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The map label for this gene is recA

Identifier: 160901572

GI number: 160901572

Start: 78364

End: 79470

Strand: Direct

Name: recA

Synonym: Pmob_0081

Alternate gene names: 160901572

Gene position: 78364-79470 (Clockwise)

Preceding gene: 160901571

Following gene: 160901573

Centisome position: 3.61

GC content: 35.05

Gene sequence:

>1107_bases
ATGGCTAAAAATGATTCTAAAGACGCAAATAAAGAAGAATTGTTAGAAAAGCTTGTTAAAGAGTTAGAAAAAAATCATGG
AACAGGATCAGTCATGTTAATGGGTAAGGGATTGGATAATAGCAACCTAGCCGTTGTCCCAAGTGGATGTTTATCGCTGG
ATATAGCTTTAGGAGTTGGTGGATATCCAAGAGGAAGAATTATAGAAATATACGGAAACGAATCATCAGGTAAAACTACT
CTCGCTCTTCATTCCTTAGCAGAAGTTCAAAAATTGAATGGGATAGTGGCTTTTGTTGATGCCGAACATGCTTTAGATGT
TGAATATGCAAGAAAGTTAGGTGTAGATGTCGACAAATTGATAGTTTCTCAACCGGATTATGGTGAACAAGCTCTTGAAA
TTGTAGACTCGCTGGTAAGATCTAACATAGTAGACCTAATTGTAGTAGACTCTGTAGCAGCTTTGGTACCGAAAGCAGAA
ATAGAAGGAGCTATGGGAGATTCTCACATGGGACTTCAGGCAAGGTTGATGTCTCAAGCTCTAAGAAAACTAGCTGGAAG
TATAAACAAATCCAAATCTATAGTAATATTTATAAACCAGGTAAGGATGAAAATAGGGGTAGTGTATGGTAACCCAGAAA
CTACCACTGGAGGAATTGCACTAAAATTTTATGCTACTATAAGGGTAGAAGTAAGAAAGGGCAATCCAATAAGAGAAGGA
AAAGATCAAATAGGGAATGAAACAACCTTAAAAGTCGTAAAAAATAAAGTTGCTCCACCATTTAAACAGGCAAATGTAGA
CATGATCTTTGGACGAGGTATCCCAAAAGAAAATGACATCTTTAACATAGCGGTAGAGGAAGAATTAATTCAAAGAAAAG
GTGCTTGGTTCTCTTTTATCAACGAAAATGGTGAAGAAATTAGTTTAGGACAGGGTAAAACCAATTCAGTTAGTTATCTC
ATGGAAAATCCTGACATACTTGATTATTTAGAATATACGATTCGTAAGAAACACAATTTAATTATTCCAGATTATTTGAT
AGAAAAGTTCGAGTCTAATTCATCAAAAGGGAAAAAAGTAAAAAGTGAAGAATTACAAGAAAATTGA

Upstream 100 bases:

>100_bases
TACGTAAATTCTATCGGAATATACTCTTCTGAACTCACAAGAAAAGGTCCAATATATAAAAAACTTTACACTATCGACTT
TGAAGGAGGCGTCATCATTA

Downstream 100 bases:

>100_bases
TCCAAAAGATGAGAAAGCAGCCGAAAAATCTGCGTTGAATTTAATAAAGTACCGTGCCAGGTCAGAAAAAGAGCTCTCAA
GCCGTCTAAAAGAAAAAGGC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MAKNDSKDANKEELLEKLVKELEKNHGTGSVMLMGKGLDNSNLAVVPSGCLSLDIALGVGGYPRGRIIEIYGNESSGKTT
LALHSLAEVQKLNGIVAFVDAEHALDVEYARKLGVDVDKLIVSQPDYGEQALEIVDSLVRSNIVDLIVVDSVAALVPKAE
IEGAMGDSHMGLQARLMSQALRKLAGSINKSKSIVIFINQVRMKIGVVYGNPETTTGGIALKFYATIRVEVRKGNPIREG
KDQIGNETTLKVVKNKVAPPFKQANVDMIFGRGIPKENDIFNIAVEEELIQRKGAWFSFINENGEEISLGQGKTNSVSYL
MENPDILDYLEYTIRKKHNLIIPDYLIEKFESNSSKGKKVKSEELQEN

Sequences:

>Translated_368_residues
MAKNDSKDANKEELLEKLVKELEKNHGTGSVMLMGKGLDNSNLAVVPSGCLSLDIALGVGGYPRGRIIEIYGNESSGKTT
LALHSLAEVQKLNGIVAFVDAEHALDVEYARKLGVDVDKLIVSQPDYGEQALEIVDSLVRSNIVDLIVVDSVAALVPKAE
IEGAMGDSHMGLQARLMSQALRKLAGSINKSKSIVIFINQVRMKIGVVYGNPETTTGGIALKFYATIRVEVRKGNPIREG
KDQIGNETTLKVVKNKVAPPFKQANVDMIFGRGIPKENDIFNIAVEEELIQRKGAWFSFINENGEEISLGQGKTNSVSYL
MENPDILDYLEYTIRKKHNLIIPDYLIEKFESNSSKGKKVKSEELQEN
>Mature_367_residues
AKNDSKDANKEELLEKLVKELEKNHGTGSVMLMGKGLDNSNLAVVPSGCLSLDIALGVGGYPRGRIIEIYGNESSGKTTL
ALHSLAEVQKLNGIVAFVDAEHALDVEYARKLGVDVDKLIVSQPDYGEQALEIVDSLVRSNIVDLIVVDSVAALVPKAEI
EGAMGDSHMGLQARLMSQALRKLAGSINKSKSIVIFINQVRMKIGVVYGNPETTTGGIALKFYATIRVEVRKGNPIREGK
DQIGNETTLKVVKNKVAPPFKQANVDMIFGRGIPKENDIFNIAVEEELIQRKGAWFSFINENGEEISLGQGKTNSVSYLM
ENPDILDYLEYTIRKKHNLIIPDYLIEKFESNSSKGKKVKSEELQEN

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=330, Percent_Identity=55.4545454545455, Blast_Score=374, Evalue=1e-105,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_PETMO (A9BEV2)

Other databases:

- EMBL:   CP000879
- RefSeq:   YP_001567153.1
- ProteinModelPortal:   A9BEV2
- SMR:   A9BEV2
- GeneID:   5756859
- GenomeReviews:   CP000879_GR
- KEGG:   pmo:Pmob_0081
- HOGENOM:   HBG339889
- OMA:   YGEGINT
- ProtClustDB:   PRK09354
- BioCyc:   PMOB403833:PMOB_0081-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 40387; Mature: 40256

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNDSKDANKEELLEKLVKELEKNHGTGSVMLMGKGLDNSNLAVVPSGCLSLDIALGVG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEEEEEECCC
GYPRGRIIEIYGNESSGKTTLALHSLAEVQKLNGIVAFVDAEHALDVEYARKLGVDVDKL
CCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHCCEEEEEECCHHCCHHHHHHHCCCHHHH
IVSQPDYGEQALEIVDSLVRSNIVDLIVVDSVAALVPKAEIEGAMGDSHMGLQARLMSQA
HCCCCCCCHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHH
LRKLAGSINKSKSIVIFINQVRMKIGVVYGNPETTTGGIALKFYATIRVEVRKGNPIREG
HHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCC
KDQIGNETTLKVVKNKVAPPFKQANVDMIFGRGIPKENDIFNIAVEEELIQRKGAWFSFI
HHHHCCHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCEEEEEEHHHHHHHCCCEEEEE
NENGEEISLGQGKTNSVSYLMENPDILDYLEYTIRKKHNLIIPDYLIEKFESNSSKGKKV
CCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCCCCC
KSEELQEN
CHHHHCCC
>Mature Secondary Structure 
AKNDSKDANKEELLEKLVKELEKNHGTGSVMLMGKGLDNSNLAVVPSGCLSLDIALGVG
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEEEEEECCC
GYPRGRIIEIYGNESSGKTTLALHSLAEVQKLNGIVAFVDAEHALDVEYARKLGVDVDKL
CCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHCCEEEEEECCHHCCHHHHHHHCCCHHHH
IVSQPDYGEQALEIVDSLVRSNIVDLIVVDSVAALVPKAEIEGAMGDSHMGLQARLMSQA
HCCCCCCCHHHHHHHHHHHHCCHHEEEHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHH
LRKLAGSINKSKSIVIFINQVRMKIGVVYGNPETTTGGIALKFYATIRVEVRKGNPIREG
HHHHHCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCC
KDQIGNETTLKVVKNKVAPPFKQANVDMIFGRGIPKENDIFNIAVEEELIQRKGAWFSFI
HHHHCCHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCEEEEEEHHHHHHHCCCEEEEE
NENGEEISLGQGKTNSVSYLMENPDILDYLEYTIRKKHNLIIPDYLIEKFESNSSKGKKV
CCCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCCCCC
KSEELQEN
CHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA