| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yacH [H]
Identifier: 160877448
GI number: 160877448
Start: 5136287
End: 5137789
Strand: Direct
Name: yacH [H]
Synonym: Sbal195_4346
Alternate gene names: 160877448
Gene position: 5136287-5137789 (Clockwise)
Preceding gene: 160877447
Following gene: 160877451
Centisome position: 96.05
GC content: 50.43
Gene sequence:
>1503_bases ATGAACAGACTACATCGATGGAATTGGCTAGTGTTAACGGCGGCATTAGTGGCCTTGCCTTTCACTACCACAGCCCAAGC TGCGGGCGTATCTGTGAGCCAAGGCTCGAGCGCTGCGGCAAGCCAAGCCGAACTCGAACAAATGCTGGCGCCTATTGCCC TGTATCCCGATAGCTTATTGACCCACATACTTATCGCCTCAACTTATCCACTCGAAATCGTGCAGGCACAACGTTGGTTA ACCCAGCGCCCCAAATCATCGGTCGATCAACTGATGTCGCAGGCCGAAGATCAAGATTGGGACCCGAGCGTCAAAGCCTT GCTGGCCTTCCCGACGCTGCTGCAAAAAATGAGTGAAGATCTCGACTGGACTCAAAGACTCGGTGAAGCCTTCTTAGAAG ATGAAGGCCAAGTGATGAACAGCATCCAATCCCTAAGGCAACAGGCTGATAAAGCGAATAGCTTAGCGGACATGGACAAC ATGGCGATCACCCGCGCCAACAATCAGATCATCATAGAACCCGCTAAGCGAGAAATTGTGTACGTGCCCTATTACGATCC GCGTGTGGTTTATGGCACATGGCGCTGGGGTGTGGCTTATCCACCCGTGTATTGGGAATTTGGCGGCTATGCTGGCTATC CCTATCGTCCGAGTCATAACCATTTCTACTGGTCACCTGGCATCCATATTTCCTTTAACTACTTCTTCAGTTCATTCCAC TGGCACAACCATAAAGTGGTCGTGATCGACTATCGCCATTCACATCGTTATCGCCCACGTGAAAGATACACGGTCAGCTA TGGTGCCCAGCCTTGGAAACATAAACCCGAACATAGACGTGGCGTGAGTTACCACAACCCCGTCGTGAAGCAACGCTATT ACAACGAAGACAAGTATCGCGGTAGAGATTCACACTCTAGCGGCAGTAAGCAGCACTTAAATAGTCAATATTCGAAGTCA AAAGAACGCCAAGATACCCATAGCAATCAAAGTAATATGAGTAATCAGGGTCATAAGAGTCGTGACAATAAGGACTATCA CAACGCCAGTCGTGAACGTGATAACCGCGCACCGAGTTATCAAAAAACGCAGGCCGAGTTAAAGGAACGTCGATCCGCGA CTATGGTACAAACGCCGACTCACAAGGATCGTAATGACGCGCAATCGAGACCCGTGCAGTCAAAGCCAATGCCATCGAAA GAGCCTCAGCAAAGGCAATATCAAACTCGGGAGTCACAGCCGCGTAATGTCGATCAACAAAGGACGCCGCCACAAAGGCA AGAAAATCCAAGGACTGCGACCCCAAGAGTTGAAACGCCACGACCCGAGATAAGACGCGCAGAACCGCAACGTGTTGAAC AACCAAGACAAGCAGCGCCAAGACAACGCGAAGAAGTGAGAGTGAGACAAAGTGAGCCCCGCCAAAATGCGCAAACCGCT CGCTCGGTAGAACATAACCAAGGCCGCTCAACTCAAAGCCAAGAACGTCGTCATAGGGAATAA
Upstream 100 bases:
>100_bases TAAAAATAACTTTTTAACCGCAAAATGCTTTCAGCTTATGTTCATATTCAAACGCCTATGATGCCCATAACATCCTCGAA CAGGATTATTGGAGCAAACC
Downstream 100 bases:
>100_bases TTTCGCTATAGCCGCAGTAACACAAAGAGCGCAGTTAACTGCGCTCTTTGTGTTTTAATTAGTTGTTAAATGGCTTATTT TTAAACCGCTTAAAACTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MNRLHRWNWLVLTAALVALPFTTTAQAAGVSVSQGSSAAASQAELEQMLAPIALYPDSLLTHILIASTYPLEIVQAQRWL TQRPKSSVDQLMSQAEDQDWDPSVKALLAFPTLLQKMSEDLDWTQRLGEAFLEDEGQVMNSIQSLRQQADKANSLADMDN MAITRANNQIIIEPAKREIVYVPYYDPRVVYGTWRWGVAYPPVYWEFGGYAGYPYRPSHNHFYWSPGIHISFNYFFSSFH WHNHKVVVIDYRHSHRYRPRERYTVSYGAQPWKHKPEHRRGVSYHNPVVKQRYYNEDKYRGRDSHSSGSKQHLNSQYSKS KERQDTHSNQSNMSNQGHKSRDNKDYHNASRERDNRAPSYQKTQAELKERRSATMVQTPTHKDRNDAQSRPVQSKPMPSK EPQQRQYQTRESQPRNVDQQRTPPQRQENPRTATPRVETPRPEIRRAEPQRVEQPRQAAPRQREEVRVRQSEPRQNAQTA RSVEHNQGRSTQSQERRHRE
Sequences:
>Translated_500_residues MNRLHRWNWLVLTAALVALPFTTTAQAAGVSVSQGSSAAASQAELEQMLAPIALYPDSLLTHILIASTYPLEIVQAQRWL TQRPKSSVDQLMSQAEDQDWDPSVKALLAFPTLLQKMSEDLDWTQRLGEAFLEDEGQVMNSIQSLRQQADKANSLADMDN MAITRANNQIIIEPAKREIVYVPYYDPRVVYGTWRWGVAYPPVYWEFGGYAGYPYRPSHNHFYWSPGIHISFNYFFSSFH WHNHKVVVIDYRHSHRYRPRERYTVSYGAQPWKHKPEHRRGVSYHNPVVKQRYYNEDKYRGRDSHSSGSKQHLNSQYSKS KERQDTHSNQSNMSNQGHKSRDNKDYHNASRERDNRAPSYQKTQAELKERRSATMVQTPTHKDRNDAQSRPVQSKPMPSK EPQQRQYQTRESQPRNVDQQRTPPQRQENPRTATPRVETPRPEIRRAEPQRVEQPRQAAPRQREEVRVRQSEPRQNAQTA RSVEHNQGRSTQSQERRHRE >Mature_500_residues MNRLHRWNWLVLTAALVALPFTTTAQAAGVSVSQGSSAAASQAELEQMLAPIALYPDSLLTHILIASTYPLEIVQAQRWL TQRPKSSVDQLMSQAEDQDWDPSVKALLAFPTLLQKMSEDLDWTQRLGEAFLEDEGQVMNSIQSLRQQADKANSLADMDN MAITRANNQIIIEPAKREIVYVPYYDPRVVYGTWRWGVAYPPVYWEFGGYAGYPYRPSHNHFYWSPGIHISFNYFFSSFH WHNHKVVVIDYRHSHRYRPRERYTVSYGAQPWKHKPEHRRGVSYHNPVVKQRYYNEDKYRGRDSHSSGSKQHLNSQYSKS KERQDTHSNQSNMSNQGHKSRDNKDYHNASRERDNRAPSYQKTQAELKERRSATMVQTPTHKDRNDAQSRPVQSKPMPSK EPQQRQYQTRESQPRNVDQQRTPPQRQENPRTATPRVETPRPEIRRAEPQRVEQPRQAAPRQREEVRVRQSEPRQNAQTA RSVEHNQGRSTQSQERRHRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786308, Length=550, Percent_Identity=29.2727272727273, Blast_Score=169, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021728 [H]
Pfam domain/function: PF11737 DUF3300 [H]
EC number: NA
Molecular weight: Translated: 58515; Mature: 58515
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLHRWNWLVLTAALVALPFTTTAQAAGVSVSQGSSAAASQAELEQMLAPIALYPDSLL CCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHH THILIASTYPLEIVQAQRWLTQRPKSSVDQLMSQAEDQDWDPSVKALLAFPTLLQKMSED HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC LDWTQRLGEAFLEDEGQVMNSIQSLRQQADKANSLADMDNMAITRANNQIIIEPAKREIV CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEE YVPYYDPRVVYGTWRWGVAYPPVYWEFGGYAGYPYRPSHNHFYWSPGIHISFNYFFSSFH EEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEHHEE WHNHKVVVIDYRHSHRYRPRERYTVSYGAQPWKHKPEHRRGVSYHNPVVKQRYYNEDKYR ECCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHCCCHHCC GRDSHSSGSKQHLNSQYSKSKERQDTHSNQSNMSNQGHKSRDNKDYHNASRERDNRAPSY CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCH QKTQAELKERRSATMVQTPTHKDRNDAQSRPVQSKPMPSKEPQQRQYQTRESQPRNVDQQ HHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH RTPPQRQENPRTATPRVETPRPEIRRAEPQRVEQPRQAAPRQREEVRVRQSEPRQNAQTA CCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCHHHHCCCHHHHHHHHHCCCHHHHHHH RSVEHNQGRSTQSQERRHRE HHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure MNRLHRWNWLVLTAALVALPFTTTAQAAGVSVSQGSSAAASQAELEQMLAPIALYPDSLL CCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHH THILIASTYPLEIVQAQRWLTQRPKSSVDQLMSQAEDQDWDPSVKALLAFPTLLQKMSED HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC LDWTQRLGEAFLEDEGQVMNSIQSLRQQADKANSLADMDNMAITRANNQIIIEPAKREIV CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEE YVPYYDPRVVYGTWRWGVAYPPVYWEFGGYAGYPYRPSHNHFYWSPGIHISFNYFFSSFH EEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEHHEE WHNHKVVVIDYRHSHRYRPRERYTVSYGAQPWKHKPEHRRGVSYHNPVVKQRYYNEDKYR ECCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCHHHHHHCCCHHCC GRDSHSSGSKQHLNSQYSKSKERQDTHSNQSNMSNQGHKSRDNKDYHNASRERDNRAPSY CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCH QKTQAELKERRSATMVQTPTHKDRNDAQSRPVQSKPMPSKEPQQRQYQTRESQPRNVDQQ HHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH RTPPQRQENPRTATPRVETPRPEIRRAEPQRVEQPRQAAPRQREEVRVRQSEPRQNAQTA CCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCHHHHCCCHHHHHHHHHCCCHHHHHHH RSVEHNQGRSTQSQERRHRE HHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]