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The map label for this gene is rbsC [H]

Identifier: 160902111

GI number: 160902111

Start: 688216

End: 689214

Strand: Direct

Name: rbsC [H]

Synonym: Pmob_0638

Alternate gene names: 160902111

Gene position: 688216-689214 (Clockwise)

Preceding gene: 160902110

Following gene: 160902112

Centisome position: 31.72

GC content: 33.53

Gene sequence:

>999_bases
ATGAATAATACAAAAGAAAAAAAATTTGACTTATTTTTATTTTTATACAAATATGGAACAATTATTGTTATAGTAGCAAC
AATACTTTTTTTTTCAATTACTCTTGATAATTTCCTGAACTTTACTAACGTAACAAACATTTTAAGATCTATATCTATTG
TTGCTTTAATCGCATTAGCTGTTACTATATCTCTTACCATCAATGGATTTGATTTATCTGTAGGAGCTATTGCTGGTTTC
GCTTCTGTTATAGCAGCAAAAATTATGGTAATTTGGGGAATGGGTCCTGTGCCAGCTATTATTGTTCCCTTGATTGTCGG
TGCATTAATAGGTGCAATTAATGCCTTTTTGATAATAAAAATGAAAATCCCAGATTTGCTTACAACCCTTTCCATGATGT
TTCTTTTAACAGGAATATCCATAACCTTTCAAAGTGGATCAGCAATCTATAATTATATGCCTTTACCTAATAACGCTGGT
ATAGCGCCAGGAATTATGAGCGAAGCTTACTTGTTTATCGGCCGAGGGGAATTATTTCACATTCCAGTTCCTGTTATTAT
TATGCTTTCTGTGGTTATCCTGGTACATATATTCTTGAATCTAACTAAATATGGCAGATTCTTATATATGATAGGTGGAA
ATGAAGAGGCTGCCAGATTATCGGGGATTAATACTAACAAATATAAATTAATCGCCTATATGTTGTCTGGTTTAATTGCA
GCTTTAGGTGGACTTGTATTAGGTGCTAGATTAGGATCTGGAGAGGTTGACGCAGGAAGTCCGTATTTAATGGACGCAGT
AGCTGCTGCCTACATTGGGTTTTCAGTATTTGGTGCCGGAAAACCTAATGCTTTTGGAACATTATTGGGAGCATTATTAA
TGGGAACTCTTTTAAATGGGCTAATTATGATGGATTTCCCTTATTATTCTCAGGATATTGTAAAAGGTATTGTTTTAATT
CTTGCCTTGACTCTTACTTATTATAGGCAAAAGAAGTAA

Upstream 100 bases:

>100_bases
AGAATTTATGTAATGTATAACGGTACAGTAGTAAAAGAATTAGTAACAAAAGATACTACAGAAGAAGAATTACTTTACTA
CGCTGCTGGAGGTGGACTAG

Downstream 100 bases:

>100_bases
AATTATAACCGGGCGGAGCCCTCCGCAACCAATACAAACTGGCTGCTGGGTGAAGGGGCTATAAAAAAGATTCTATGTAA
CTTAGAATGATGTAGGTATT

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MNNTKEKKFDLFLFLYKYGTIIVIVATILFFSITLDNFLNFTNVTNILRSISIVALIALAVTISLTINGFDLSVGAIAGF
ASVIAAKIMVIWGMGPVPAIIVPLIVGALIGAINAFLIIKMKIPDLLTTLSMMFLLTGISITFQSGSAIYNYMPLPNNAG
IAPGIMSEAYLFIGRGELFHIPVPVIIMLSVVILVHIFLNLTKYGRFLYMIGGNEEAARLSGINTNKYKLIAYMLSGLIA
ALGGLVLGARLGSGEVDAGSPYLMDAVAAAYIGFSVFGAGKPNAFGTLLGALLMGTLLNGLIMMDFPYYSQDIVKGIVLI
LALTLTYYRQKK

Sequences:

>Translated_332_residues
MNNTKEKKFDLFLFLYKYGTIIVIVATILFFSITLDNFLNFTNVTNILRSISIVALIALAVTISLTINGFDLSVGAIAGF
ASVIAAKIMVIWGMGPVPAIIVPLIVGALIGAINAFLIIKMKIPDLLTTLSMMFLLTGISITFQSGSAIYNYMPLPNNAG
IAPGIMSEAYLFIGRGELFHIPVPVIIMLSVVILVHIFLNLTKYGRFLYMIGGNEEAARLSGINTNKYKLIAYMLSGLIA
ALGGLVLGARLGSGEVDAGSPYLMDAVAAAYIGFSVFGAGKPNAFGTLLGALLMGTLLNGLIMMDFPYYSQDIVKGIVLI
LALTLTYYRQKK
>Mature_332_residues
MNNTKEKKFDLFLFLYKYGTIIVIVATILFFSITLDNFLNFTNVTNILRSISIVALIALAVTISLTINGFDLSVGAIAGF
ASVIAAKIMVIWGMGPVPAIIVPLIVGALIGAINAFLIIKMKIPDLLTTLSMMFLLTGISITFQSGSAIYNYMPLPNNAG
IAPGIMSEAYLFIGRGELFHIPVPVIIMLSVVILVHIFLNLTKYGRFLYMIGGNEEAARLSGINTNKYKLIAYMLSGLIA
ALGGLVLGARLGSGEVDAGSPYLMDAVAAAYIGFSVFGAGKPNAFGTLLGALLMGTLLNGLIMMDFPYYSQDIVKGIVLI
LALTLTYYRQKK

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=324, Percent_Identity=34.8765432098765, Blast_Score=161, Evalue=7e-41,
Organism=Escherichia coli, GI1789992, Length=379, Percent_Identity=31.6622691292876, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI145693152, Length=338, Percent_Identity=28.1065088757396, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1790524, Length=330, Percent_Identity=30.9090909090909, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1788896, Length=330, Percent_Identity=28.4848484848485, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI87082395, Length=276, Percent_Identity=31.8840579710145, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788471, Length=346, Percent_Identity=32.0809248554913, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787793, Length=314, Percent_Identity=26.7515923566879, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787794, Length=283, Percent_Identity=26.8551236749117, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI145693214, Length=280, Percent_Identity=28.9285714285714, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35665; Mature: 35665

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTKEKKFDLFLFLYKYGTIIVIVATILFFSITLDNFLNFTNVTNILRSISIVALIALA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTISLTINGFDLSVGAIAGFASVIAAKIMVIWGMGPVPAIIVPLIVGALIGAINAFLIIK
HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEE
MKIPDLLTTLSMMFLLTGISITFQSGSAIYNYMPLPNNAGIAPGIMSEAYLFIGRGELFH
ECCHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHEEEEECCCEEE
IPVPVIIMLSVVILVHIFLNLTKYGRFLYMIGGNEEAARLSGINTNKYKLIAYMLSGLIA
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHH
ALGGLVLGARLGSGEVDAGSPYLMDAVAAAYIGFSVFGAGKPNAFGTLLGALLMGTLLNG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
LIMMDFPYYSQDIVKGIVLILALTLTYYRQKK
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNTKEKKFDLFLFLYKYGTIIVIVATILFFSITLDNFLNFTNVTNILRSISIVALIALA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTISLTINGFDLSVGAIAGFASVIAAKIMVIWGMGPVPAIIVPLIVGALIGAINAFLIIK
HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEE
MKIPDLLTTLSMMFLLTGISITFQSGSAIYNYMPLPNNAGIAPGIMSEAYLFIGRGELFH
ECCHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCHHHHHEEEEECCCEEE
IPVPVIIMLSVVILVHIFLNLTKYGRFLYMIGGNEEAARLSGINTNKYKLIAYMLSGLIA
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHH
ALGGLVLGARLGSGEVDAGSPYLMDAVAAAYIGFSVFGAGKPNAFGTLLGALLMGTLLNG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
LIMMDFPYYSQDIVKGIVLILALTLTYYRQKK
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]