Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877514
Identifier: 160877514
GI number: 160877514
Start: 5213632
End: 5214762
Strand: Reverse
Name: 160877514
Synonym: Sbal195_4413
Alternate gene names: NA
Gene position: 5214762-5213632 (Counterclockwise)
Preceding gene: 160877515
Following gene: 160877511
Centisome position: 97.52
GC content: 39.43
Gene sequence:
>1131_bases TTGACCACTACAAATGCATTAACTGTTGGTGCATACACACAGAAAACTCATATCACTGAAGAAGATACTCAAGCATATTC ATCACTAGCTCCGCATGGTGGATTAAGTCCTTATAGTACAACATCAGTATTATGGAACAGAAATACACCAATTAAACCCG AGGTTGTCTTTGAAGGTGGTAATGTTGGTTATGACCAATTGAGCTGCTCTGGCTTTGCAAGTCTGAAATTATTAACTACA CATAATAAGATAACAGAAAGGCATTTTTCTACATTTGAAGCAACAAGTGCAGCAACCGCACTTTCGGGTAAATTTGCAGC TGAAATTTATGCGATTTATCCCTCAATATGGCCTGAAACGGTAAGAGCGCTCATCGTCCATTCAGCTGAATGGACTGATG CAATGAAAAAACAATTCGTGCACGGCACAACGCCCCGCCAACAAGCAACACATTTAGTCCGTTGTGTTGGTTTTGGAGTT CCAAATTTAGATAAAGCTATAAAAAGTATGAATAATTCTCTGGCTTTAATAGTGGAAGATGAATTACAACCATATGAAAA AAAGCAGGGTAAGCAACCAAGCACACGTGATATGCATATACACGATATCCCATGGCCTAAGGATAGCTTATTAAAACTAG GGGAGGTGGATGTCGAAATGACGGTTACGCTCTCTTATTTTATAGAACCAAATCCTTCAAGCAGAAATGTTTCCGGTAAA TATAGTTACCCTAGTCATCAACTTAGATTTGATGTGAAGCGGTCAACTGAATCAATTAAAGAATTCCACGCTAGATTAAG TCGTAACGCCCAAGATACAGAAGAAGGTACTGCTATTGCTCCTAGTGATCCGAACTGGTTGCTGGGTGATTTTAGGCATA AAGGTTCCATTCATAAAGATGTCTGGAAAGGAACTGCGGCTGATTTGGCTGCAAGAGGACAAATTGCGATTTACCCTGCT ATGGGGTGGTGGCGCACTCGAACAAAATTGCAAAAATGGGATAAAAAAGCTCGCTATTCCATGATTATTTCCATAGCGGT ACCAGAAGTCGATATTGATGTAGATCTTTATACTGACATTATGAATCAAATTGATACACCGGTTCAAATAACATCCGAAG TATTTGTGTGA
Upstream 100 bases:
>100_bases ATTACAGTGAGACCAGACCCCATCAATATAATGGTGGGTTAACGCCAAATGAGTCAGAACGTTTATATTGGAATGACTCT AAAACCGTGGCCAATTTTAC
Downstream 100 bases:
>100_bases TACTTAATAGTATAAACTTGTGGCATCTTCAAGTTTGATTGTTTTCAGTCTCACTTTTGTACACAAAGATCTGTAAAATG GTAAAAATTTGTTGGTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MTTTNALTVGAYTQKTHITEEDTQAYSSLAPHGGLSPYSTTSVLWNRNTPIKPEVVFEGGNVGYDQLSCSGFASLKLLTT HNKITERHFSTFEATSAATALSGKFAAEIYAIYPSIWPETVRALIVHSAEWTDAMKKQFVHGTTPRQQATHLVRCVGFGV PNLDKAIKSMNNSLALIVEDELQPYEKKQGKQPSTRDMHIHDIPWPKDSLLKLGEVDVEMTVTLSYFIEPNPSSRNVSGK YSYPSHQLRFDVKRSTESIKEFHARLSRNAQDTEEGTAIAPSDPNWLLGDFRHKGSIHKDVWKGTAADLAARGQIAIYPA MGWWRTRTKLQKWDKKARYSMIISIAVPEVDIDVDLYTDIMNQIDTPVQITSEVFV
Sequences:
>Translated_376_residues MTTTNALTVGAYTQKTHITEEDTQAYSSLAPHGGLSPYSTTSVLWNRNTPIKPEVVFEGGNVGYDQLSCSGFASLKLLTT HNKITERHFSTFEATSAATALSGKFAAEIYAIYPSIWPETVRALIVHSAEWTDAMKKQFVHGTTPRQQATHLVRCVGFGV PNLDKAIKSMNNSLALIVEDELQPYEKKQGKQPSTRDMHIHDIPWPKDSLLKLGEVDVEMTVTLSYFIEPNPSSRNVSGK YSYPSHQLRFDVKRSTESIKEFHARLSRNAQDTEEGTAIAPSDPNWLLGDFRHKGSIHKDVWKGTAADLAARGQIAIYPA MGWWRTRTKLQKWDKKARYSMIISIAVPEVDIDVDLYTDIMNQIDTPVQITSEVFV >Mature_375_residues TTTNALTVGAYTQKTHITEEDTQAYSSLAPHGGLSPYSTTSVLWNRNTPIKPEVVFEGGNVGYDQLSCSGFASLKLLTTH NKITERHFSTFEATSAATALSGKFAAEIYAIYPSIWPETVRALIVHSAEWTDAMKKQFVHGTTPRQQATHLVRCVGFGVP NLDKAIKSMNNSLALIVEDELQPYEKKQGKQPSTRDMHIHDIPWPKDSLLKLGEVDVEMTVTLSYFIEPNPSSRNVSGKY SYPSHQLRFDVKRSTESIKEFHARLSRNAQDTEEGTAIAPSDPNWLLGDFRHKGSIHKDVWKGTAADLAARGQIAIYPAM GWWRTRTKLQKWDKKARYSMIISIAVPEVDIDVDLYTDIMNQIDTPVQITSEVFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42119; Mature: 41988
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTNALTVGAYTQKTHITEEDTQAYSSLAPHGGLSPYSTTSVLWNRNTPIKPEVVFEGG CCCCCEEEECCEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECC NVGYDQLSCSGFASLKLLTTHNKITERHFSTFEATSAATALSGKFAAEIYAIYPSIWPET CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHH VRALIVHSAEWTDAMKKQFVHGTTPRQQATHLVRCVGFGVPNLDKAIKSMNNSLALIVED HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECC ELQPYEKKQGKQPSTRDMHIHDIPWPKDSLLKLGEVDVEMTVTLSYFIEPNPSSRNVSGK CCCCHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCC YSYPSHQLRFDVKRSTESIKEFHARLSRNAQDTEEGTAIAPSDPNWLLGDFRHKGSIHKD CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEECCHHCCCCCHHH VWKGTAADLAARGQIAIYPAMGWWRTRTKLQKWDKKARYSMIISIAVPEVDIDVDLYTDI HHCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCEEEEEEEEECCCEECCHHHHHHH MNQIDTPVQITSEVFV HHHCCCCEEECCCCCC >Mature Secondary Structure TTTNALTVGAYTQKTHITEEDTQAYSSLAPHGGLSPYSTTSVLWNRNTPIKPEVVFEGG CCCCEEEECCEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECC NVGYDQLSCSGFASLKLLTTHNKITERHFSTFEATSAATALSGKFAAEIYAIYPSIWPET CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCHHH VRALIVHSAEWTDAMKKQFVHGTTPRQQATHLVRCVGFGVPNLDKAIKSMNNSLALIVED HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECC ELQPYEKKQGKQPSTRDMHIHDIPWPKDSLLKLGEVDVEMTVTLSYFIEPNPSSRNVSGK CCCCHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCC YSYPSHQLRFDVKRSTESIKEFHARLSRNAQDTEEGTAIAPSDPNWLLGDFRHKGSIHKD CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEECCHHCCCCCHHH VWKGTAADLAARGQIAIYPAMGWWRTRTKLQKWDKKARYSMIISIAVPEVDIDVDLYTDI HHCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCEEEEEEEEECCCEECCHHHHHHH MNQIDTPVQITSEVFV HHHCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA