Click here to switch to the map view.

The map label for this gene is psuG

Identifier: 160902365

GI number: 160902365

Start: 953403

End: 954323

Strand: Direct

Name: psuG

Synonym: Pmob_0900

Alternate gene names: 160902365

Gene position: 953403-954323 (Clockwise)

Preceding gene: 160902364

Following gene: 160902366

Centisome position: 43.94

GC content: 36.59

Gene sequence:

>921_bases
ATGAATACAACCCCATATTTAGAAATAAAAGAAGAAGTGTACCAAGCTTTAAAAGAAAATAGACCTATCGTTGCCTTGGA
ATCAACTATAATTTCTCATGGAATGCCTTATCCACAAAATGTAGAAGTTGCAAAAAATGTAGAAGAAACAATAAGAGAAA
GGGGAGCAGTTCCAGCAACTATCGCAATAATAGATGGCAAAATGAAAGTAGGATTATCAAAAGAAGAATTAGAATTCATG
GCCACCTCCAAAAATATATTGAAAGCAAGCAGGATGGATCTCCCCGTTATCCTTGCAAAAGGTTTTAACGCCGCTACCAC
GGTTGCAGCAACTATGATAATAGCTGAACTTGCTGGAATAAAGGTTTTTGTAACAGGAGGAATAGGAGGTGTACATAGAA
ACGCTCAAGAAACTTTTGATATCTCCGCAGACCTGCAAGAGCTTGCCAAAACCAACGTGGCGGTGATATCTGCTGGACCT
AAAGCTATATTAGATCTTCAATTAACCAAAGAATATCTAGAAACTTTCGGTGTCCCAGTGATTGGCTATCAAACAGACGA
ACTTCCATGCTTTTTTTCGAGGGAAAGTGGGATAAATGTACCTTATAGAGTTGAAACTCCTAAAGAAATCGCATCAATAA
TGAAGACAAAGTGGGACTTGGGCCTACAAGGGGGCATTTTTATTGCAAATCCTATTCCTAAAGAGTATTCACTGGATTTT
GAGGAAATAGATAAAACAATAGAAAACGCAATAGAAGAGGCTAAAAAGCGAAAAATAAAAGGTAAGGAATTAACCCCCTT
TCTACTTTCAAAAATAAACGAATTAACAAAAGGGGAAAGTTTAAAAGCAAATATTGAATTAGTCTACAACAATGCCCAAC
TTGGTGCAGAAATAGCAAAAGAGTTTAACATCCTATCTTAG

Upstream 100 bases:

>100_bases
ATTGGGGATCTTAAGGGGTTTACTCCTTAACGTCCGGGCAAAGTGGCGCTATAGAAAGTTTGTAAAACAATAAAAATACA
GCTTTTGGAGGAAAACTAAT

Downstream 100 bases:

>100_bases
GGGAAAGGAATGATGTATTTGAAAGAGAAACCTATCAAAAGAGTTGCGGCAATTCACGATCTTTCAGGTTTTGGAAAAGC
TTCTTTAACCGTTGTAATTC

Product: indigoidine synthase A family protein

Products: NA

Alternate protein names: PsiMP glycosidase

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNTTPYLEIKEEVYQALKENRPIVALESTIISHGMPYPQNVEVAKNVEETIRERGAVPATIAIIDGKMKVGLSKEELEFM
ATSKNILKASRMDLPVILAKGFNAATTVAATMIIAELAGIKVFVTGGIGGVHRNAQETFDISADLQELAKTNVAVISAGP
KAILDLQLTKEYLETFGVPVIGYQTDELPCFFSRESGINVPYRVETPKEIASIMKTKWDLGLQGGIFIANPIPKEYSLDF
EEIDKTIENAIEEAKKRKIKGKELTPFLLSKINELTKGESLKANIELVYNNAQLGAEIAKEFNILS

Sequences:

>Translated_306_residues
MNTTPYLEIKEEVYQALKENRPIVALESTIISHGMPYPQNVEVAKNVEETIRERGAVPATIAIIDGKMKVGLSKEELEFM
ATSKNILKASRMDLPVILAKGFNAATTVAATMIIAELAGIKVFVTGGIGGVHRNAQETFDISADLQELAKTNVAVISAGP
KAILDLQLTKEYLETFGVPVIGYQTDELPCFFSRESGINVPYRVETPKEIASIMKTKWDLGLQGGIFIANPIPKEYSLDF
EEIDKTIENAIEEAKKRKIKGKELTPFLLSKINELTKGESLKANIELVYNNAQLGAEIAKEFNILS
>Mature_306_residues
MNTTPYLEIKEEVYQALKENRPIVALESTIISHGMPYPQNVEVAKNVEETIRERGAVPATIAIIDGKMKVGLSKEELEFM
ATSKNILKASRMDLPVILAKGFNAATTVAATMIIAELAGIKVFVTGGIGGVHRNAQETFDISADLQELAKTNVAVISAGP
KAILDLQLTKEYLETFGVPVIGYQTDELPCFFSRESGINVPYRVETPKEIASIMKTKWDLGLQGGIFIANPIPKEYSLDF
EEIDKTIENAIEEAKKRKIKGKELTPFLLSKINELTKGESLKANIELVYNNAQLGAEIAKEFNILS

Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil

COG id: COG2313

COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family

Homologues:

Organism=Escherichia coli, GI1788490, Length=301, Percent_Identity=61.4617940199336, Blast_Score=374, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI25147470, Length=298, Percent_Identity=46.3087248322148, Blast_Score=279, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24580669, Length=305, Percent_Identity=46.8852459016393, Blast_Score=289, Evalue=2e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSUG_PETMO (A9BJN0)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001567946.1
- ProteinModelPortal:   A9BJN0
- SMR:   A9BJN0
- GeneID:   5757662
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_0900
- HOGENOM:   HBG308892
- OMA:   PATIAVM
- ProtClustDB:   CLSK862888
- BioCyc:   PMOB403833:PMOB_0900-MONOMER
- HAMAP:   MF_01876
- InterPro:   IPR022830
- InterPro:   IPR007342
- PANTHER:   PTHR10584:SF1

Pfam domain/function: PF04227 Indigoidine_A; SSF110581 Indigdn_synthA

EC number: NA

Molecular weight: Translated: 33645; Mature: 33645

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTPYLEIKEEVYQALKENRPIVALESTIISHGMPYPQNVEVAKNVEETIRERGAVPAT
CCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEE
IAIIDGKMKVGLSKEELEFMATSKNILKASRMDLPVILAKGFNAATTVAATMIIAELAGI
EEEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCE
KVFVTGGIGGVHRNAQETFDISADLQELAKTNVAVISAGPKAILDLQLTKEYLETFGVPV
EEEEECCCCCCCCCCHHHHCCHHHHHHHHHCCEEEEECCCHHEEEHHHHHHHHHHCCCCE
IGYQTDELPCFFSRESGINVPYRVETPKEIASIMKTKWDLGLQGGIFIANPIPKEYSLDF
EEEECCCCCEEEECCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCH
EEIDKTIENAIEEAKKRKIKGKELTPFLLSKINELTKGESLKANIELVYNNAQLGAEIAK
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHH
EFNILS
HCCCCC
>Mature Secondary Structure
MNTTPYLEIKEEVYQALKENRPIVALESTIISHGMPYPQNVEVAKNVEETIRERGAVPAT
CCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEE
IAIIDGKMKVGLSKEELEFMATSKNILKASRMDLPVILAKGFNAATTVAATMIIAELAGI
EEEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCE
KVFVTGGIGGVHRNAQETFDISADLQELAKTNVAVISAGPKAILDLQLTKEYLETFGVPV
EEEEECCCCCCCCCCHHHHCCHHHHHHHHHCCEEEEECCCHHEEEHHHHHHHHHHCCCCE
IGYQTDELPCFFSRESGINVPYRVETPKEIASIMKTKWDLGLQGGIFIANPIPKEYSLDF
EEEECCCCCEEEECCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCH
EEIDKTIENAIEEAKKRKIKGKELTPFLLSKINELTKGESLKANIELVYNNAQLGAEIAK
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHH
EFNILS
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA