Click here to switch to the map view.

The map label for this gene is 160902554

Identifier: 160902554

GI number: 160902554

Start: 1170329

End: 1171429

Strand: Direct

Name: 160902554

Synonym: Pmob_1093

Alternate gene names: NA

Gene position: 1170329-1171429 (Clockwise)

Preceding gene: 160902553

Following gene: 160902555

Centisome position: 53.94

GC content: 27.79

Gene sequence:

>1101_bases
ATGGATTTACTTTACTATGAAAATTTTAAAAGTTGCAGTTATTTCGTTCCTACCTATAAAAGACAAGGTTCATACTTTGA
TATTAATATAAATGGTTTGAAGGTTGAAGCTAATTATGAAAGCATCAACAACGGTGTAGTAAAAATCATTAGAATGGGGA
ACAATTTTAAAAAATCTTATTGGTTACATATATATACCGTATATAAATATTTCAAAGATAAGGGTGAACCTATAAAAAGA
ATTGTTTTAGAAACATCCAATGGAAGTTATGAAATAAATGTTTCAGATATTCTTTTAAGAGAAAAATGGATAACGAAAGA
ACTTAACGATCTTAAATCAACTAAAAAAGTCCATGGGCCACATTGTAAATTCTGCAAAATTAAAAACCAATGCCATTTGG
AATTTTTAAGGGAAGGAGATTATTCCATAGTCCCTAACTTAAGTAAATCTATGGTTGAGGATTTAAAAAATATGAATTTG
GAACCATTGACAGTTATAAAAACCAATCAAATAGAAAAATTGGACAAAAGATTCAAAAAACCTTTATACAATCTAAAATC
TCTAATTGAAAACCAAGTTTACGTTATTGATGAGCATTCTTTTCCACAAGATTATATAGTCTTTGACGTAGAAACTTACT
TAAACAAAGACTTTTTATTCGGATTTTTGGAAAACGAAACTTACGTTCCTTTCTTTTTAGAAAAAAACACATACAAAATC
GCTGCAAAAATGGTAGATTTCCTGTATGAAAAAGACAAAGTGCTATTGCATTACGATAAAAATGATCTCACAGCCTTAAA
AAAACTTTCATCTAAATATCCTCTATTGAGAGATAAATTAAGTAAAATTTCCTCAAAAACGTGTGATCTATACGAAATAA
TAAGAAAAAATTACAGTTTACCCGTTGTCTCTTATTCATTAAAAGATATAAGTAAATACTTTGGTTTTAATTGGAAAACA
GAGTTAAATGGTTTTGCGGTTATACTCGAGTACAAAAGTTATCTGAACGGCAATAGAAATGCTTTGAAAAATATTTTTAA
ATACAATGAAGATGATTGTAGAGCTACAAAATTAGTATTAGAAAGCCTTAGGGCCATTTAG

Upstream 100 bases:

>100_bases
GACTAGGTTTTTTAAAATCTTTATCAGCGCTGTTTTATGAAATTGGAGACGTGGAAAAACTATACAAAGGCTAAATTTTA
AGATAAGGCGTGTTTAAACA

Downstream 100 bases:

>100_bases
TACGTTCATAAACCCTCTAAATAAGACCTATGTATGGTTTATCCAATGCTGTACATAAGTCTTTTTTAATGTTAGTATAA
ACAATTCTAAAAATTATATA

Product: RecB family-like nuclease

Products: NA

Alternate protein names: RecB Family-Like Nuclease; Nuclease; Nuclease-Like Protein

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MDLLYYENFKSCSYFVPTYKRQGSYFDININGLKVEANYESINNGVVKIIRMGNNFKKSYWLHIYTVYKYFKDKGEPIKR
IVLETSNGSYEINVSDILLREKWITKELNDLKSTKKVHGPHCKFCKIKNQCHLEFLREGDYSIVPNLSKSMVEDLKNMNL
EPLTVIKTNQIEKLDKRFKKPLYNLKSLIENQVYVIDEHSFPQDYIVFDVETYLNKDFLFGFLENETYVPFFLEKNTYKI
AAKMVDFLYEKDKVLLHYDKNDLTALKKLSSKYPLLRDKLSKISSKTCDLYEIIRKNYSLPVVSYSLKDISKYFGFNWKT
ELNGFAVILEYKSYLNGNRNALKNIFKYNEDDCRATKLVLESLRAI

Sequences:

