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The map label for this gene is fliD [H]

Identifier: 160901837

GI number: 160901837

Start: 374494

End: 376002

Strand: Direct

Name: fliD [H]

Synonym: Pmob_0353

Alternate gene names: 160901837

Gene position: 374494-376002 (Clockwise)

Preceding gene: 160901824

Following gene: 160901847

Centisome position: 17.26

GC content: 35.39

Gene sequence:

>1509_bases
ATGGATAGCAATCCTTATGTTGGTACTTTTCAATTAACCGGCGCCGTTTCCGGAATGGATACACAAGCAATGGTGCAAAA
ATTAATGGAAGTAGAACAACAACCTTTAAATAGAACTCAAGAAAAATTTAATACCCTAACCTACAAACAAAATCTTTGGA
TGGAAGTTGACAACAAATTGGAGGATTTTTATGATTATTTGATCACTTTCAAATTGAAGAGTAATTTGATCCCAAAAAGT
GCCACTTCTTCCGACGAAAGTGTACTAACCGCTACAGCTCCTGCAGATGCCGATAATTCAACTTTTTACCTGAAAGTTAA
TTCTTTGGCTTCTCCTACCGTTCTTTTGGGGGAAAATATTGATTCAACGATTAAAAAAAGTTCAACGATAGGGGATGTTA
TAGGTACAACAGGTGATTCAACTTTTACCATCACAAAAGGAACTAATTCTGATACTATAACTGTTTCAGACAGTGAAACA
ATACAAAACCTCATAGACAAAATAAATGCTTCAATCTTGGGAGTAGAAGCAAAATTTGACGATGCGAACGGTAAATTTTT
TATAGTCAACAAAGAAAATGGGAGTATTGATATCAGTGTATCTGCCACTTCGGGTTCTAATGGTGAAACCTTAATTACGG
CACTGAATTTAAACGGAACAGCTACAGCAGACAGTGATAATACCGTTATGACCCTGGGAAGTTTGGGACAGGTTGAATTG
TCTTTTGATGGAAGTACAACTATCACCACTTATGACAACTTGACAGAAAACACTTTGAACATTTTCGGTACAACAATCGA
TTTAAAATCAACCTCTAGTGGTTACGTAAAAGTTTCTATAGAACAAGACATAGATAAGAGTGTTGAAAGTATAAAAGAAT
TTGTCGATAAGTACAACGAAACGATTACTTATGTATACGATTTATTGCATGAAGACCAAGTTACCGATAAACCTACAGAA
GAGATGACAGAAGAGGATTATATGAAAGGGATGCTAAAAGGAGATAATAACCTAGAGAAAATATTTTATAATTTAAGAAA
TATGGTTTACTCACCTGTAGATATAGAACAGTCTGGTTCTCAATATAATGCGCTTTTTGATATTGGCATAACCTCAGGAG
ATTTAGGGGCTGGTTATGAGAATACAATGAAAGGACTATTGAGCGTCGATGAAGATAAACTTAGAGAGGCTTTGAATACT
AATGCTGAAGATGTTTGGAAGTTGTTTGCAACAAACGATACAACTAATAAAGAATATGGTTACGCTCAATCTGTTCAGAA
TTATTTGTATGAAGTAACTAAGTTCAATGGCTATATAGATCAAATTGCCGGAACGAACGGCACCATAGGTAACGAGATGA
GACGACTAGCAAATGAAATGACCAACCTATTAGACAGGCTTCAAAGAAAAGAAGCACAATATTATGCCCAGTTCTCAGCT
ATGGAACAAGCCATTCAACAATTGAACGCACAAGGATTGTACATACAAAACGCTTTTTCTAACCAATAG

Upstream 100 bases:

>100_bases
AATTAAATGAATCAATAGTATGACCAAATTATTCGTTAAAGTTTTCTTAAGATAAGTCGATAATGAATAGGTAAGAAAGA
ATGTAAAGGAAGTGAAGACT

Downstream 100 bases:

>100_bases
ATAAATCAATAACCGGTACTGTTTTAAAACAGTACCGGTTATTTTATTTTTACTATTTTTATTTTTTTACCCGACAGATT
TTTCTTGTGCAGCTTCAGCT

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MDSNPYVGTFQLTGAVSGMDTQAMVQKLMEVEQQPLNRTQEKFNTLTYKQNLWMEVDNKLEDFYDYLITFKLKSNLIPKS
ATSSDESVLTATAPADADNSTFYLKVNSLASPTVLLGENIDSTIKKSSTIGDVIGTTGDSTFTITKGTNSDTITVSDSET
IQNLIDKINASILGVEAKFDDANGKFFIVNKENGSIDISVSATSGSNGETLITALNLNGTATADSDNTVMTLGSLGQVEL
SFDGSTTITTYDNLTENTLNIFGTTIDLKSTSSGYVKVSIEQDIDKSVESIKEFVDKYNETITYVYDLLHEDQVTDKPTE
EMTEEDYMKGMLKGDNNLEKIFYNLRNMVYSPVDIEQSGSQYNALFDIGITSGDLGAGYENTMKGLLSVDEDKLREALNT
NAEDVWKLFATNDTTNKEYGYAQSVQNYLYEVTKFNGYIDQIAGTNGTIGNEMRRLANEMTNLLDRLQRKEAQYYAQFSA
MEQAIQQLNAQGLYIQNAFSNQ

Sequences:

>Translated_502_residues
MDSNPYVGTFQLTGAVSGMDTQAMVQKLMEVEQQPLNRTQEKFNTLTYKQNLWMEVDNKLEDFYDYLITFKLKSNLIPKS
ATSSDESVLTATAPADADNSTFYLKVNSLASPTVLLGENIDSTIKKSSTIGDVIGTTGDSTFTITKGTNSDTITVSDSET
IQNLIDKINASILGVEAKFDDANGKFFIVNKENGSIDISVSATSGSNGETLITALNLNGTATADSDNTVMTLGSLGQVEL
SFDGSTTITTYDNLTENTLNIFGTTIDLKSTSSGYVKVSIEQDIDKSVESIKEFVDKYNETITYVYDLLHEDQVTDKPTE
EMTEEDYMKGMLKGDNNLEKIFYNLRNMVYSPVDIEQSGSQYNALFDIGITSGDLGAGYENTMKGLLSVDEDKLREALNT
NAEDVWKLFATNDTTNKEYGYAQSVQNYLYEVTKFNGYIDQIAGTNGTIGNEMRRLANEMTNLLDRLQRKEAQYYAQFSA
MEQAIQQLNAQGLYIQNAFSNQ
>Mature_502_residues
MDSNPYVGTFQLTGAVSGMDTQAMVQKLMEVEQQPLNRTQEKFNTLTYKQNLWMEVDNKLEDFYDYLITFKLKSNLIPKS
ATSSDESVLTATAPADADNSTFYLKVNSLASPTVLLGENIDSTIKKSSTIGDVIGTTGDSTFTITKGTNSDTITVSDSET
IQNLIDKINASILGVEAKFDDANGKFFIVNKENGSIDISVSATSGSNGETLITALNLNGTATADSDNTVMTLGSLGQVEL
SFDGSTTITTYDNLTENTLNIFGTTIDLKSTSSGYVKVSIEQDIDKSVESIKEFVDKYNETITYVYDLLHEDQVTDKPTE
EMTEEDYMKGMLKGDNNLEKIFYNLRNMVYSPVDIEQSGSQYNALFDIGITSGDLGAGYENTMKGLLSVDEDKLREALNT
NAEDVWKLFATNDTTNKEYGYAQSVQNYLYEVTKFNGYIDQIAGTNGTIGNEMRRLANEMTNLLDRLQRKEAQYYAQFSA
MEQAIQQLNAQGLYIQNAFSNQ

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=380, Percent_Identity=25.7894736842105, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 55510; Mature: 55510

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNPYVGTFQLTGAVSGMDTQAMVQKLMEVEQQPLNRTQEKFNTLTYKQNLWMEVDNKL
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHH
EDFYDYLITFKLKSNLIPKSATSSDESVLTATAPADADNSTFYLKVNSLASPTVLLGENI
HHHHHHHEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEECCCC
DSTIKKSSTIGDVIGTTGDSTFTITKGTNSDTITVSDSETIQNLIDKINASILGVEAKFD
HHHHHHCCCHHHHHCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHCCEEEEEEEEEE
DANGKFFIVNKENGSIDISVSATSGSNGETLITALNLNGTATADSDNTVMTLGSLGQVEL
CCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEECCCCEECCCCCCEEEECCCCEEEE
SFDGSTTITTYDNLTENTLNIFGTTIDLKSTSSGYVKVSIEQDIDKSVESIKEFVDKYNE
EECCCEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
TITYVYDLLHEDQVTDKPTEEMTEEDYMKGMLKGDNNLEKIFYNLRNMVYSPVDIEQSGS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
QYNALFDIGITSGDLGAGYENTMKGLLSVDEDKLREALNTNAEDVWKLFATNDTTNKEYG
CEEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHEEEECCCCCCCCCC
YAQSVQNYLYEVTKFNGYIDQIAGTNGTIGNEMRRLANEMTNLLDRLQRKEAQYYAQFSA
HHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEQAIQQLNAQGLYIQNAFSNQ
HHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MDSNPYVGTFQLTGAVSGMDTQAMVQKLMEVEQQPLNRTQEKFNTLTYKQNLWMEVDNKL
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHH
EDFYDYLITFKLKSNLIPKSATSSDESVLTATAPADADNSTFYLKVNSLASPTVLLGENI
HHHHHHHEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEECCCC
DSTIKKSSTIGDVIGTTGDSTFTITKGTNSDTITVSDSETIQNLIDKINASILGVEAKFD
HHHHHHCCCHHHHHCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHCCEEEEEEEEEE
DANGKFFIVNKENGSIDISVSATSGSNGETLITALNLNGTATADSDNTVMTLGSLGQVEL
CCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEECCCCEECCCCCCEEEECCCCEEEE
SFDGSTTITTYDNLTENTLNIFGTTIDLKSTSSGYVKVSIEQDIDKSVESIKEFVDKYNE
EECCCEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
TITYVYDLLHEDQVTDKPTEEMTEEDYMKGMLKGDNNLEKIFYNLRNMVYSPVDIEQSGS
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
QYNALFDIGITSGDLGAGYENTMKGLLSVDEDKLREALNTNAEDVWKLFATNDTTNKEYG
CEEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHEEEECCCCCCCCCC
YAQSVQNYLYEVTKFNGYIDQIAGTNGTIGNEMRRLANEMTNLLDRLQRKEAQYYAQFSA
HHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEQAIQQLNAQGLYIQNAFSNQ
HHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]