Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is 16119908

Identifier: 16119908

GI number: 16119908

Start: 114961

End: 116079

Strand: Direct

Name: 16119908

Synonym: Atu6094

Alternate gene names: NA

Gene position: 114961-116079 (Clockwise)

Preceding gene: 16119907

Following gene: 159161972

Centisome position: 53.66

GC content: 50.76

Gene sequence:

>1119_bases
ATGATACGCGCTTTCAAATCGTCGTCGAACTCAACCGAAATTATCAACCTCGACAGGGATGCCATCCGAGAAAACCATCG
GAATGGTCGACAAACCAATATTATGTTCGACACCAATATCCTGATTGCAATCGAAAGCGCCTATAAGACTGGCCAGCGAC
ACCAGGAACTTAAGAATGCTGGTGTTCTGGAACTGGCGAGACTCATCGAGAAAACCTCCAAGTATGGCGTATTCATCTCG
CCCGCAGCGGCTTACCAAGAACTGCCCCCAGCGCGTCGAGGCGACGTTGAAGCAGCGTTCGACAGTTTTCTTGCAGACTA
TCTGCCAAATTTCCGCGAGGACCCAAACTCGATAAAGGTTCCGTATGCTGGTGGAAAGATGGACCCTGAGCATTTTAGCG
CGCTGTCGCTAGAGCGTCAGAAGGCAATCTCGTGCTCATATGCTTCGCTGCTCGCTATGAACGTCATACATCGATTAGAG
GCGTTGAATGGCCTGGAAAAATTCGCCCTCTACATCGATTATTGCGCCGAGGTACTGGATCTCATCAGTCTCAAGGAACT
GACGATCGCTCGATATGTCTTCGCCCCCGAAAATGGCTTAACTGACCAACTCAGGACGCGGAAAGTAGCTATCACAAACA
ACTTCGTGAAACTGAAAAAGGGTGGCGGCAAAGGCTTGACACCCGTCAAAGTACTGGAGCGCATCGCTTTGAATGGAGCC
AACGACCTGAAGCTGATTGCTGCTGCAGATATCGTGAACAATTCGCGCGAGCAGTTCAACTTCGGGATCATCGAGCATGA
TGTCTGGATCGCAACGAGCGACGATAAGCTCTACGAGTTTTGCTGCGCCTGCCCGGGCTACATGGGTCGGGAACGTGGCG
GTCCCCTGGCTAGATATGTCGAGACACATACTGACATAAAGGGAACCCGCTACTGGCGGGATTCCATCGAAATACAGCAG
CGCAGACTTGAGGAGCGCTATTTCACAGTAGATCGCGAAAAGGAAATGGACTCAATTGTGCAGTCAGCCTTTGATATCGA
GGCTGACCTGCTGAACGGTAAAGCTGACGATTATTTCAGACTAAGGTCATGGCGATCTGCGCGAGTGATGCATGACTAA

Upstream 100 bases:

>100_bases
CAGATTATTATACAGGAGAGGCCAGTGGAAGCTTGGTATCGACAAGAAGACCCAGATTTCGGGACCGAGAATTCACGCAG
AGCATAAAACAGAGAACCTC

Downstream 100 bases:

>100_bases
TACGGGTCCTCGCCCCGGGCCTCTAGACGCAAGCGTTCGAACCCATGCTTTCGCTCCTGCCCCTTTAGCTGTTGAGGCAG
TACGGCAATGTCCTCGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MIRAFKSSSNSTEIINLDRDAIRENHRNGRQTNIMFDTNILIAIESAYKTGQRHQELKNAGVLELARLIEKTSKYGVFIS
PAAAYQELPPARRGDVEAAFDSFLADYLPNFREDPNSIKVPYAGGKMDPEHFSALSLERQKAISCSYASLLAMNVIHRLE
ALNGLEKFALYIDYCAEVLDLISLKELTIARYVFAPENGLTDQLRTRKVAITNNFVKLKKGGGKGLTPVKVLERIALNGA
NDLKLIAAADIVNNSREQFNFGIIEHDVWIATSDDKLYEFCCACPGYMGRERGGPLARYVETHTDIKGTRYWRDSIEIQQ
RRLEERYFTVDREKEMDSIVQSAFDIEADLLNGKADDYFRLRSWRSARVMHD

Sequences:

>Translated_372_residues
MIRAFKSSSNSTEIINLDRDAIRENHRNGRQTNIMFDTNILIAIESAYKTGQRHQELKNAGVLELARLIEKTSKYGVFIS
PAAAYQELPPARRGDVEAAFDSFLADYLPNFREDPNSIKVPYAGGKMDPEHFSALSLERQKAISCSYASLLAMNVIHRLE
ALNGLEKFALYIDYCAEVLDLISLKELTIARYVFAPENGLTDQLRTRKVAITNNFVKLKKGGGKGLTPVKVLERIALNGA
NDLKLIAAADIVNNSREQFNFGIIEHDVWIATSDDKLYEFCCACPGYMGRERGGPLARYVETHTDIKGTRYWRDSIEIQQ
RRLEERYFTVDREKEMDSIVQSAFDIEADLLNGKADDYFRLRSWRSARVMHD
>Mature_372_residues
MIRAFKSSSNSTEIINLDRDAIRENHRNGRQTNIMFDTNILIAIESAYKTGQRHQELKNAGVLELARLIEKTSKYGVFIS
PAAAYQELPPARRGDVEAAFDSFLADYLPNFREDPNSIKVPYAGGKMDPEHFSALSLERQKAISCSYASLLAMNVIHRLE
ALNGLEKFALYIDYCAEVLDLISLKELTIARYVFAPENGLTDQLRTRKVAITNNFVKLKKGGGKGLTPVKVLERIALNGA
NDLKLIAAADIVNNSREQFNFGIIEHDVWIATSDDKLYEFCCACPGYMGRERGGPLARYVETHTDIKGTRYWRDSIEIQQ
RRLEERYFTVDREKEMDSIVQSAFDIEADLLNGKADDYFRLRSWRSARVMHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42279; Mature: 42279

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRAFKSSSNSTEIINLDRDAIRENHRNGRQTNIMFDTNILIAIESAYKTGQRHQELKNA
CCCCCCCCCCCCEEEECCHHHHHHHCCCCCEEEEEEECEEEEEEECHHHCCHHHHHHHCC
GVLELARLIEKTSKYGVFISPAAAYQELPPARRGDVEAAFDSFLADYLPNFREDPNSIKV
CHHHHHHHHHHHHCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEE
PYAGGKMDPEHFSALSLERQKAISCSYASLLAMNVIHRLEALNGLEKFALYIDYCAEVLD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLKELTIARYVFAPENGLTDQLRTRKVAITNNFVKLKKGGGKGLTPVKVLERIALNGA
HHHHHHHHHHHEEECCCCCCHHHHHHCEEEEECCEEEEECCCCCCCCHHHHHHHHHCCCC
NDLKLIAAADIVNNSREQFNFGIIEHDVWIATSDDKLYEFCCACPGYMGRERGGPLARYV
CCEEEEEEHHHHCCCHHHCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHH
ETHTDIKGTRYWRDSIEIQQRRLEERYFTVDREKEMDSIVQSAFDIEADLLNGKADDYFR
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHH
LRSWRSARVMHD
HHHCCCCCCCCC
>Mature Secondary Structure
MIRAFKSSSNSTEIINLDRDAIRENHRNGRQTNIMFDTNILIAIESAYKTGQRHQELKNA
CCCCCCCCCCCCEEEECCHHHHHHHCCCCCEEEEEEECEEEEEEECHHHCCHHHHHHHCC
GVLELARLIEKTSKYGVFISPAAAYQELPPARRGDVEAAFDSFLADYLPNFREDPNSIKV
CHHHHHHHHHHHHCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEE
PYAGGKMDPEHFSALSLERQKAISCSYASLLAMNVIHRLEALNGLEKFALYIDYCAEVLD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLKELTIARYVFAPENGLTDQLRTRKVAITNNFVKLKKGGGKGLTPVKVLERIALNGA
HHHHHHHHHHHEEECCCCCCHHHHHHCEEEEECCEEEEECCCCCCCCHHHHHHHHHCCCC
NDLKLIAAADIVNNSREQFNFGIIEHDVWIATSDDKLYEFCCACPGYMGRERGGPLARYV
CCEEEEEEHHHHCCCHHHCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHH
ETHTDIKGTRYWRDSIEIQQRRLEERYFTVDREKEMDSIVQSAFDIEADLLNGKADDYFR
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHH
LRSWRSARVMHD
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA