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The map label for this gene is whiA [H]

Identifier: 160901645

GI number: 160901645

Start: 157821

End: 158741

Strand: Direct

Name: whiA [H]

Synonym: Pmob_0156

Alternate gene names: 160901645

Gene position: 157821-158741 (Clockwise)

Preceding gene: 160901644

Following gene: 160901646

Centisome position: 7.27

GC content: 27.69

Gene sequence:

>921_bases
ATGCGTTCTATGAATTCATTTTCAGAAGCTTTAAAATTAAGCCTAGTGAACAGTGATTACATTTTCCCAGAGGCTGAGTT
CTATGGTTTTTTCATAGGAAAAGGTGAAATTATTGAAAAAGAAACTGAAAAATTAATAAAAATATCCATAACATCTTTGA
ATAGTTTTAAAAGATTATACAAACTGTGCAAATTTTCTTTCACAGAAAAATTTGAAGTAAAATTTAACAACGAAAAAAGG
TTAAATCTTGGTGGAACAGGTTCTATATTCTTAAACTATCAAACGATATATAAAATATTAAAGAAAAACAACCTTTATCT
AAATGAAACTAAATTTTCCCCACCTTTAAAAAAAGATCCAGTAATTTTTGGATCTTTTATTAAAGGTTTATTGTTGTCTT
GTGGATCTATATCAGTAAAAGAATCCTATCATTTAGAATTTAATTTGAAAACTAACAATGTATTTAAAGAGGATTTAGTT
AGAACATTTAAGAATCTTTTAGGGGTAAATGCCAGATTTTTAAATAGAAGTAAGGGCTCTAAAGTATACATAAAATCACG
CGATGACATTTTGAATATCCTTGAGCTTCTCAACGCCAAAGAAAAAGTAAAAGAACTAAGTGAATTAATGGATATAAGGG
ATTTACGTAGCAACGTCACAAGGACTATTAATTTAATATCTGCTAATTCATCAAAAACGGCTCGTAGCTCAATAAAGCAA
ATTAACGATATACAAATTATTCAAGAAAGCATTGGTATAGATAGTTTACCAAATGACCTAAAACAAATTGCTGCTTTTAG
ATTAGAAAATGAAGATGCAAGTTTGAGTAACATGGCAGAATCTTTATCAATGAAAAAATCTACCTTGTACAACAAACTAA
AAAAAATCTCAAAAATTGCCGAATCTCTAAAAAATACCTAA

Upstream 100 bases:

>100_bases
AAGATAGAAGAGTAGTGGTATCTGATTTGGTTTATATTATAAACGATGAGGAACCGAAAATTAGACATGATCCAAAGAAA
ACATCAGAGTTGATTTTAAA

Downstream 100 bases:

>100_bases
TTTAGGTAAAATGGTGGTGCAATAATTATGAAATGTCCTTTCTGTGGTTACGAGGAAACTAAAGTTCTGGACTCAAGACC
AGTTAGTAACGGCACTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRSMNSFSEALKLSLVNSDYIFPEAEFYGFFIGKGEIIEKETEKLIKISITSLNSFKRLYKLCKFSFTEKFEVKFNNEKR
LNLGGTGSIFLNYQTIYKILKKNNLYLNETKFSPPLKKDPVIFGSFIKGLLLSCGSISVKESYHLEFNLKTNNVFKEDLV
RTFKNLLGVNARFLNRSKGSKVYIKSRDDILNILELLNAKEKVKELSELMDIRDLRSNVTRTINLISANSSKTARSSIKQ
INDIQIIQESIGIDSLPNDLKQIAAFRLENEDASLSNMAESLSMKKSTLYNKLKKISKIAESLKNT

Sequences:

>Translated_306_residues
MRSMNSFSEALKLSLVNSDYIFPEAEFYGFFIGKGEIIEKETEKLIKISITSLNSFKRLYKLCKFSFTEKFEVKFNNEKR
LNLGGTGSIFLNYQTIYKILKKNNLYLNETKFSPPLKKDPVIFGSFIKGLLLSCGSISVKESYHLEFNLKTNNVFKEDLV
RTFKNLLGVNARFLNRSKGSKVYIKSRDDILNILELLNAKEKVKELSELMDIRDLRSNVTRTINLISANSSKTARSSIKQ
INDIQIIQESIGIDSLPNDLKQIAAFRLENEDASLSNMAESLSMKKSTLYNKLKKISKIAESLKNT
>Mature_306_residues
MRSMNSFSEALKLSLVNSDYIFPEAEFYGFFIGKGEIIEKETEKLIKISITSLNSFKRLYKLCKFSFTEKFEVKFNNEKR
LNLGGTGSIFLNYQTIYKILKKNNLYLNETKFSPPLKKDPVIFGSFIKGLLLSCGSISVKESYHLEFNLKTNNVFKEDLV
RTFKNLLGVNARFLNRSKGSKVYIKSRDDILNILELLNAKEKVKELSELMDIRDLRSNVTRTINLISANSSKTARSSIKQ
INDIQIIQESIGIDSLPNDLKQIAAFRLENEDASLSNMAESLSMKKSTLYNKLKKISKIAESLKNT

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004042
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 34985; Mature: 34985

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSMNSFSEALKLSLVNSDYIFPEAEFYGFFIGKGEIIEKETEKLIKISITSLNSFKRLY
CCCHHHHHHHHHHHEECCCCCCCCHHHEEEEECCCCCHHHHHHHEEEHHHHHHHHHHHHH
KLCKFSFTEKFEVKFNNEKRLNLGGTGSIFLNYQTIYKILKKNNLYLNETKFSPPLKKDP
HHHHCCCCCEEEEEECCCEEEECCCCCEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCC
VIFGSFIKGLLLSCGSISVKESYHLEFNLKTNNVFKEDLVRTFKNLLGVNARFLNRSKGS
CHHHHHHHHHHHCCCCEEECCEEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCC
KVYIKSRDDILNILELLNAKEKVKELSELMDIRDLRSNVTRTINLISANSSKTARSSIKQ
EEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHH
INDIQIIQESIGIDSLPNDLKQIAAFRLENEDASLSNMAESLSMKKSTLYNKLKKISKIA
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLKNT
HHHCCC
>Mature Secondary Structure
MRSMNSFSEALKLSLVNSDYIFPEAEFYGFFIGKGEIIEKETEKLIKISITSLNSFKRLY
CCCHHHHHHHHHHHEECCCCCCCCHHHEEEEECCCCCHHHHHHHEEEHHHHHHHHHHHHH
KLCKFSFTEKFEVKFNNEKRLNLGGTGSIFLNYQTIYKILKKNNLYLNETKFSPPLKKDP
HHHHCCCCCEEEEEECCCEEEECCCCCEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCC
VIFGSFIKGLLLSCGSISVKESYHLEFNLKTNNVFKEDLVRTFKNLLGVNARFLNRSKGS
CHHHHHHHHHHHCCCCEEECCEEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCC
KVYIKSRDDILNILELLNAKEKVKELSELMDIRDLRSNVTRTINLISANSSKTARSSIKQ
EEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHH
INDIQIIQESIGIDSLPNDLKQIAAFRLENEDASLSNMAESLSMKKSTLYNKLKKISKIA
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLKNT
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA