Click here to switch to the map view.

The map label for this gene is psuK [H]

Identifier: 160902364

GI number: 160902364

Start: 952213

End: 953136

Strand: Direct

Name: psuK [H]

Synonym: Pmob_0899

Alternate gene names: 160902364

Gene position: 952213-953136 (Clockwise)

Preceding gene: 160902363

Following gene: 160902365

Centisome position: 43.89

GC content: 31.39

Gene sequence:

>924_bases
ATGTATGTATCAGTAATAGGAGGAATAAATACAGATTTCAAAGGATCTTCTTACGAAAAATTATCTCTCAAGACTTCAAA
CCCTGGACGTATCTTTTATTCTTCAGGAGGTGTAGCTCGGAATGTTGCCCACAATTTATGCAAATTAGAAGTCCCTGTTA
ATTTATTTGGAGCAGTTGGGAACGATGTATTTGGTGAAATAATTTTAGCCGAATTAGATAATCTAAAGATAAATACTAAT
TTTATCAAGATTTGTGATAACCGTCGTACGGGTGTTTACCTGGCTATTTTAGACGAAAAAAAAGATATGTTTGTCTCTAT
ATCAGACATGGATATTATTAATGAGATAAATATAAATTATATAAAAAAACACAAAGATACGTTACTCCAATCAAAAATTG
TCTTTCTTGAAGCAAATTTAGAACCTCAGACGATAGAATATATACTTAAAATCCTTGAAAACACGAATGTTTACACAGTT
TTTAACGCCGTATCAAATCTAAAAGTAAAAAAATTAAAAAATATAACTGGAAAAATAGATTATCTGACCCTAAACTTCTC
AGAATTGAAATCCTTAAGAGAACAAGAAAACTTGAATTTTTTTGATTATAAAAGTATACAAAAGACTTTTCCAGAAAAAT
TCCCCAATATTTTTAATTTAATTGTAACAAACGGGGAAGAGGGGGTTCTCCTTTTAAACAATCGCTTTAAAAGAGCAGAT
TTCTTTTCTGTAGCTGAAGTCGAAGACTCTGAAATAGTCGATGCCAATGGTGCCGGAGATGCTTTCACTGCTGGATTTAT
CTACGGCATTTACAAAGATGCTGATATAGAAAAAAGCATTGAATACGGAATAAAAGCCTCTCAAATTACCCTAAAAAGTC
CAAAAACAGTGGCAGATGAGTTATCTTCTGAAATTTTTGGTTGA

Upstream 100 bases:

>100_bases
AATTCACACCACTTGATATTCAAGAAGAAGAAAATTTGCGAAAAAGTTGTGAAGATCTAGGAAAAGTTTTTAACCCTAAA
AACATTTGAGGAGAAATTTT

Downstream 100 bases:

>100_bases
CTAAAAGTCAAAAACAGGGCAAAGCCCTGTTTGCGCTACTGTGCAAACCATGTTTTTTTGCAGCTTTGTGTAAAAAGCCT
TTTGCAGCTTTGTGCAAAAT

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MYVSVIGGINTDFKGSSYEKLSLKTSNPGRIFYSSGGVARNVAHNLCKLEVPVNLFGAVGNDVFGEIILAELDNLKINTN
FIKICDNRRTGVYLAILDEKKDMFVSISDMDIINEININYIKKHKDTLLQSKIVFLEANLEPQTIEYILKILENTNVYTV
FNAVSNLKVKKLKNITGKIDYLTLNFSELKSLREQENLNFFDYKSIQKTFPEKFPNIFNLIVTNGEEGVLLLNNRFKRAD
FFSVAEVEDSEIVDANGAGDAFTAGFIYGIYKDADIEKSIEYGIKASQITLKSPKTVADELSSEIFG

Sequences:

>Translated_307_residues
MYVSVIGGINTDFKGSSYEKLSLKTSNPGRIFYSSGGVARNVAHNLCKLEVPVNLFGAVGNDVFGEIILAELDNLKINTN
FIKICDNRRTGVYLAILDEKKDMFVSISDMDIINEININYIKKHKDTLLQSKIVFLEANLEPQTIEYILKILENTNVYTV
FNAVSNLKVKKLKNITGKIDYLTLNFSELKSLREQENLNFFDYKSIQKTFPEKFPNIFNLIVTNGEEGVLLLNNRFKRAD
FFSVAEVEDSEIVDANGAGDAFTAGFIYGIYKDADIEKSIEYGIKASQITLKSPKTVADELSSEIFG
>Mature_307_residues
MYVSVIGGINTDFKGSSYEKLSLKTSNPGRIFYSSGGVARNVAHNLCKLEVPVNLFGAVGNDVFGEIILAELDNLKINTN
FIKICDNRRTGVYLAILDEKKDMFVSISDMDIINEININYIKKHKDTLLQSKIVFLEANLEPQTIEYILKILENTNVYTV
FNAVSNLKVKKLKNITGKIDYLTLNFSELKSLREQENLNFFDYKSIQKTFPEKFPNIFNLIVTNGEEGVLLLNNRFKRAD
FFSVAEVEDSEIVDANGAGDAFTAGFIYGIYKDADIEKSIEYGIKASQITLKSPKTVADELSSEIFG

Specific function: Catalyzes the phosphorylation of pseudouridine to pseudouridine 5'-phosphate (PsiMP) [H]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI1788491, Length=301, Percent_Identity=27.2425249169435, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788484, Length=303, Percent_Identity=25.7425742574257, Blast_Score=112, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI25147470, Length=292, Percent_Identity=22.6027397260274, Blast_Score=71, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6322565, Length=269, Percent_Identity=24.1635687732342, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24580669, Length=297, Percent_Identity=25.5892255892256, Blast_Score=82, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.83 [H]

Molecular weight: Translated: 34487; Mature: 34487

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVSVIGGINTDFKGSSYEKLSLKTSNPGRIFYSSGGVARNVAHNLCKLEVPVNLFGAVG
CEEEEEECCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHEEEECCHHEEHHCC
NDVFGEIILAELDNLKINTNFIKICDNRRTGVYLAILDEKKDMFVSISDMDIINEININY
CHHHHHHHEEECCCEEEECCEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEHHCCCCE
IKKHKDTLLQSKIVFLEANLEPQTIEYILKILENTNVYTVFNAVSNLKVKKLKNITGKID
EHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEHHHCCHHHHHHCCCCEEE
YLTLNFSELKSLREQENLNFFDYKSIQKTFPEKFPNIFNLIVTNGEEGVLLLNNRFKRAD
EEEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCC
FFSVAEVEDSEIVDANGAGDAFTAGFIYGIYKDADIEKSIEYGIKASQITLKSPKTVADE
CEEEEECCCCEEEECCCCCCCCHHHEEEEEECCCCHHHHHHHCCEEEEEEECCCHHHHHH
LSSEIFG
HHHHHCC
>Mature Secondary Structure
MYVSVIGGINTDFKGSSYEKLSLKTSNPGRIFYSSGGVARNVAHNLCKLEVPVNLFGAVG
CEEEEEECCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHEEEECCHHEEHHCC
NDVFGEIILAELDNLKINTNFIKICDNRRTGVYLAILDEKKDMFVSISDMDIINEININY
CHHHHHHHEEECCCEEEECCEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEHHCCCCE
IKKHKDTLLQSKIVFLEANLEPQTIEYILKILENTNVYTVFNAVSNLKVKKLKNITGKID
EHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEHHHCCHHHHHHCCCCEEE
YLTLNFSELKSLREQENLNFFDYKSIQKTFPEKFPNIFNLIVTNGEEGVLLLNNRFKRAD
EEEEEHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCC
FFSVAEVEDSEIVDANGAGDAFTAGFIYGIYKDADIEKSIEYGIKASQITLKSPKTVADE
CEEEEECCCCEEEECCCCCCCCHHHEEEEEECCCCHHHHHHHCCEEEEEEECCCHHHHHH
LSSEIFG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 3076173 [H]