| Definition | Petrotoga mobilis SJ95 chromosome, complete genome. |
|---|---|
| Accession | NC_010003 |
| Length | 2,169,548 |
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The map label for this gene is 160902113
Identifier: 160902113
GI number: 160902113
Start: 690498
End: 691625
Strand: Direct
Name: 160902113
Synonym: Pmob_0640
Alternate gene names: NA
Gene position: 690498-691625 (Clockwise)
Preceding gene: 160902112
Following gene: 160902114
Centisome position: 31.83
GC content: 32.54
Gene sequence:
>1128_bases ATGGAGAAACAACTAAAAGTATTAGCTGTTGGTGATCCGGCTGTCTATGTCTATGTGGATGATAAATACAACTTTCTAAA GGAGTTTACTAAAGAGACGGGTGTTAAGATTTATTTTGATATAGTAAAATGGGTAGATTACTATCCTACCTTAATTAATT CTTTTCGTGAGTATAAGTATGACATAGTTATGGTTGCTGGACATTTATGGGTTAGTGAACTTGTAGAGAAAGGTAATCTA CTAGAGTTAAGTAGGAATTTTGGATTAGATTATGATTATGAGGATATCATACCTTCTATTCGCGAGGAAATAGAGTACAA TAAAAAAAAGTATTTGCTTCCATCTTTTTGTGATGGCCATCTCTTATTTTACAGAAAATCAGAGATTAAGGAAAACCTGG CTGAGAGAATAACAATTGATGAGTTAATCAAGATTGTTGAGAACAATACTGATAATCAGAAAAACACTTTTGTTTTAAAA GCTCATCCCTCAGAAATATTTTTAGATTTGTTACCATACTTACGTAATGAAGGAATAGATGCCTTTGATAATGATGGTAA CCCCCTTTTTGATAATCAAAAAGGGTATTCTGCTCTCCAAAAGTATATTTATATGAAACAATATTCTCCGAAGAATGTAG ATGAATTTGGTAATGAAGAAGTATTAAACGCAATTCAAAAAGATAAATGCAAATTGGGTGTTTCCTGGAGTGGTCAGCTT GGACAAATTATGAATGACCAGTGTATTAATCCAGAGGATATAGGTTTTATTTCATTAGAAACTTCCTGGAATACAACTTG GTCTTTTGGAATAAACCATTTATGTCAAGATCAGTTTTTAGCTGAAAGATTTTTGCAGTTTATAACATCTAAAGAGGTAG ACAAAGCAGTAGGTGCTTATTGTGGTAATCCTACGCGCAATTCAAGTTTTGAAGAGGAGAAAGAAAAATACAGATGGTAT CCAGTACTACAAAATATGCTTGAAAGGTCAAAACCTCTACCTCATTTGACAGTTACAGGACAATTAATAAGTATTACCAC TAAAGAAATTGTTAAGGCTTTTAGACATATAATTAGTCCTCAGGAAGCTTTGAGAAATGCTGCCAATATAATCAGGGAGG TTGTTTAA
Upstream 100 bases:
>100_bases CTGAAAAGGGTATTGTTATGCAACCATATAAAGAAAGTTTGAAAAAGTTATTTGAATAATACAATAAAAAAGAGAAACAA CGGGGAGTGTAAGAAAATTA
Downstream 100 bases:
>100_bases ATGGGGAACTATAAACCATTAACAAAACGGGAAGCTATCGAATACGTTAAACAGGTGCAAGGAATATTTTCTGATAATGC TGATTTAGAATGTGAAGAAA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MEKQLKVLAVGDPAVYVYVDDKYNFLKEFTKETGVKIYFDIVKWVDYYPTLINSFREYKYDIVMVAGHLWVSELVEKGNL LELSRNFGLDYDYEDIIPSIREEIEYNKKKYLLPSFCDGHLLFYRKSEIKENLAERITIDELIKIVENNTDNQKNTFVLK AHPSEIFLDLLPYLRNEGIDAFDNDGNPLFDNQKGYSALQKYIYMKQYSPKNVDEFGNEEVLNAIQKDKCKLGVSWSGQL GQIMNDQCINPEDIGFISLETSWNTTWSFGINHLCQDQFLAERFLQFITSKEVDKAVGAYCGNPTRNSSFEEEKEKYRWY PVLQNMLERSKPLPHLTVTGQLISITTKEIVKAFRHIISPQEALRNAANIIREVV
Sequences:
>Translated_375_residues MEKQLKVLAVGDPAVYVYVDDKYNFLKEFTKETGVKIYFDIVKWVDYYPTLINSFREYKYDIVMVAGHLWVSELVEKGNL LELSRNFGLDYDYEDIIPSIREEIEYNKKKYLLPSFCDGHLLFYRKSEIKENLAERITIDELIKIVENNTDNQKNTFVLK AHPSEIFLDLLPYLRNEGIDAFDNDGNPLFDNQKGYSALQKYIYMKQYSPKNVDEFGNEEVLNAIQKDKCKLGVSWSGQL GQIMNDQCINPEDIGFISLETSWNTTWSFGINHLCQDQFLAERFLQFITSKEVDKAVGAYCGNPTRNSSFEEEKEKYRWY PVLQNMLERSKPLPHLTVTGQLISITTKEIVKAFRHIISPQEALRNAANIIREVV >Mature_375_residues MEKQLKVLAVGDPAVYVYVDDKYNFLKEFTKETGVKIYFDIVKWVDYYPTLINSFREYKYDIVMVAGHLWVSELVEKGNL LELSRNFGLDYDYEDIIPSIREEIEYNKKKYLLPSFCDGHLLFYRKSEIKENLAERITIDELIKIVENNTDNQKNTFVLK AHPSEIFLDLLPYLRNEGIDAFDNDGNPLFDNQKGYSALQKYIYMKQYSPKNVDEFGNEEVLNAIQKDKCKLGVSWSGQL GQIMNDQCINPEDIGFISLETSWNTTWSFGINHLCQDQFLAERFLQFITSKEVDKAVGAYCGNPTRNSSFEEEKEKYRWY PVLQNMLERSKPLPHLTVTGQLISITTKEIVKAFRHIISPQEALRNAANIIREVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43712; Mature: 43712
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQLKVLAVGDPAVYVYVDDKYNFLKEFTKETGVKIYFDIVKWVDYYPTLINSFREYKY CCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCC DIVMVAGHLWVSELVEKGNLLELSRNFGLDYDYEDIIPSIREEIEYNKKKYLLPSFCDGH EEEEEEHHHHHHHHHCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC LLFYRKSEIKENLAERITIDELIKIVENNTDNQKNTFVLKAHPSEIFLDLLPYLRNEGID EEEEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCC AFDNDGNPLFDNQKGYSALQKYIYMKQYSPKNVDEFGNEEVLNAIQKDKCKLGVSWSGQL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHEECCCCCCCH GQIMNDQCINPEDIGFISLETSWNTTWSFGINHLCQDQFLAERFLQFITSKEVDKAVGAY HHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGNPTRNSSFEEEKEKYRWYPVLQNMLERSKPLPHLTVTGQLISITTKEIVKAFRHIISP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEHHHHHHHHHHHHHCCH QEALRNAANIIREVV HHHHHHHHHHHHHHC >Mature Secondary Structure MEKQLKVLAVGDPAVYVYVDDKYNFLKEFTKETGVKIYFDIVKWVDYYPTLINSFREYKY CCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHCC DIVMVAGHLWVSELVEKGNLLELSRNFGLDYDYEDIIPSIREEIEYNKKKYLLPSFCDGH EEEEEEHHHHHHHHHCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC LLFYRKSEIKENLAERITIDELIKIVENNTDNQKNTFVLKAHPSEIFLDLLPYLRNEGID EEEEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCC AFDNDGNPLFDNQKGYSALQKYIYMKQYSPKNVDEFGNEEVLNAIQKDKCKLGVSWSGQL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHEECCCCCCCH GQIMNDQCINPEDIGFISLETSWNTTWSFGINHLCQDQFLAERFLQFITSKEVDKAVGAY HHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGNPTRNSSFEEEKEKYRWYPVLQNMLERSKPLPHLTVTGQLISITTKEIVKAFRHIISP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEHHHHHHHHHHHHHCCH QEALRNAANIIREVV HHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA