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The map label for this gene is rhaB [H]

Identifier: 160901623

GI number: 160901623

Start: 134286

End: 135743

Strand: Direct

Name: rhaB [H]

Synonym: Pmob_0133

Alternate gene names: 160901623

Gene position: 134286-135743 (Clockwise)

Preceding gene: 160901622

Following gene: 160901624

Centisome position: 6.19

GC content: 34.29

Gene sequence:

>1458_bases
TTGAAATATCTACACTTAGCTATCGACCTCGGAGCGTCAGGTGGAAAAGTAATGGCAGGTAACATACAGAATGACAAACT
TATCTTGAGTGAAGTAAACCGTTTTTCAAACTCCCCGGTTGAAATAAATGGAATATCTTATTGGAATATCTTGAATCTGT
ATGATCATATAATTGAGAGCATTCACATAGCTCAAAAAAATGATCAAAAGATACTGTCTTTAGGTATAGATAGTTGGGGA
GTGGACTTCGGACTTTTAAACAAAAACGGTTATTTAATAAACAATCCAATTCATTACAGAAATATGTTTAAAACGAATAT
AATGCAAGAGACAATAGAAAAGGTTGGCAAGAAATGGATATATGAACACTCCCCAACACAGTTTCAACCGTTCAATACAT
TGTACCAAATATTAGCCTACCAAAAATATGCTCCAGATTTTGTCAAAATCTCAAAAGACCTATTGATGATCCCTTCGTTG
CTAAATTATTTTTTAACAGGTGAAAAAGCTATTGATTTTACAATGGCTACAACTACTCAAATTTATAATCATAGAAAAAG
AAAATGGGACGAAGAAATAATGAAAAAGTTTGACATTCCTGATATATTACCTGAAATAGTCCCTGCTGGTACAAAAATTG
GTAAAATAAAAAAAGATGTGTTAAATAATAATTCAAACATAGATGTTATTCTGCCAGCAAGTCATGATACAGGATCCGCA
TATGCCGCAATTGCTTCAGATCCCCAAGATACCTTGTATATTAGTTTAGGAACATGGTGCTTGACTGGCGCTATTATCAA
GGAGGTCCCCTACAACGAAGAACTCATGGAAAACAATTTAGCCGCAGAGGGTTGTTTGGATGGATCCTTTAGAATATTGG
CAAACGTAACAGGGATGTGGTTAATTCAGGGGATTATAAAAAGTCTTAACTTGCCGGATAACAGCGATACTTATCAAAAA
ATTACAGATATGGCACAGAATGCAAAACCATTTTCTTCTTATATCAATGTAGACGATCCTTCTTTACAAAACCCTCAAGA
CATGATTCAAGCAATAATTCAGCAGTCTATAAAAGATAACGATACTGTTTTAAATGAAACATCTCAAGTCATAAGAACGG
CATTGGAAGGAATTGCCTTCAAAGTAAATGAAGTTAAAGAAAAACTATCAAAGATTTTGAATATTGATTTTAAAAGGGTT
CATGCGGTAGGTGGAGGTACCAGGAATAAATTACTCTGTCAATTAATCGCAGATGCAACAGGACTAACTGTTCTAACTGG
ACCCATTGAAGGAACGGCAGTAGGGAATTTAGTTTCCCAGCTATATGCCTTACAATTTGTAAAAAACTTTGAAGAGGCAC
GGAACTTAATAAAAAGATCTTTCGACTTTCAAATTTTTGAACCTAAAGAACATGATATCTGGAAAGAGGCTTTTGCTTCT
TTTCAAAAGCAGAAATGA

Upstream 100 bases:

>100_bases
TACAAATGGATGCAAGAGGTAAAAGAAACGCTTGACCCTAATAACATTATGAACCCAGGGAAGTTATTCTAAAAAAATTT
TCAAAGAAAAGGTGATAATT

Downstream 100 bases:

>100_bases
TATAATTAATACAACCAAAAGACTGCCTCTTATACTCTCTTGGTTTATTATGAGAATAGATTTCAAGTTTTTTCAAGAAA
GTAATAAAATGATGAATATT

Product: carbohydrate kinase FGGY

Products: NA

Alternate protein names: Rhamnulose kinase [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MKYLHLAIDLGASGGKVMAGNIQNDKLILSEVNRFSNSPVEINGISYWNILNLYDHIIESIHIAQKNDQKILSLGIDSWG
VDFGLLNKNGYLINNPIHYRNMFKTNIMQETIEKVGKKWIYEHSPTQFQPFNTLYQILAYQKYAPDFVKISKDLLMIPSL
LNYFLTGEKAIDFTMATTTQIYNHRKRKWDEEIMKKFDIPDILPEIVPAGTKIGKIKKDVLNNNSNIDVILPASHDTGSA
YAAIASDPQDTLYISLGTWCLTGAIIKEVPYNEELMENNLAAEGCLDGSFRILANVTGMWLIQGIIKSLNLPDNSDTYQK
ITDMAQNAKPFSSYINVDDPSLQNPQDMIQAIIQQSIKDNDTVLNETSQVIRTALEGIAFKVNEVKEKLSKILNIDFKRV
HAVGGGTRNKLLCQLIADATGLTVLTGPIEGTAVGNLVSQLYALQFVKNFEEARNLIKRSFDFQIFEPKEHDIWKEAFAS
FQKQK

Sequences:

>Translated_485_residues
MKYLHLAIDLGASGGKVMAGNIQNDKLILSEVNRFSNSPVEINGISYWNILNLYDHIIESIHIAQKNDQKILSLGIDSWG
VDFGLLNKNGYLINNPIHYRNMFKTNIMQETIEKVGKKWIYEHSPTQFQPFNTLYQILAYQKYAPDFVKISKDLLMIPSL
LNYFLTGEKAIDFTMATTTQIYNHRKRKWDEEIMKKFDIPDILPEIVPAGTKIGKIKKDVLNNNSNIDVILPASHDTGSA
YAAIASDPQDTLYISLGTWCLTGAIIKEVPYNEELMENNLAAEGCLDGSFRILANVTGMWLIQGIIKSLNLPDNSDTYQK
ITDMAQNAKPFSSYINVDDPSLQNPQDMIQAIIQQSIKDNDTVLNETSQVIRTALEGIAFKVNEVKEKLSKILNIDFKRV
HAVGGGTRNKLLCQLIADATGLTVLTGPIEGTAVGNLVSQLYALQFVKNFEEARNLIKRSFDFQIFEPKEHDIWKEAFAS
FQKQK
>Mature_485_residues
MKYLHLAIDLGASGGKVMAGNIQNDKLILSEVNRFSNSPVEINGISYWNILNLYDHIIESIHIAQKNDQKILSLGIDSWG
VDFGLLNKNGYLINNPIHYRNMFKTNIMQETIEKVGKKWIYEHSPTQFQPFNTLYQILAYQKYAPDFVKISKDLLMIPSL
LNYFLTGEKAIDFTMATTTQIYNHRKRKWDEEIMKKFDIPDILPEIVPAGTKIGKIKKDVLNNNSNIDVILPASHDTGSA
YAAIASDPQDTLYISLGTWCLTGAIIKEVPYNEELMENNLAAEGCLDGSFRILANVTGMWLIQGIIKSLNLPDNSDTYQK
ITDMAQNAKPFSSYINVDDPSLQNPQDMIQAIIQQSIKDNDTVLNETSQVIRTALEGIAFKVNEVKEKLSKILNIDFKRV
HAVGGGTRNKLLCQLIADATGLTVLTGPIEGTAVGNLVSQLYALQFVKNFEEARNLIKRSFDFQIFEPKEHDIWKEAFAS
FQKQK

Specific function: Metabolism of L-rhamnose; second step. [C]

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnulokinase family [H]

Homologues:

Organism=Escherichia coli, GI1790338, Length=480, Percent_Identity=31.6666666666667, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1789168, Length=474, Percent_Identity=25.1054852320675, Blast_Score=108, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR013449 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.5 [H]

Molecular weight: Translated: 54705; Mature: 54705

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLHLAIDLGASGGKVMAGNIQNDKLILSEVNRFSNSPVEINGISYWNILNLYDHIIES
CCEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH
IHIAQKNDQKILSLGIDSWGVDFGLLNKNGYLINNPIHYRNMFKTNIMQETIEKVGKKWI
HHHCCCCCCEEEEECCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHE
YEHSPTQFQPFNTLYQILAYQKYAPDFVKISKDLLMIPSLLNYFLTGEKAIDFTMATTTQ
ECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHH
IYNHRKRKWDEEIMKKFDIPDILPEIVPAGTKIGKIKKDVLNNNSNIDVILPASHDTGSA
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCE
YAAIASDPQDTLYISLGTWCLTGAIIKEVPYNEELMENNLAAEGCLDGSFRILANVTGMW
EEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LIQGIIKSLNLPDNSDTYQKITDMAQNAKPFSSYINVDDPSLQNPQDMIQAIIQQSIKDN
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
DTVLNETSQVIRTALEGIAFKVNEVKEKLSKILNIDFKRVHAVGGGTRNKLLCQLIADAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHCCC
GLTVLTGPIEGTAVGNLVSQLYALQFVKNFEEARNLIKRSFDFQIFEPKEHDIWKEAFAS
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH
FQKQK
HHCCC
>Mature Secondary Structure
MKYLHLAIDLGASGGKVMAGNIQNDKLILSEVNRFSNSPVEINGISYWNILNLYDHIIES
CCEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH
IHIAQKNDQKILSLGIDSWGVDFGLLNKNGYLINNPIHYRNMFKTNIMQETIEKVGKKWI
HHHCCCCCCEEEEECCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHE
YEHSPTQFQPFNTLYQILAYQKYAPDFVKISKDLLMIPSLLNYFLTGEKAIDFTMATTTQ
ECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHH
IYNHRKRKWDEEIMKKFDIPDILPEIVPAGTKIGKIKKDVLNNNSNIDVILPASHDTGSA
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCE
YAAIASDPQDTLYISLGTWCLTGAIIKEVPYNEELMENNLAAEGCLDGSFRILANVTGMW
EEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LIQGIIKSLNLPDNSDTYQKITDMAQNAKPFSSYINVDDPSLQNPQDMIQAIIQQSIKDN
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
DTVLNETSQVIRTALEGIAFKVNEVKEKLSKILNIDFKRVHAVGGGTRNKLLCQLIADAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHCCC
GLTVLTGPIEGTAVGNLVSQLYALQFVKNFEEARNLIKRSFDFQIFEPKEHDIWKEAFAS
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH
FQKQK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]