| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is engD [H]
Identifier: 160902524
GI number: 160902524
Start: 1132486
End: 1133568
Strand: Direct
Name: engD [H]
Synonym: Pmob_1063
Alternate gene names: 160902524
Gene position: 1132486-1133568 (Clockwise)
Preceding gene: 160902523
Following gene: 160902525
Centisome position: 52.2
GC content: 33.43
Gene sequence:
>1083_bases GTGGAAATAGGCATATTCGGCCTTCCGTTAACGGGTAAAACTACTATTTTTTCCCTTTTAACTGATTATAAAATAGAGGA TAGTTATAAAAGAGAGGCTATAAAAAGAACGGCAATTATAAAAGATGAAAGAGTTAATTCTCTTGCACGTTTATACAATC CTAAAAAGATTATCTTTGCTAGTTTAGATTTTATCGATATTCCAAGCTATGACCACAAAGGGGACCCTAAAGAAAAAACG AGAATTTTTCAGATGATACAGAATGTTGATGCCTTGCTTTTGGTTATAAGATCGTTTAAAAACCCCTCGGTACCTTGGCC TGAAAATGCTGATAATCCAATAAAACAACTAGAAATTTTGAAAACAGAACTAATTCTCAGAGATTTAGAAATTGTAGAAA ATCGATTAGAGAGGCTTGAAACGCAAAAGAAAAAGACAAAATTCTCAGTGACGGAAGAAAACGAAGAAAAAATTTTGTTG AAAATAAAAGAAGTTTTGGAGGATGAGGTTTTCGTTTCGAAGATGGAATTGAGTGAAGAGGATAAAAAATTAGTTGGTTC TTTAGCTTTATTCACTTTAAAACCTATTATCGTATGTGTCAACGTCGATGATGACCAATTTTCAAAAAATAGCTACGAAT ATAAGGAACAGGTAATTGAAGAATGTAAAAAGCAAAATTTTGCCTACATTGAAATAGACGGAAAAATAGAAGTAGAAATA AACGAGCTTGAGGACGAAGAAGAAAAAAGACTATTCTTAGAAGATTTATCAATTAAAGAACCTGGTGTTGAAAGATTAGC AAAAATTGTGTATAATCATGTTGGACTAATTTCTTTCTTCACCGTCGGAAAAGACGAGGTAAGAGCTTGGACGGTAAAAA AAGGTAGTACAATGAAGGAAGCCGCTGGAAAAATACATTCTGATTTCGAGAAGAACTTCATTCGTGCAGAGGTTATGAAA TATGAGGACCTAATTAAATACGGAAGCGAAGAAAAAGTGAAAGAACAGGGACTTTGGAGGCTGGCGGGAAAAGATGAAAT ATTGGAAGATGGTGAAATATTAAACATTAGAGCTAGCACTTGA
Upstream 100 bases:
>100_bases GCGATTGAAAAAGATGGAAAGGAATTTGAAGCTTTAAATTTAGAAGAGTTAGATAAATATTGGGAATTAATTAAAAAAGA GGAAAAGAGGTGAAAATTAG
Downstream 100 bases:
>100_bases TTTGAGGGGTGACCTAATGATACTTGTTACAGGAGGAGCTGGGTACATAGGTTCTCATTTGGTGAAAAGGCTGCAAGATC AAAATAAAGAAGTAGTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MEIGIFGLPLTGKTTIFSLLTDYKIEDSYKREAIKRTAIIKDERVNSLARLYNPKKIIFASLDFIDIPSYDHKGDPKEKT RIFQMIQNVDALLLVIRSFKNPSVPWPENADNPIKQLEILKTELILRDLEIVENRLERLETQKKKTKFSVTEENEEKILL KIKEVLEDEVFVSKMELSEEDKKLVGSLALFTLKPIIVCVNVDDDQFSKNSYEYKEQVIEECKKQNFAYIEIDGKIEVEI NELEDEEEKRLFLEDLSIKEPGVERLAKIVYNHVGLISFFTVGKDEVRAWTVKKGSTMKEAAGKIHSDFEKNFIRAEVMK YEDLIKYGSEEKVKEQGLWRLAGKDEILEDGEILNIRAST
Sequences:
>Translated_360_residues MEIGIFGLPLTGKTTIFSLLTDYKIEDSYKREAIKRTAIIKDERVNSLARLYNPKKIIFASLDFIDIPSYDHKGDPKEKT RIFQMIQNVDALLLVIRSFKNPSVPWPENADNPIKQLEILKTELILRDLEIVENRLERLETQKKKTKFSVTEENEEKILL KIKEVLEDEVFVSKMELSEEDKKLVGSLALFTLKPIIVCVNVDDDQFSKNSYEYKEQVIEECKKQNFAYIEIDGKIEVEI NELEDEEEKRLFLEDLSIKEPGVERLAKIVYNHVGLISFFTVGKDEVRAWTVKKGSTMKEAAGKIHSDFEKNFIRAEVMK YEDLIKYGSEEKVKEQGLWRLAGKDEILEDGEILNIRAST >Mature_360_residues MEIGIFGLPLTGKTTIFSLLTDYKIEDSYKREAIKRTAIIKDERVNSLARLYNPKKIIFASLDFIDIPSYDHKGDPKEKT RIFQMIQNVDALLLVIRSFKNPSVPWPENADNPIKQLEILKTELILRDLEIVENRLERLETQKKKTKFSVTEENEEKILL KIKEVLEDEVFVSKMELSEEDKKLVGSLALFTLKPIIVCVNVDDDQFSKNSYEYKEQVIEECKKQNFAYIEIDGKIEVEI NELEDEEEKRLFLEDLSIKEPGVERLAKIVYNHVGLISFFTVGKDEVRAWTVKKGSTMKEAAGKIHSDFEKNFIRAEVMK YEDLIKYGSEEKVKEQGLWRLAGKDEILEDGEILNIRAST
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=374, Percent_Identity=30.4812834224599, Blast_Score=158, Evalue=7e-39, Organism=Homo sapiens, GI58761502, Length=173, Percent_Identity=37.5722543352601, Blast_Score=115, Evalue=8e-26, Organism=Escherichia coli, GI1787454, Length=360, Percent_Identity=35, Blast_Score=211, Evalue=6e-56, Organism=Caenorhabditis elegans, GI17509631, Length=368, Percent_Identity=31.5217391304348, Blast_Score=157, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6319499, Length=375, Percent_Identity=28.2666666666667, Blast_Score=136, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6321773, Length=380, Percent_Identity=27.3684210526316, Blast_Score=131, Evalue=2e-31, Organism=Drosophila melanogaster, GI24640873, Length=370, Percent_Identity=31.0810810810811, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI24640877, Length=370, Percent_Identity=31.0810810810811, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI24640875, Length=370, Percent_Identity=31.0810810810811, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI24640879, Length=331, Percent_Identity=31.1178247734139, Blast_Score=142, Evalue=2e-34,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 41765; Mature: 41765
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIGIFGLPLTGKTTIFSLLTDYKIEDSYKREAIKRTAIIKDERVNSLARLYNPKKIIFA CCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE SLDFIDIPSYDHKGDPKEKTRIFQMIQNVDALLLVIRSFKNPSVPWPENADNPIKQLEIL ECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH KTELILRDLEIVENRLERLETQKKKTKFSVTEENEEKILLKIKEVLEDEVFVSKMELSEE HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH DKKLVGSLALFTLKPIIVCVNVDDDQFSKNSYEYKEQVIEECKKQNFAYIEIDGKIEVEI HHHHHHHHHHHHHCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEE NELEDEEEKRLFLEDLSIKEPGVERLAKIVYNHVGLISFFTVGKDEVRAWTVKKGSTMKE ECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHEEEEECCCCHHHH AAGKIHSDFEKNFIRAEVMKYEDLIKYGSEEKVKEQGLWRLAGKDEILEDGEILNIRAST HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCCCCCCCEEEEEECC >Mature Secondary Structure MEIGIFGLPLTGKTTIFSLLTDYKIEDSYKREAIKRTAIIKDERVNSLARLYNPKKIIFA CCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE SLDFIDIPSYDHKGDPKEKTRIFQMIQNVDALLLVIRSFKNPSVPWPENADNPIKQLEIL ECCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH KTELILRDLEIVENRLERLETQKKKTKFSVTEENEEKILLKIKEVLEDEVFVSKMELSEE HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH DKKLVGSLALFTLKPIIVCVNVDDDQFSKNSYEYKEQVIEECKKQNFAYIEIDGKIEVEI HHHHHHHHHHHHHCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEE NELEDEEEKRLFLEDLSIKEPGVERLAKIVYNHVGLISFFTVGKDEVRAWTVKKGSTMKE ECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHEEEEECCCCHHHH AAGKIHSDFEKNFIRAEVMKYEDLIKYGSEEKVKEQGLWRLAGKDEILEDGEILNIRAST HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]