>Translated_366_residues
MDLLYYENFKSCSYFVPTYKRQGSYFDININGLKVEANYESINNGVVKIIRMGNNFKKSYWLHIYTVYKYFKDKGEPIKR
IVLETSNGSYEINVSDILLREKWITKELNDLKSTKKVHGPHCKFCKIKNQCHLEFLREGDYSIVPNLSKSMVEDLKNMNL
EPLTVIKTNQIEKLDKRFKKPLYNLKSLIENQVYVIDEHSFPQDYIVFDVETYLNKDFLFGFLENETYVPFFLEKNTYKI
AAKMVDFLYEKDKVLLHYDKNDLTALKKLSSKYPLLRDKLSKISSKTCDLYEIIRKNYSLPVVSYSLKDISKYFGFNWKT
ELNGFAVILEYKSYLNGNRNALKNIFKYNEDDCRATKLVLESLRAI
>Mature_366_residues
MDLLYYENFKSCSYFVPTYKRQGSYFDININGLKVEANYESINNGVVKIIRMGNNFKKSYWLHIYTVYKYFKDKGEPIKR
IVLETSNGSYEINVSDILLREKWITKELNDLKSTKKVHGPHCKFCKIKNQCHLEFLREGDYSIVPNLSKSMVEDLKNMNL
EPLTVIKTNQIEKLDKRFKKPLYNLKSLIENQVYVIDEHSFPQDYIVFDVETYLNKDFLFGFLENETYVPFFLEKNTYKI
AAKMVDFLYEKDKVLLHYDKNDLTALKKLSSKYPLLRDKLSKISSKTCDLYEIIRKNYSLPVVSYSLKDISKYFGFNWKT
ELNGFAVILEYKSYLNGNRNALKNIFKYNEDDCRATKLVLESLRAI

Specific function: Unknown

COG id: COG2251

COG function: function code R; Predicted nuclease (RecB family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43331; Mature: 43331

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLYYENFKSCSYFVPTYKRQGSYFDININGLKVEANYESINNGVVKIIRMGNNFKKSY
CCEEEECCCCCCEEECCCCCCCCCEEEEEEEEEEEEECHHHHCCCEEEEEEECCCCCHHH
WLHIYTVYKYFKDKGEPIKRIVLETSNGSYEINVSDILLREKWITKELNDLKSTKKVHGP
EEEHHHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
HCKFCKIKNQCHLEFLREGDYSIVPNLSKSMVEDLKNMNLEPLTVIKTNQIEKLDKRFKK
CCCEEEECCCHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
PLYNLKSLIENQVYVIDEHSFPQDYIVFDVETYLNKDFLFGFLENETYVPFFLEKNTYKI
HHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHHHCCCCEEEEECCCEEEEEEEECCHHHH
AAKMVDFLYEKDKVLLHYDKNDLTALKKLSSKYPLLRDKLSKISSKTCDLYEIIRKNYSL
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCC
PVVSYSLKDISKYFGFNWKTELNGFAVILEYKSYLNGNRNALKNIFKYNEDDCRATKLVL
CEEEHHHHHHHHHHCCCEEECCCCEEEEEEEHHHHCCCHHHHHHHHCCCCCHHHHHHHHH
ESLRAI
HHHHCC
>Mature Secondary Structure
MDLLYYENFKSCSYFVPTYKRQGSYFDININGLKVEANYESINNGVVKIIRMGNNFKKSY
CCEEEECCCCCCEEECCCCCCCCCEEEEEEEEEEEEECHHHHCCCEEEEEEECCCCCHHH
WLHIYTVYKYFKDKGEPIKRIVLETSNGSYEINVSDILLREKWITKELNDLKSTKKVHGP
EEEHHHHHHHHHCCCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
HCKFCKIKNQCHLEFLREGDYSIVPNLSKSMVEDLKNMNLEPLTVIKTNQIEKLDKRFKK
CCCEEEECCCHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
PLYNLKSLIENQVYVIDEHSFPQDYIVFDVETYLNKDFLFGFLENETYVPFFLEKNTYKI
HHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHHHCCCCEEEEECCCEEEEEEEECCHHHH
AAKMVDFLYEKDKVLLHYDKNDLTALKKLSSKYPLLRDKLSKISSKTCDLYEIIRKNYSL
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCC
PVVSYSLKDISKYFGFNWKTELNGFAVILEYKSYLNGNRNALKNIFKYNEDDCRATKLVL
CEEEHHHHHHHHHHCCCEEECCCCEEEEEEEHHHHCCCHHHHHHHHCCCCCHHHHHHHHH
ESLRAI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA