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The map label for this gene is ugpB [H]

Identifier: 160902529

GI number: 160902529

Start: 1137103

End: 1138392

Strand: Direct

Name: ugpB [H]

Synonym: Pmob_1068

Alternate gene names: 160902529

Gene position: 1137103-1138392 (Clockwise)

Preceding gene: 160902528

Following gene: 160902536

Centisome position: 52.41

GC content: 38.6

Gene sequence:

>1290_bases
ATGAAGAAAGTTGTTTCTATTCTTTTCACGGTTTTACTTGTTTCTTTTGCTTTTTCTCAAGTCGAGATAGAGTTTTGGCA
TGGCATGGGAGGACAGCTGGGAGAAACTCTGAATTCCTTAGTCGATACTTTTAATAGGGAAAACCCAGATGTTCATGTGT
CAGCCATATATGTGGGAAACTACAGTGCATTAAACCAAAAGTTACTTTCTACGATCACCGCTTATTCCCAAGGAAGTACC
ACAGACCTTCCAACTTTATCTCAAGCTTATGGAAACTGGACCGCAATGTACCTGTTTTCTGATGTAGTGCAACCACTCAA
CGGATATATTGAAAAGGATCCTGAGTTTAAAGAAGCTTGGGATAATCAGATATTCCCTGTTCTAAAGGATTTAGTTACAT
GGGGAGACACAGTATATGGAATCCCATTTAACAAATCTGTTTATGTTTATTATTATAACCCTGATCTATTTGACTTATTT
GGAATCGATCCCCCAAAAACTATGGATGAATTATGGGAAGTAAGTGAACTTTTAACAATGGATTTAGACATGGATGGAGA
AACGGATCAATATGGATTAGGTGCGAGAAACTTTATCGACGATTTTCAAATATTCTTATATGCATATAACGCAACATTTT
TAGAATACGTCGGCGATGGCAAATACAGAGTTGTTTTACCTGAAGAAGAAACAAAAGAAGTTTTAACATTCATAAAGAAC
CTGAAAGATTCTGGATACGCTTTGTTCCAAAACGCATATTTGGATCCCCAGTTTGGCTCTGGAGAAATAGCCGCATACAT
GGGAACGGTTGCAGGTTTAACTTATGCTGAACAATCGTCCAGAGGAAAACACGGTGTTGCTTGGGCTCCATTACCTTCTG
TAGATGGTGTCCCTCACTCTCCTATAGCTGGAACTGATGTGATAATGTTTAACTGGGTAAGCCAAGAGCAAAAAGACGCA
GCTTGGAGATTCTTGAAATTTTTGATGGATCCCGTTAACGTTGCATACTGGTCTATAAATACTGGATATGTTCCAATAAG
AAGAGATGTTGAAGAGGTTCCACAGTGGCAAGCCTATACAGCAACAGATGATAAGCCAAGTATTGCACTTAACGAATTAG
AAACCGCTATCCCAGATCCAAAACCAGCTGCATGGAACGATATAAGAAATGATATCAGTACATTATTTGCTAACTTCCTA
AACGATATGGCAACTGTAGATGAGACATACGATGCCATCGTGAATACTTTAGAAACAGGATTAAAGGAGACAGGCGAATA
CGCTGAATAA

Upstream 100 bases:

>100_bases
TCTAAGCGTTGTGATTTCAAAATATTGAATATTGGTAATTTTGACCAATTGTACAAAGAAACAGAAAAAATTATCCAAAA
CTTATGAGGAGGTGTTCGGA

Downstream 100 bases:

>100_bases
TAAGTAATAATTATCAAAACCCCAGGTAAAACCAAAACCTGGGGTTTTATTTTGGGTGGTATTTACTGAACGATTGAAAT
TCTTAAATTTCTATCTGCTC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MKKVVSILFTVLLVSFAFSQVEIEFWHGMGGQLGETLNSLVDTFNRENPDVHVSAIYVGNYSALNQKLLSTITAYSQGST
TDLPTLSQAYGNWTAMYLFSDVVQPLNGYIEKDPEFKEAWDNQIFPVLKDLVTWGDTVYGIPFNKSVYVYYYNPDLFDLF
GIDPPKTMDELWEVSELLTMDLDMDGETDQYGLGARNFIDDFQIFLYAYNATFLEYVGDGKYRVVLPEEETKEVLTFIKN
LKDSGYALFQNAYLDPQFGSGEIAAYMGTVAGLTYAEQSSRGKHGVAWAPLPSVDGVPHSPIAGTDVIMFNWVSQEQKDA
AWRFLKFLMDPVNVAYWSINTGYVPIRRDVEEVPQWQAYTATDDKPSIALNELETAIPDPKPAAWNDIRNDISTLFANFL
NDMATVDETYDAIVNTLETGLKETGEYAE

Sequences:

>Translated_429_residues
MKKVVSILFTVLLVSFAFSQVEIEFWHGMGGQLGETLNSLVDTFNRENPDVHVSAIYVGNYSALNQKLLSTITAYSQGST
TDLPTLSQAYGNWTAMYLFSDVVQPLNGYIEKDPEFKEAWDNQIFPVLKDLVTWGDTVYGIPFNKSVYVYYYNPDLFDLF
GIDPPKTMDELWEVSELLTMDLDMDGETDQYGLGARNFIDDFQIFLYAYNATFLEYVGDGKYRVVLPEEETKEVLTFIKN
LKDSGYALFQNAYLDPQFGSGEIAAYMGTVAGLTYAEQSSRGKHGVAWAPLPSVDGVPHSPIAGTDVIMFNWVSQEQKDA
AWRFLKFLMDPVNVAYWSINTGYVPIRRDVEEVPQWQAYTATDDKPSIALNELETAIPDPKPAAWNDIRNDISTLFANFL
NDMATVDETYDAIVNTLETGLKETGEYAE
>Mature_429_residues
MKKVVSILFTVLLVSFAFSQVEIEFWHGMGGQLGETLNSLVDTFNRENPDVHVSAIYVGNYSALNQKLLSTITAYSQGST
TDLPTLSQAYGNWTAMYLFSDVVQPLNGYIEKDPEFKEAWDNQIFPVLKDLVTWGDTVYGIPFNKSVYVYYYNPDLFDLF
GIDPPKTMDELWEVSELLTMDLDMDGETDQYGLGARNFIDDFQIFLYAYNATFLEYVGDGKYRVVLPEEETKEVLTFIKN
LKDSGYALFQNAYLDPQFGSGEIAAYMGTVAGLTYAEQSSRGKHGVAWAPLPSVDGVPHSPIAGTDVIMFNWVSQEQKDA
AWRFLKFLMDPVNVAYWSINTGYVPIRRDVEEVPQWQAYTATDDKPSIALNELETAIPDPKPAAWNDIRNDISTLFANFL
NDMATVDETYDAIVNTLETGLKETGEYAE

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=384, Percent_Identity=25.78125, Blast_Score=98, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48356; Mature: 48356

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVSILFTVLLVSFAFSQVEIEFWHGMGGQLGETLNSLVDTFNRENPDVHVSAIYVGN
CHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
YSALNQKLLSTITAYSQGSTTDLPTLSQAYGNWTAMYLFSDVVQPLNGYIEKDPEFKEAW
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
DNQIFPVLKDLVTWGDTVYGIPFNKSVYVYYYNPDLFDLFGIDPPKTMDELWEVSELLTM
CCCHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHH
DLDMDGETDQYGLGARNFIDDFQIFLYAYNATFLEYVGDGKYRVVLPEEETKEVLTFIKN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
LKDSGYALFQNAYLDPQFGSGEIAAYMGTVAGLTYAEQSSRGKHGVAWAPLPSVDGVPHS
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC
PIAGTDVIMFNWVSQEQKDAAWRFLKFLMDPVNVAYWSINTGYVPIRRDVEEVPQWQAYT
CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCHHHCCCCEEEE
ATDDKPSIALNELETAIPDPKPAAWNDIRNDISTLFANFLNDMATVDETYDAIVNTLETG
CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKETGEYAE
HHHCCCCCC
>Mature Secondary Structure
MKKVVSILFTVLLVSFAFSQVEIEFWHGMGGQLGETLNSLVDTFNRENPDVHVSAIYVGN
CHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
YSALNQKLLSTITAYSQGSTTDLPTLSQAYGNWTAMYLFSDVVQPLNGYIEKDPEFKEAW
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
DNQIFPVLKDLVTWGDTVYGIPFNKSVYVYYYNPDLFDLFGIDPPKTMDELWEVSELLTM
CCCHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHH
DLDMDGETDQYGLGARNFIDDFQIFLYAYNATFLEYVGDGKYRVVLPEEETKEVLTFIKN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
LKDSGYALFQNAYLDPQFGSGEIAAYMGTVAGLTYAEQSSRGKHGVAWAPLPSVDGVPHS
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC
PIAGTDVIMFNWVSQEQKDAAWRFLKFLMDPVNVAYWSINTGYVPIRRDVEEVPQWQAYT
CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCHHHCCCCEEEE
ATDDKPSIALNELETAIPDPKPAAWNDIRNDISTLFANFLNDMATVDETYDAIVNTLETG
CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKETGEYAE
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA