Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is 159161972

Identifier: 159161972

GI number: 159161972

Start: 116838

End: 117917

Strand: Direct

Name: 159161972

Synonym: Atu6096

Alternate gene names: NA

Gene position: 116838-117917 (Clockwise)

Preceding gene: 16119908

Following gene: 41223335

Centisome position: 54.54

GC content: 64.54

Gene sequence:

>1080_bases
CTGCTGGCACCCGGGCGGTGGCCCAAGGTGCAGATTGTCATCTTGCCAGCCGCGCCCTTGCCTCCTTTGCTCTTCGCGAT
GTCCGGAGCGGGCCCGCAAGGTGCGGGGAAAAGAAACAGAAGGAAAGGCGGACGCAAGGGTGCGTCGGGAATTCAAATGG
AAAAGAAGGAACTGGAAGAACTGCGGGACCGCGTGCAATGCGCTGCGGTGCTGGAGCAGGCAGGGTTTGCCATCGACCTG
AAGGAGAGCACCCGCAGGGCGGTCAAATTCCGCGGCGGCGGGGCCATAATCATCGTGATTCACGAGGGCAGGGGCTGGTT
CGATCCGCTGTCCGATGCCAAGGGTGACGTGTTCGGTCTTGTCGAGCATCTCGACCGAGTGCCCTTTGTCGAAGCCCTCG
ACCATGTCGCATCGCTGGTCGACTTCGTCCCGAAGGAGCCGGTCTGGACCCACGCTGCGCGCGAGATCGATCTGCCGGCC
GGAGTTTCAGAACGATGGACGAAGCGCCGCAAGCCGTGGCCGGGTTCGATGACCTGGCGCTATCTCCGCGACGACCGCTG
CGTTCCGGAAGCGACCATCCGCGCAGCGATCCGGCATGATCTCGTGCGCGAAGGTCCGCGCGGCAGCATGTGGGCCGCGC
ACCGTGACAGCGAGGGCGCCGTCACCGGCTGGGAGGAACGCGGGCCGGAATGGCGCGGCTTTTCGACGGGAGGCGCGAAG
GTGTTGTTCAGGTTCGGCGCGATCCATGCGCCGCGCCTTTGCGTGACGGAGGCTGCCATCGACGCCATGAGCCTTGCCGC
GCTGGAGAGTAATCGGCGCGATAGCCTCTATGTCAGTACCGGCGGCGGCTGGGCCCCTGCCACCGATGCGGCGATCCGTT
TATTGGCGGCGCGTAAGGGTATTTTGGTGGTCGCCGCCACGGATAATAACGCGCAGGGCGATATCTACGCTGATCGGTTG
GAAGCAGTTGCCCGGGACGCTAACTGCGGCTTTGAGCGCCATCGTCCCCGCCACGAGGACTGGAACGAGGACCTTTGCAC
TCAGCTGCGCGCGAATTCGAGGAGAGGCGCGATGTCGTGA

Upstream 100 bases:

>100_bases
GGAGATCGTGCATGAATACGTTCCGGGCGGGTCTCATTGAGACCCTTCTCGCCTTTTTGGTGCCGCTTGCGAGCCGCAGG
CGGCAAGGGAAGCTTCGCCG

Downstream 100 bases:

>100_bases
TTATCCGCGGCCTGCAGTGCCGCGACGTATCGCGTGCGCAGATCTCCCACGTCGCCCAGGCTTCCGCTACCCCAGCTGAA
GGGCTCGGCGCCCAGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MLAPGRWPKVQIVILPAAPLPPLLFAMSGAGPQGAGKRNRRKGGRKGASGIQMEKKELEELRDRVQCAAVLEQAGFAIDL
KESTRRAVKFRGGGAIIIVIHEGRGWFDPLSDAKGDVFGLVEHLDRVPFVEALDHVASLVDFVPKEPVWTHAAREIDLPA
GVSERWTKRRKPWPGSMTWRYLRDDRCVPEATIRAAIRHDLVREGPRGSMWAAHRDSEGAVTGWEERGPEWRGFSTGGAK
VLFRFGAIHAPRLCVTEAAIDAMSLAALESNRRDSLYVSTGGGWAPATDAAIRLLAARKGILVVAATDNNAQGDIYADRL
EAVARDANCGFERHRPRHEDWNEDLCTQLRANSRRGAMS

Sequences:

>Translated_359_residues
MLAPGRWPKVQIVILPAAPLPPLLFAMSGAGPQGAGKRNRRKGGRKGASGIQMEKKELEELRDRVQCAAVLEQAGFAIDL
KESTRRAVKFRGGGAIIIVIHEGRGWFDPLSDAKGDVFGLVEHLDRVPFVEALDHVASLVDFVPKEPVWTHAAREIDLPA
GVSERWTKRRKPWPGSMTWRYLRDDRCVPEATIRAAIRHDLVREGPRGSMWAAHRDSEGAVTGWEERGPEWRGFSTGGAK
VLFRFGAIHAPRLCVTEAAIDAMSLAALESNRRDSLYVSTGGGWAPATDAAIRLLAARKGILVVAATDNNAQGDIYADRL
EAVARDANCGFERHRPRHEDWNEDLCTQLRANSRRGAMS
>Mature_359_residues
MLAPGRWPKVQIVILPAAPLPPLLFAMSGAGPQGAGKRNRRKGGRKGASGIQMEKKELEELRDRVQCAAVLEQAGFAIDL
KESTRRAVKFRGGGAIIIVIHEGRGWFDPLSDAKGDVFGLVEHLDRVPFVEALDHVASLVDFVPKEPVWTHAAREIDLPA
GVSERWTKRRKPWPGSMTWRYLRDDRCVPEATIRAAIRHDLVREGPRGSMWAAHRDSEGAVTGWEERGPEWRGFSTGGAK
VLFRFGAIHAPRLCVTEAAIDAMSLAALESNRRDSLYVSTGGGWAPATDAAIRLLAARKGILVVAATDNNAQGDIYADRL
EAVARDANCGFERHRPRHEDWNEDLCTQLRANSRRGAMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39527; Mature: 39527

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPGRWPKVQIVILPAAPLPPLLFAMSGAGPQGAGKRNRRKGGRKGASGIQMEKKELEE
CCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH
LRDRVQCAAVLEQAGFAIDLKESTRRAVKFRGGGAIIIVIHEGRGWFDPLSDAKGDVFGL
HHHHHHHHHHHHHCCCEEEEHHHHHHEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHH
VEHLDRVPFVEALDHVASLVDFVPKEPVWTHAAREIDLPAGVSERWTKRRKPWPGSMTWR
HHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEH
YLRDDRCVPEATIRAAIRHDLVREGPRGSMWAAHRDSEGAVTGWEERGPEWRGFSTGGAK
EECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCHH
VLFRFGAIHAPRLCVTEAAIDAMSLAALESNRRDSLYVSTGGGWAPATDAAIRLLAARKG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC
ILVVAATDNNAQGDIYADRLEAVARDANCGFERHRPRHEDWNEDLCTQLRANSRRGAMS
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLAPGRWPKVQIVILPAAPLPPLLFAMSGAGPQGAGKRNRRKGGRKGASGIQMEKKELEE
CCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHH
LRDRVQCAAVLEQAGFAIDLKESTRRAVKFRGGGAIIIVIHEGRGWFDPLSDAKGDVFGL
HHHHHHHHHHHHHCCCEEEEHHHHHHEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHH
VEHLDRVPFVEALDHVASLVDFVPKEPVWTHAAREIDLPAGVSERWTKRRKPWPGSMTWR
HHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEH
YLRDDRCVPEATIRAAIRHDLVREGPRGSMWAAHRDSEGAVTGWEERGPEWRGFSTGGAK
EECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCHH
VLFRFGAIHAPRLCVTEAAIDAMSLAALESNRRDSLYVSTGGGWAPATDAAIRLLAARKG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC
ILVVAATDNNAQGDIYADRLEAVARDANCGFERHRPRHEDWNEDLCTQLRANSRRGAMS
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA