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The map label for this gene is lolC [H]

Identifier: 160902371

GI number: 160902371

Start: 959773

End: 960861

Strand: Direct

Name: lolC [H]

Synonym: Pmob_0906

Alternate gene names: 160902371

Gene position: 959773-960861 (Clockwise)

Preceding gene: 160902370

Following gene: 160902372

Centisome position: 44.24

GC content: 32.14

Gene sequence:

>1089_bases
ATGAAAGGTGGTAAAAGAAATAATCCGGTTTTACTTTTGGCTATTTCTTTTTTCACAAGGTCGAAAAAAAACTTTAAATT
CTCACTCATCGCTATGATAATAGGGGTATGGGGTATTATAGTAGTTACTTCAATAATAAATGGTTTCGATAGCTTGTTAA
TAGATTCAATAACTAATTTTTATCCTCATCTAGTTGTTAGAGGAAATTACACTCAAAACTCATCAGAAATAGACAAAATT
GTAAATTTCAACATCTCCTCTGTAGCAGTTATAAACCAATCTAAAATTGCCTTCTCTCAGCTTATGGAATTGGATGATCT
ATCAATCTATGAAGGATTTATAAATGAGGAAAAGGGTACCGAAGGCCTTATATTAGGAAATAAATTAGCAGATAATCTCA
ATGTTGAAATTGGTGATACCATAATAACTGTTAGAACAAAGGGCCTATTACCGATTTTCCAAGAAAGTACCATTACAGGA
ATATTCGATTCTGGGGTATATTCGTACGATTCAACTTTCATATTGTCTCAAAATTCAAACTCAAAAGAATATACCGGCAT
TTTTTTAAAAAATCCAAACAAGGCTCAACAATTTAAAGAAAAATATCTTTCTAGTTACTCCGCCCTCACTTGGGAAGAGT
CCAATGAAACTTTGGCTAAGGCAGTCCAATTTGATAGCTTGATAGCTTTTATGATAACTTTTTTCATTCTTTTGATTTCT
GGATTCAGTATATCAAACTCGGTTTCTTTCTCTGTCTTTACTAGAAAGAAAGAGATAGCTATTTTAAGGGCTCTTGGTTT
TCAAAGAAGACAAGTAACTACTATTTTTATCTTAGAAACTTTTTTAATATCTCTAGTAGGATTTGTACTTGGAGTTATTG
CCGGTGTTTTAACCTGCTGGTTTCTAATTATTTTAAAGATCCCATTACCCGAAGGCCTCTTTTATGTGGAATATTTACCC
ATTAAGATAACAGCCAGCTCTTTTTTGATAGCCTTTTTAATAAACAGTTTTGTATCCATTTTTTTTAGTTATGTCGCATC
AAGGCGAGCAGCGAGCTTCAATATTGTCGAATCTTTAAAAGATGAATAG

Upstream 100 bases:

>100_bases
TTCATCGAAATAGAAGATAAGTACAAATATTTCCAGTTGATAGATTTTATTTCAGAAAATTTGATCGATCCAACGGATTA
CGATGCTCTGGTGGTTCTCA

Downstream 100 bases:

>100_bases
AAGGGGGAGCTTAATTTGGCGGAAAAAGCATTTGTGATGATAAAACCTAACGCTGTTAAAAGAGGACTAATTGGTGAAAT
AATCAAAAGATATGAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKGGKRNNPVLLLAISFFTRSKKNFKFSLIAMIIGVWGIIVVTSIINGFDSLLIDSITNFYPHLVVRGNYTQNSSEIDKI
VNFNISSVAVINQSKIAFSQLMELDDLSIYEGFINEEKGTEGLILGNKLADNLNVEIGDTIITVRTKGLLPIFQESTITG
IFDSGVYSYDSTFILSQNSNSKEYTGIFLKNPNKAQQFKEKYLSSYSALTWEESNETLAKAVQFDSLIAFMITFFILLIS
GFSISNSVSFSVFTRKKEIAILRALGFQRRQVTTIFILETFLISLVGFVLGVIAGVLTCWFLIILKIPLPEGLFYVEYLP
IKITASSFLIAFLINSFVSIFFSYVASRRAASFNIVESLKDE

Sequences:

>Translated_362_residues
MKGGKRNNPVLLLAISFFTRSKKNFKFSLIAMIIGVWGIIVVTSIINGFDSLLIDSITNFYPHLVVRGNYTQNSSEIDKI
VNFNISSVAVINQSKIAFSQLMELDDLSIYEGFINEEKGTEGLILGNKLADNLNVEIGDTIITVRTKGLLPIFQESTITG
IFDSGVYSYDSTFILSQNSNSKEYTGIFLKNPNKAQQFKEKYLSSYSALTWEESNETLAKAVQFDSLIAFMITFFILLIS
GFSISNSVSFSVFTRKKEIAILRALGFQRRQVTTIFILETFLISLVGFVLGVIAGVLTCWFLIILKIPLPEGLFYVEYLP
IKITASSFLIAFLINSFVSIFFSYVASRRAASFNIVESLKDE
>Mature_362_residues
MKGGKRNNPVLLLAISFFTRSKKNFKFSLIAMIIGVWGIIVVTSIINGFDSLLIDSITNFYPHLVVRGNYTQNSSEIDKI
VNFNISSVAVINQSKIAFSQLMELDDLSIYEGFINEEKGTEGLILGNKLADNLNVEIGDTIITVRTKGLLPIFQESTITG
IFDSGVYSYDSTFILSQNSNSKEYTGIFLKNPNKAQQFKEKYLSSYSALTWEESNETLAKAVQFDSLIAFMITFFILLIS
GFSISNSVSFSVFTRKKEIAILRALGFQRRQVTTIFILETFLISLVGFVLGVIAGVLTCWFLIILKIPLPEGLFYVEYLP
IKITASSFLIAFLINSFVSIFFSYVASRRAASFNIVESLKDE

Specific function: Part of an ATP-dependent transport system responsible for the release of lipoproteins targeted to the outer membrane from the inner membrane. Such a release is dependent of the sorting-signal (absence of an Asp at position 2 of the mature lipoprotein) and

COG id: COG4591

COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. LolC/E subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787360, Length=315, Percent_Identity=21.9047619047619, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838
- InterPro:   IPR011925 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 40520; Mature: 40520

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGGKRNNPVLLLAISFFTRSKKNFKFSLIAMIIGVWGIIVVTSIINGFDSLLIDSITNF
CCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPHLVVRGNYTQNSSEIDKIVNFNISSVAVINQSKIAFSQLMELDDLSIYEGFINEEKGT
CCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCHHHHHHHHCCCCCC
EGLILGNKLADNLNVEIGDTIITVRTKGLLPIFQESTITGIFDSGVYSYDSTFILSQNSN
CCEEECCHHCCCCCEEECCEEEEEEECCCCEECCCCCEEEEECCCCEECCCEEEEECCCC
SKEYTGIFLKNPNKAQQFKEKYLSSYSALTWEESNETLAKAVQFDSLIAFMITFFILLIS
CCEEEEEEEECCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GFSISNSVSFSVFTRKKEIAILRALGFQRRQVTTIFILETFLISLVGFVLGVIAGVLTCW
CCCCCCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLIILKIPLPEGLFYVEYLPIKITASSFLIAFLINSFVSIFFSYVASRRAASFNIVESLK
HHHHHHCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
DE
CC
>Mature Secondary Structure
MKGGKRNNPVLLLAISFFTRSKKNFKFSLIAMIIGVWGIIVVTSIINGFDSLLIDSITNF
CCCCCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPHLVVRGNYTQNSSEIDKIVNFNISSVAVINQSKIAFSQLMELDDLSIYEGFINEEKGT
CCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCHHHHHHHHCCCCCC
EGLILGNKLADNLNVEIGDTIITVRTKGLLPIFQESTITGIFDSGVYSYDSTFILSQNSN
CCEEECCHHCCCCCEEECCEEEEEEECCCCEECCCCCEEEEECCCCEECCCEEEEECCCC
SKEYTGIFLKNPNKAQQFKEKYLSSYSALTWEESNETLAKAVQFDSLIAFMITFFILLIS
CCEEEEEEEECCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GFSISNSVSFSVFTRKKEIAILRALGFQRRQVTTIFILETFLISLVGFVLGVIAGVLTCW
CCCCCCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLIILKIPLPEGLFYVEYLPIKITASSFLIAFLINSFVSIFFSYVASRRAASFNIVESLK
HHHHHHCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
DE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]