPIGQDGQATRFALTDWLFE RLPRFLSFDARRTDLPTTAEIALQPQPDDVLLMGFESPLKSGRSVVAFQTEDPANMSRLFDAWFDPTLLKDFQGSVVLLQ QNNVTSLVGNQTYYVGHLPLPTWLRWYFSHHPVWLAFTVVLLALLLALAARVLLRRRTAERLNDGGGA
Sequences:
>Translated_788_residues MRGVSVCFTRTQLMRMFPAVLSCALTLLAGLAQAQQPMPATPSAQAGSQMQAATPSQVPVAFAAAPLPGGSTRAATLREL GIDYEITLRGVQGSAGVPFSVRSDEIVTAATLNLKYSYSPSLLPDLSHLKVTINGVTVATLPTDKANAGKLLSADLPIDP RLVTDYNQLNLQLIGHYTRDCEDPDHSSLWANVDAATSLSLTTTPLALANNLALLPVPFFDMRDTRRLELPFYFPQRPDT ATLQAAGTVASWFGSLAGYRGAVFPASTEALPASGNAVVFATPGTLPAQFATADSGVADIRGPTVAVLANPNDRNGKLLL VLGRNSEDLQRAATALALRAPLTGAVARIGDISAPAPRRPYDAPSWVSSERPVRFGDLVTQPSQLNVAGYHPDLIRIGLQ LPPDLFVWKRDGIPVALNYRYTLPEQDNKSALNVSINESFLTTLPLTGRPFAQSTPMRWWNSLGTRGSMPVHQDLTLPVG AFSANSQLRFHFFFDRPQGEACKNTFPDVSGAIDADSTIDLSGFHHYMAMPNLAAFANAGYPFTRLADLSESTIVLPDNP GDQDLSNVLTLLGHFGASTGYPALHAQIIGAGAVQQHAGRDLLLLGSAESQPLFKQWRAHLPIGQDGQATRFALTDWLFE RLPRFLSFDARRTDLPTTAEIALQPQPDDVLLMGFESPLKSGRSVVAFQTEDPANMSRLFDAWFDPTLLKDFQGSVVLLQ QNNVTSLVGNQTYYVGHLPLPTWLRWYFSHHPVWLAFTVVLLALLLALAARVLLRRRTAERLNDGGGA >Mature_788_residues MRGVSVCFTRTQLMRMFPAVLSCALTLLAGLAQAQQPMPATPSAQAGSQMQAATPSQVPVAFAAAPLPGGSTRAATLREL GIDYEITLRGVQGSAGVPFSVRSDEIVTAATLNLKYSYSPSLLPDLSHLKVTINGVTVATLPTDKANAGKLLSADLPIDP RLVTDYNQLNLQLIGHYTRDCEDPDHSSLWANVDAATSLSLTTTPLALANNLALLPVPFFDMRDTRRLELPFYFPQRPDT ATLQAAGTVASWFGSLAGYRGAVFPASTEALPASGNAVVFATPGTLPAQFATADSGVADIRGPTVAVLANPNDRNGKLLL VLGRNSEDLQRAATALALRAPLTGAVARIGDISAPAPRRPYDAPSWVSSERPVRFGDLVTQPSQLNVAGYHPDLIRIGLQ LPPDLFVWKRDGIPVALNYRYTLPEQDNKSALNVSINESFLTTLPLTGRPFAQSTPMRWWNSLGTRGSMPVHQDLTLPVG AFSANSQLRFHFFFDRPQGEACKNTFPDVSGAIDADSTIDLSGFHHYMAMPNLAAFANAGYPFTRLADLSESTIVLPDNP GDQDLSNVLTLLGHFGASTGYPALHAQIIGAGAVQQHAGRDLLLLGSAESQPLFKQWRAHLPIGQDGQATRFALTDWLFE RLPRFLSFDARRTDLPTTAEIALQPQPDDVLLMGFESPLKSGRSVVAFQTEDPANMSRLFDAWFDPTLLKDFQGSVVLLQ QNNVTSLVGNQTYYVGHLPLPTWLRWYFSHHPVWLAFTVVLLALLLALAARVLLRRRTAERLNDGGGA
Specific function: Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP)
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcsB/BcsB family
Homologues:
Organism=Escherichia coli, GI1789952, Length=759, Percent_Identity=33.9920948616601, Blast_Score=407, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BCSB_XANAC (P58933)
Other databases:
- EMBL: AE008923 - RefSeq: NP_643824.3 - GeneID: 1157588 - GenomeReviews: AE008923_GR - KEGG: xac:XAC3517 - NMPDR: fig|190486.1.peg.3468 - HOGENOM: HBG367709 - OMA: QPYDAPN - ProtClustDB: PRK11114 - BioCyc: XAXO190486:XAC3517-MONOMER - InterPro: IPR003920 - InterPro: IPR018513 - PRINTS: PR01440
Pfam domain/function: PF03170 BcsB
EC number: NA
Molecular weight: Translated: 85171; Mature: 85171
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x121bd190)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVSVCFTRTQLMRMFPAVLSCALTLLAGLAQAQQPMPATPSAQAGSQMQAATPSQVPV CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE AFAAAPLPGGSTRAATLRELGIDYEITLRGVQGSAGVPFSVRSDEIVTAATLNLKYSYSP EEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCEEEEEEEEEEECCCC SLLPDLSHLKVTINGVTVATLPTDKANAGKLLSADLPIDPRLVTDYNQLNLQLIGHYTRD CCCCCCCEEEEEECCEEEEEECCCCCCCCCEEECCCCCCCEEECCCCCEEEEEEEEHHCC CEDPDHSSLWANVDAATSLSLTTTPLALANNLALLPVPFFDMRDTRRLELPFYFPQRPDT CCCCCCCCEEECCCCCCEEEEEECCHHHHCCEEEEECCCCCCCCCCEEECCEECCCCCCC ATLQAAGTVASWFGSLAGYRGAVFPASTEALPASGNAVVFATPGTLPAQFATADSGVADI CEEEEHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEC RGPTVAVLANPNDRNGKLLLVLGRNSEDLQRAATALALRAPLTGAVARIGDISAPAPRRP CCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC YDAPSWVSSERPVRFGDLVTQPSQLNVAGYHPDLIRIGLQLPPDLFVWKRDGIPVALNYR CCCCCCCCCCCCEEHHHHHCCCCCEEEECCCCCCEEEECCCCCCEEEEECCCCCEEEEEE YTLPEQDNKSALNVSINESFLTTLPLTGRPFAQSTPMRWWNSLGTRGSMPVHQDLTLPVG EECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEE AFSANSQLRFHFFFDRPQGEACKNTFPDVSGAIDADSTIDLSGFHHYMAMPNLAAFANAG EECCCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEECCCCHHHHHCCCHHHHHCCC YPFTRLADLSESTIVLPDNPGDQDLSNVLTLLGHFGASTGYPALHAQIIGAGAVQQHAGR CCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCHHHHHCCC DLLLLGSAESQPLFKQWRAHLPIGQDGQATRFALTDWLFERLPRFLSFDARRTDLPTTAE CEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE IALQPQPDDVLLMGFESPLKSGRSVVAFQTEDPANMSRLFDAWFDPTLLKDFQGSVVLLQ EEECCCCCCEEEEECCHHHHCCCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCCCEEEEE QNNVTSLVGNQTYYVGHLPLPTWLRWYFSHHPVWLAFTVVLLALLLALAARVLLRRRTAE CCCEEEEECCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNDGGGA HHCCCCCH >Mature Secondary Structure MRGVSVCFTRTQLMRMFPAVLSCALTLLAGLAQAQQPMPATPSAQAGSQMQAATPSQVPV CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE AFAAAPLPGGSTRAATLRELGIDYEITLRGVQGSAGVPFSVRSDEIVTAATLNLKYSYSP EEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCEEEEEEEEEEECCCC SLLPDLSHLKVTINGVTVATLPTDKANAGKLLSADLPIDPRLVTDYNQLNLQLIGHYTRD CCCCCCCEEEEEECCEEEEEECCCCCCCCCEEECCCCCCCEEECCCCCEEEEEEEEHHCC CEDPDHSSLWANVDAATSLSLTTTPLALANNLALLPVPFFDMRDTRRLELPFYFPQRPDT CCCCCCCCEEECCCCCCEEEEEECCHHHHCCEEEEECCCCCCCCCCEEECCEECCCCCCC ATLQAAGTVASWFGSLAGYRGAVFPASTEALPASGNAVVFATPGTLPAQFATADSGVADI CEEEEHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCEEC RGPTVAVLANPNDRNGKLLLVLGRNSEDLQRAATALALRAPLTGAVARIGDISAPAPRRP CCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC YDAPSWVSSERPVRFGDLVTQPSQLNVAGYHPDLIRIGLQLPPDLFVWKRDGIPVALNYR CCCCCCCCCCCCEEHHHHHCCCCCEEEECCCCCCEEEECCCCCCEEEEECCCCCEEEEEE YTLPEQDNKSALNVSINESFLTTLPLTGRPFAQSTPMRWWNSLGTRGSMPVHQDLTLPVG EECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEE AFSANSQLRFHFFFDRPQGEACKNTFPDVSGAIDADSTIDLSGFHHYMAMPNLAAFANAG EECCCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEECCCCHHHHHCCCHHHHHCCC YPFTRLADLSESTIVLPDNPGDQDLSNVLTLLGHFGASTGYPALHAQIIGAGAVQQHAGR CCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCHHHHHCCC DLLLLGSAESQPLFKQWRAHLPIGQDGQATRFALTDWLFERLPRFLSFDARRTDLPTTAE CEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE IALQPQPDDVLLMGFESPLKSGRSVVAFQTEDPANMSRLFDAWFDPTLLKDFQGSVVLLQ EEECCCCCCEEEEECCHHHHCCCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCCCEEEEE QNNVTSLVGNQTYYVGHLPLPTWLRWYFSHHPVWLAFTVVLLALLLALAARVLLRRRTAE CCCEEEEECCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNDGGGA HHCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217