| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902630
Identifier: 160902630
GI number: 160902630
Start: 1254027
End: 1256225
Strand: Direct
Name: 160902630
Synonym: Pmob_1170
Alternate gene names: NA
Gene position: 1254027-1256225 (Clockwise)
Preceding gene: 160902629
Following gene: 160902631
Centisome position: 57.8
GC content: 38.47
Gene sequence:
>2199_bases GTGAAACTTCAACCAAATGAAAAGATCAACATAGAAGAGATTTTAAACGATTTGGAACATTACACACCAAGAAGAAAAGG ATGGACTTGGAGAAAAAAATTACCTGAAGGAACCAAAAAAAGCGATTTTAATTACTATGAGATAAGTGAGGATTTGAAAA ACTCGATTCCTCTTCCTGCGGCCCATTACTTTGATAACCTAGACCCACAACCAGACACGGTGATAACATCGGAAATCGCT TCAGGAAGATTTGAGGAAGATGTTAGAAGAATGCGCATGGCTGCCTGGCACGGAGCAGATCATATTATGGTCATAAGAAC ACTTGGGCAAAGCCATATAGACGGTCTTATGGAAGGGACCCCTGAAGGTATTGGTGGGATACCGATAACGAGAAAACAGT TGAGGGCAACTAGAAAAGCGCTTGATCTAATTGAAGACGAAGTAGGTAGACCCATAAACTTTCACAGTTATGTTTCAGGT GTAGCAGGCCCTGAAATAGCTGTAATGTTTGCCGAAGAGGGGGTTAATGGAGCTCACCAAGATCCACAGTACAATATTTT GTACAGAGGTATCAATCCTATAAGATCTTTTGTGGATGCCGCTGTTGCAAAAAAAGTGATGGCTTGGGCGAATATACTCC AAATAGATGGTGCCCATAACGCTAACGCATCTGCTAAAAAAGCTAGAAACGTGATGCCGGAGCTTTTGGTCCAACATGCT ATAAACTCGCTATTTTCATTAAAAGTAGGCATGAAAAAAGAAAATATCGCTTTATCAACCGTTCCCCCTGTAGTTTCCCC TTCTCCTGAGTTCAGAATCAACTTGGTCTATGCCGTTACATTGAGAGAACTGTTTAAAGGCTACAAGTTCAGAGCTCAAA TGAACACAAGGTACATCGAATCTGATTTATTCGATGCCACAAGGATTCACGTTTTAAATACCCTCATTTCTCGGTTAACC TCTGCAGACATTCAATCAACTATTACTCCCGACGAAGGTAGAAATGTTCCATGGCACGTTAATTCTATTAGAGGTGTCGA AACGGCTAAACATACATTGATATCAGCGGATAATATTAAACAATACCTCAAAATCGATGAAGAACAAGTTAGAAAAGAAG TAAGAGAATTGAAGATGAGAGCTATATTGATGCTCGAAGAAATCATAGAAATGGGAGGATATTTTGAAGCATTGGAAAAT GGCATGTTCGTAGATAACGGGTACTATCCTGAAAGAGCAGGAGACGGAATAGTCAGAAAAAAGAACGGAGAAATTGCGGC AGGCTCTGTTGTACCAAGGGATAAAGATTATATGGCACCCGTTTGTGAACATTTTGGGTACAACGCCTTACCTGAAGGAT TAGATAAACCTTGTGATTTAATCGGTGGTTGTACCTTACATAATAGAGAAAAGATTCAATTTATTGACGAGTTAGATGAG AGTGATAATGTCGAAAAAAGATTGCAAGAAATAAAAGAATACAAAGAAAATAATCTTATAAAACCAGAAGTTGAATGGAG TTATGATGGTTGGATACAATTGGACATGACCATCCCTGAATCTGAAGAATACGCCAAAGCAGCGGCGGTTGAAATATGTA AAAAAATGGGACTCGAAGATATTCATGTTATTCATTCTGCCATTTTACATCCATCAGAAGGAACGTATCTCGAATTGAAG GCAAAGGTACCTTTCTTTGTTAAAAAGGATGAATTAGAGCTTCCCCAAAAGAACGAAGTGATGAGTGATGACGAGCTTTT TGAATTTTTTGGTAAACACAAGGTCAAAGTAGTAGCCGGAACGATAGGTAATGATGAGCACAACATTGGTATCAGAGAAA TTCTGGATATAAAACATGGAGGTATAGAAAAATATGGAATAAGCTACGTTTACCTTGGTACTTCTGTGCCCCCAGAAAAA ATCATAGATAGTGCGATAGAAGTTGGAGCCCAGGCGGTTTTAGCTTCTATGATTATTACTCATAACGAAGTTCATGTGGA AAATATGAAAAAATTACATGAAATTGCTGTAGAAAAAGGAGTTAGAGATAAATTATTACTTATCGTTGGAGGAACTCAGA TAACCAATGATTTAGCGATCAATAATTACATGGACGCTGGCTTTGGAAGAGGTACCAAAGGGAATCACGTTGCCACATTT TTGGCTAAGAAACTAAAAGAAAGAGAGCAAAACGAATAA
Upstream 100 bases:
>100_bases GCAAAACAAAAAAATATAGGAATAATGGAAGCGGGAGAGGCACTATTAAACGGTCGTTTTTGGGATGATGTTGAGAATAT CTTTAGAGGTGGTGATACAA
Downstream 100 bases:
>100_bases TTTTTAATTAATTTATTCTTGCTTTAAATTTTTTTTTAGTGTAAAATTGAGATAGTGAAACCCTAATTCTTCCAAAGGGA GGAAAACTTGATGTCTTTTG
Product: D-lysine 56-aminomutase alpha subunit
Products: NA
Alternate protein names: D-Lysine; D-Lysine 5 6-Aminomutase Alpha Subunit; D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Alpha Subunit; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Alpha Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Beta-Lysine 56-Aminomutase Alpha Subunit; Cobalamin Vitamin; Beta-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 56-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Alpha Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Beta Subunit
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MKLQPNEKINIEEILNDLEHYTPRRKGWTWRKKLPEGTKKSDFNYYEISEDLKNSIPLPAAHYFDNLDPQPDTVITSEIA SGRFEEDVRRMRMAAWHGADHIMVIRTLGQSHIDGLMEGTPEGIGGIPITRKQLRATRKALDLIEDEVGRPINFHSYVSG VAGPEIAVMFAEEGVNGAHQDPQYNILYRGINPIRSFVDAAVAKKVMAWANILQIDGAHNANASAKKARNVMPELLVQHA INSLFSLKVGMKKENIALSTVPPVVSPSPEFRINLVYAVTLRELFKGYKFRAQMNTRYIESDLFDATRIHVLNTLISRLT SADIQSTITPDEGRNVPWHVNSIRGVETAKHTLISADNIKQYLKIDEEQVRKEVRELKMRAILMLEEIIEMGGYFEALEN GMFVDNGYYPERAGDGIVRKKNGEIAAGSVVPRDKDYMAPVCEHFGYNALPEGLDKPCDLIGGCTLHNREKIQFIDELDE SDNVEKRLQEIKEYKENNLIKPEVEWSYDGWIQLDMTIPESEEYAKAAAVEICKKMGLEDIHVIHSAILHPSEGTYLELK AKVPFFVKKDELELPQKNEVMSDDELFEFFGKHKVKVVAGTIGNDEHNIGIREILDIKHGGIEKYGISYVYLGTSVPPEK IIDSAIEVGAQAVLASMIITHNEVHVENMKKLHEIAVEKGVRDKLLLIVGGTQITNDLAINNYMDAGFGRGTKGNHVATF LAKKLKEREQNE
Sequences:
>Translated_732_residues MKLQPNEKINIEEILNDLEHYTPRRKGWTWRKKLPEGTKKSDFNYYEISEDLKNSIPLPAAHYFDNLDPQPDTVITSEIA SGRFEEDVRRMRMAAWHGADHIMVIRTLGQSHIDGLMEGTPEGIGGIPITRKQLRATRKALDLIEDEVGRPINFHSYVSG VAGPEIAVMFAEEGVNGAHQDPQYNILYRGINPIRSFVDAAVAKKVMAWANILQIDGAHNANASAKKARNVMPELLVQHA INSLFSLKVGMKKENIALSTVPPVVSPSPEFRINLVYAVTLRELFKGYKFRAQMNTRYIESDLFDATRIHVLNTLISRLT SADIQSTITPDEGRNVPWHVNSIRGVETAKHTLISADNIKQYLKIDEEQVRKEVRELKMRAILMLEEIIEMGGYFEALEN GMFVDNGYYPERAGDGIVRKKNGEIAAGSVVPRDKDYMAPVCEHFGYNALPEGLDKPCDLIGGCTLHNREKIQFIDELDE SDNVEKRLQEIKEYKENNLIKPEVEWSYDGWIQLDMTIPESEEYAKAAAVEICKKMGLEDIHVIHSAILHPSEGTYLELK AKVPFFVKKDELELPQKNEVMSDDELFEFFGKHKVKVVAGTIGNDEHNIGIREILDIKHGGIEKYGISYVYLGTSVPPEK IIDSAIEVGAQAVLASMIITHNEVHVENMKKLHEIAVEKGVRDKLLLIVGGTQITNDLAINNYMDAGFGRGTKGNHVATF LAKKLKEREQNE >Mature_732_residues MKLQPNEKINIEEILNDLEHYTPRRKGWTWRKKLPEGTKKSDFNYYEISEDLKNSIPLPAAHYFDNLDPQPDTVITSEIA SGRFEEDVRRMRMAAWHGADHIMVIRTLGQSHIDGLMEGTPEGIGGIPITRKQLRATRKALDLIEDEVGRPINFHSYVSG VAGPEIAVMFAEEGVNGAHQDPQYNILYRGINPIRSFVDAAVAKKVMAWANILQIDGAHNANASAKKARNVMPELLVQHA INSLFSLKVGMKKENIALSTVPPVVSPSPEFRINLVYAVTLRELFKGYKFRAQMNTRYIESDLFDATRIHVLNTLISRLT SADIQSTITPDEGRNVPWHVNSIRGVETAKHTLISADNIKQYLKIDEEQVRKEVRELKMRAILMLEEIIEMGGYFEALEN GMFVDNGYYPERAGDGIVRKKNGEIAAGSVVPRDKDYMAPVCEHFGYNALPEGLDKPCDLIGGCTLHNREKIQFIDELDE SDNVEKRLQEIKEYKENNLIKPEVEWSYDGWIQLDMTIPESEEYAKAAAVEICKKMGLEDIHVIHSAILHPSEGTYLELK AKVPFFVKKDELELPQKNEVMSDDELFEFFGKHKVKVVAGTIGNDEHNIGIREILDIKHGGIEKYGISYVYLGTSVPPEK IIDSAIEVGAQAVLASMIITHNEVHVENMKKLHEIAVEKGVRDKLLLIVGGTQITNDLAINNYMDAGFGRGTKGNHVATF LAKKLKEREQNE
Specific function: Unknown
COG id: COG5012
COG function: function code R; Predicted cobalamin binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82529; Mature: 82529
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQPNEKINIEEILNDLEHYTPRRKGWTWRKKLPEGTKKSDFNYYEISEDLKNSIPLPA CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEECHHHHHCCCCCH AHYFDNLDPQPDTVITSEIASGRFEEDVRRMRMAAWHGADHIMVIRTLGQSHIDGLMEGT HHHHCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHCHHHHHHHHCCC PEGIGGIPITRKQLRATRKALDLIEDEVGRPINFHSYVSGVAGPEIAVMFAEEGVNGAHQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCC DPQYNILYRGINPIRSFVDAAVAKKVMAWANILQIDGAHNANASAKKARNVMPELLVQHA CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHH INSLFSLKVGMKKENIALSTVPPVVSPSPEFRINLVYAVTLRELFKGYKFRAQMNTRYIE HHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEHHCHHHHH SDLFDATRIHVLNTLISRLTSADIQSTITPDEGRNVPWHVNSIRGVETAKHTLISADNIK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHCHHHHH QYLKIDEEQVRKEVRELKMRAILMLEEIIEMGGYFEALENGMFVDNGYYPERAGDGIVRK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCCCCCEEE KNGEIAAGSVVPRDKDYMAPVCEHFGYNALPEGLDKPCDLIGGCTLHNREKIQFIDELDE CCCCEEECCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCCCCCHHHHHHHHCCC SDNVEKRLQEIKEYKENNLIKPEVEWSYDGWIQLDMTIPESEEYAKAAAVEICKKMGLED CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHH IHVIHSAILHPSEGTYLELKAKVPFFVKKDELELPQKNEVMSDDELFEFFGKHKVKVVAG HHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE TIGNDEHNIGIREILDIKHGGIEKYGISYVYLGTSVPPEKIIDSAIEVGAQAVLASMIIT ECCCCCCCCCHHHHHHHCCCCCCHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH HNEVHVENMKKLHEIAVEKGVRDKLLLIVGGTQITNDLAINNYMDAGFGRGTKGNHVATF CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCHHHCCCCCCCCCCCCCCCHHHHH LAKKLKEREQNE HHHHHHHHCCCC >Mature Secondary Structure MKLQPNEKINIEEILNDLEHYTPRRKGWTWRKKLPEGTKKSDFNYYEISEDLKNSIPLPA CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEECHHHHHCCCCCH AHYFDNLDPQPDTVITSEIASGRFEEDVRRMRMAAWHGADHIMVIRTLGQSHIDGLMEGT HHHHCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHCHHHHHHHHCCC PEGIGGIPITRKQLRATRKALDLIEDEVGRPINFHSYVSGVAGPEIAVMFAEEGVNGAHQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCC DPQYNILYRGINPIRSFVDAAVAKKVMAWANILQIDGAHNANASAKKARNVMPELLVQHA CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHH INSLFSLKVGMKKENIALSTVPPVVSPSPEFRINLVYAVTLRELFKGYKFRAQMNTRYIE HHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEHHCHHHHH SDLFDATRIHVLNTLISRLTSADIQSTITPDEGRNVPWHVNSIRGVETAKHTLISADNIK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHCHHHHH QYLKIDEEQVRKEVRELKMRAILMLEEIIEMGGYFEALENGMFVDNGYYPERAGDGIVRK HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCCCCCEEE KNGEIAAGSVVPRDKDYMAPVCEHFGYNALPEGLDKPCDLIGGCTLHNREKIQFIDELDE CCCCEEECCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCCCCCHHHHHHHHCCC SDNVEKRLQEIKEYKENNLIKPEVEWSYDGWIQLDMTIPESEEYAKAAAVEICKKMGLED CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHH IHVIHSAILHPSEGTYLELKAKVPFFVKKDELELPQKNEVMSDDELFEFFGKHKVKVVAG HHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE TIGNDEHNIGIREILDIKHGGIEKYGISYVYLGTSVPPEKIIDSAIEVGAQAVLASMIIT ECCCCCCCCCHHHHHHHCCCCCCHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH HNEVHVENMKKLHEIAVEKGVRDKLLLIVGGTQITNDLAINNYMDAGFGRGTKGNHVATF CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCHHHCCCCCCCCCCCCCCCHHHHH LAKKLKEREQNE HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA