| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yuxL [H]
Identifier: 160877425
GI number: 160877425
Start: 5105352
End: 5107289
Strand: Direct
Name: yuxL [H]
Synonym: Sbal195_4323
Alternate gene names: 160877425
Gene position: 5105352-5107289 (Clockwise)
Preceding gene: 160877424
Following gene: 160877433
Centisome position: 95.48
GC content: 44.84
Gene sequence:
>1938_bases ATGAAATGGATTTTACCGCTGCTTTTTCTGTGGCTATGCAACCATGCCGTTGCCGACACCGCCCCACAATTACCCGTTGA AGCCTTTGCCAGCATCCCAGATGTGAGCTCTGTACAGCTCTCGCCTAACGGCAAAAAACTCGCATCGGTTGTACGCGTCG ACCAAGCCAAACTCAAAGGTACTGTCGTTAGTATCCAAGATATAGAAACAGGCGAAAAAAGCATTCCGCTACACACGGAT AATCAAAAATTTGTCATCCTGTCTCTGCAGTGGGCAAACGATAATATCTTACTGATCAGTGCTAAGTTTCCGGCTAACCG TTACGGTACACCGACAACCGAAACCCGCCTTGTTAAGTATGATTTGACCACTAAAAAAACCTCGAGTGTTCTTCCGCGAA GTGTCTTAGATCGTCTCAATTGGATCCCGCAACATCAGGGGCAAATTATCGATCTGATGGCAGATGATCCCGACAATATT TTACTGTCATTAGACGGAATGGGCGAAAACGTAGGCGAAGATAGTGTACTGAAAGTCAATTTAGCGCAGGGTAAATCCAG TTACACCCAAAATGCTAAAAAGAAGATCATCAGTTGGATTACTGACAGGCAACACAAGGTCCGTATTTCTATCTATAACG ATGATACTGAGTACCGCATTTATGAACAGGCCGAGCAAAAGAGAGATTCACGTTTACTTTGGACCTTTAAAGCCTTTTCA GAAGACAGTGTTTGGCCATTAGGTTTTGATGCTGACCCCAATATTCTTTACGTTCGCGCCTATCACCAAGGTTTCGAAGC CATATTTAAAGTCAATCTGACCGATCCTAAGCTCACAAAAGAATTGGTCTACGCCAATGAAGATACTGACGTTGAAGGTA ATTTACTCTATTCGAAACTGAAGAAAAAAGTGATTGGTATCAGTGAAGGTGACGGCGAAGAATACACCTTTTGGGAAAAA GAATATGTGGGCCTACAAAATGGTTTAAAAGCCGTGTTACCCAATGCACATAACTATATTACTCAGTTCAGTACCGATGA ACGCCGCTACATAGTGTATTCCACTAGCTCGACCGAGCCCGGCACTTACTATTTTGGCGATAGGGACGAAAAAACGCTTT ATCCAATCGCTAACCGATACGGCAGACTCAAGAGTGAACTCCTCGCCGATACTCAATATTTAACTTATGAGGCAAGGGAT AAGCTCAAAATCGATGCTTACCTAACGGTGCCAAAAGGGCTTGAAGCCAAGCAACTGCCGACGATTATTTTCCCCCATGG CGGCCCCATCAGTTACGACAGCAACGACTTCGACTACTGGGCACAGTTCTTCGCTAATCGTGGTTATGCGGTATTTCGGA TGAACTTCAGGGGCTCGGCAGGTTACGGCTATGAGTTTATGAAAGCTGGTCTAAAAAGCTGGGGACTCGAAATGCAAAAC GACGTCGAAGACGGGACTCGCTACCTAATAGATCAAGGGATTAGCGATCCTAAACGTATTTGTATTGTCGGGGCTAGCTA TGGTGGTTACGCGGCCTTAATGGGTGCAGCCATGACTCCCGATCTCTACCGCTGCGCCGTGAGTGTAGCGGGTGTCACCG ATGTGGCCTATCTAGTGAAATCGAGCCGAAGATTTACTAACTATAAAGTGGTTAAAGAGCAAATAGGGGATGACTTTGAT GCGCTCTATGACCGCTCGCCGATCAGTAAAGCCGATAAAATTAACATCCCAGTATTGCTGCTACATGGCGATAAGGACAG AGTGGTGAAGGTTCAACATAGCCGAGAAATGTATGACGAACTCAAATCACTGAAAAAACCAGTGGAGTATATTGAGCTGG AGAATGGCGATCATTACTTGAGCAATAACGACAACAGACTCGCGACATTTAAAGCCTTAGATAAGTTCTTAGCTAATAAC CTCAACCCTAAGTTATAA
Upstream 100 bases:
>100_bases AAGACTTTTTGAATAAATAAATCTGTAAAGACAGTAGTTTACAAATATCAAAATCACTATGATGTTGATTTTACAATTGT AACAAAGATGTGATTCTATA
Downstream 100 bases:
>100_bases CTGAACAGCAGCACTTTAAGCGAATGCCCAATATAAAAAACGCGACTCAGAGGTCGCGTTTTTTATTCAGCTCAACAAAC AAGATTAAGCGTAAGAATGT
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 645; Mature: 645
Protein sequence:
>645_residues MKWILPLLFLWLCNHAVADTAPQLPVEAFASIPDVSSVQLSPNGKKLASVVRVDQAKLKGTVVSIQDIETGEKSIPLHTD NQKFVILSLQWANDNILLISAKFPANRYGTPTTETRLVKYDLTTKKTSSVLPRSVLDRLNWIPQHQGQIIDLMADDPDNI LLSLDGMGENVGEDSVLKVNLAQGKSSYTQNAKKKIISWITDRQHKVRISIYNDDTEYRIYEQAEQKRDSRLLWTFKAFS EDSVWPLGFDADPNILYVRAYHQGFEAIFKVNLTDPKLTKELVYANEDTDVEGNLLYSKLKKKVIGISEGDGEEYTFWEK EYVGLQNGLKAVLPNAHNYITQFSTDERRYIVYSTSSTEPGTYYFGDRDEKTLYPIANRYGRLKSELLADTQYLTYEARD KLKIDAYLTVPKGLEAKQLPTIIFPHGGPISYDSNDFDYWAQFFANRGYAVFRMNFRGSAGYGYEFMKAGLKSWGLEMQN DVEDGTRYLIDQGISDPKRICIVGASYGGYAALMGAAMTPDLYRCAVSVAGVTDVAYLVKSSRRFTNYKVVKEQIGDDFD ALYDRSPISKADKINIPVLLLHGDKDRVVKVQHSREMYDELKSLKKPVEYIELENGDHYLSNNDNRLATFKALDKFLANN LNPKL
Sequences:
>Translated_645_residues MKWILPLLFLWLCNHAVADTAPQLPVEAFASIPDVSSVQLSPNGKKLASVVRVDQAKLKGTVVSIQDIETGEKSIPLHTD NQKFVILSLQWANDNILLISAKFPANRYGTPTTETRLVKYDLTTKKTSSVLPRSVLDRLNWIPQHQGQIIDLMADDPDNI LLSLDGMGENVGEDSVLKVNLAQGKSSYTQNAKKKIISWITDRQHKVRISIYNDDTEYRIYEQAEQKRDSRLLWTFKAFS EDSVWPLGFDADPNILYVRAYHQGFEAIFKVNLTDPKLTKELVYANEDTDVEGNLLYSKLKKKVIGISEGDGEEYTFWEK EYVGLQNGLKAVLPNAHNYITQFSTDERRYIVYSTSSTEPGTYYFGDRDEKTLYPIANRYGRLKSELLADTQYLTYEARD KLKIDAYLTVPKGLEAKQLPTIIFPHGGPISYDSNDFDYWAQFFANRGYAVFRMNFRGSAGYGYEFMKAGLKSWGLEMQN DVEDGTRYLIDQGISDPKRICIVGASYGGYAALMGAAMTPDLYRCAVSVAGVTDVAYLVKSSRRFTNYKVVKEQIGDDFD ALYDRSPISKADKINIPVLLLHGDKDRVVKVQHSREMYDELKSLKKPVEYIELENGDHYLSNNDNRLATFKALDKFLANN LNPKL >Mature_645_residues MKWILPLLFLWLCNHAVADTAPQLPVEAFASIPDVSSVQLSPNGKKLASVVRVDQAKLKGTVVSIQDIETGEKSIPLHTD NQKFVILSLQWANDNILLISAKFPANRYGTPTTETRLVKYDLTTKKTSSVLPRSVLDRLNWIPQHQGQIIDLMADDPDNI LLSLDGMGENVGEDSVLKVNLAQGKSSYTQNAKKKIISWITDRQHKVRISIYNDDTEYRIYEQAEQKRDSRLLWTFKAFS EDSVWPLGFDADPNILYVRAYHQGFEAIFKVNLTDPKLTKELVYANEDTDVEGNLLYSKLKKKVIGISEGDGEEYTFWEK EYVGLQNGLKAVLPNAHNYITQFSTDERRYIVYSTSSTEPGTYYFGDRDEKTLYPIANRYGRLKSELLADTQYLTYEARD KLKIDAYLTVPKGLEAKQLPTIIFPHGGPISYDSNDFDYWAQFFANRGYAVFRMNFRGSAGYGYEFMKAGLKSWGLEMQN DVEDGTRYLIDQGISDPKRICIVGASYGGYAALMGAAMTPDLYRCAVSVAGVTDVAYLVKSSRRFTNYKVVKEQIGDDFD ALYDRSPISKADKINIPVLLLHGDKDRVVKVQHSREMYDELKSLKKPVEYIELENGDHYLSNNDNRLATFKALDKFLANN LNPKL
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=251, Percent_Identity=25.4980079681275, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI41349456, Length=253, Percent_Identity=28.8537549407115, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI16933540, Length=225, Percent_Identity=26.2222222222222, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI194394146, Length=282, Percent_Identity=25.886524822695, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25144537, Length=427, Percent_Identity=26.2295081967213, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI25144540, Length=427, Percent_Identity=26.2295081967213, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI25144543, Length=319, Percent_Identity=26.9592476489028, Blast_Score=126, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17552908, Length=267, Percent_Identity=31.0861423220974, Blast_Score=125, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17508019, Length=216, Percent_Identity=32.4074074074074, Blast_Score=83, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17508017, Length=216, Percent_Identity=32.4074074074074, Blast_Score=83, Evalue=6e-16, Organism=Caenorhabditis elegans, GI25149159, Length=242, Percent_Identity=26.0330578512397, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24582257, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 73205; Mature: 73205
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWILPLLFLWLCNHAVADTAPQLPVEAFASIPDVSSVQLSPNGKKLASVVRVDQAKLKG CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCE TVVSIQDIETGEKSIPLHTDNQKFVILSLQWANDNILLISAKFPANRYGTPTTETRLVKY EEEEEEECCCCCCCCCEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEE DLTTKKTSSVLPRSVLDRLNWIPQHQGQIIDLMADDPDNILLSLDGMGENVGEDSVLKVN ECCCCHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEE LAQGKSSYTQNAKKKIISWITDRQHKVRISIYNDDTEYRIYEQAEQKRDSRLLWTFKAFS ECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHHCCCCEEEEEEEECC EDSVWPLGFDADPNILYVRAYHQGFEAIFKVNLTDPKLTKELVYANEDTDVEGNLLYSKL CCCCCEECCCCCCCEEEEEEHHCCCEEEEEEECCCCHHHHHHEECCCCCCCCCHHHHHHH KKKVIGISEGDGEEYTFWEKEYVGLQNGLKAVLPNAHNYITQFSTDERRYIVYSTSSTEP HHHHCCCCCCCCCCEEEEHHHHHCHHCCHHHHCCCCHHHHEECCCCCCEEEEEECCCCCC GTYYFGDRDEKTLYPIANRYGRLKSELLADTQYLTYEARDKLKIDAYLTVPKGLEAKQLP CEEEECCCCCCEECHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCCHHCCC TIIFPHGGPISYDSNDFDYWAQFFANRGYAVFRMNFRGSAGYGYEFMKAGLKSWGLEMQN EEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCC DVEDGTRYLIDQGISDPKRICIVGASYGGYAALMGAAMTPDLYRCAVSVAGVTDVAYLVK CHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH SSRRFTNYKVVKEQIGDDFDALYDRSPISKADKINIPVLLLHGDKDRVVKVQHSREMYDE HCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHH LKSLKKPVEYIELENGDHYLSNNDNRLATFKALDKFLANNLNPKL HHHHHCCCEEEEECCCCEEECCCCCEEHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKWILPLLFLWLCNHAVADTAPQLPVEAFASIPDVSSVQLSPNGKKLASVVRVDQAKLKG CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCE TVVSIQDIETGEKSIPLHTDNQKFVILSLQWANDNILLISAKFPANRYGTPTTETRLVKY EEEEEEECCCCCCCCCEECCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEE DLTTKKTSSVLPRSVLDRLNWIPQHQGQIIDLMADDPDNILLSLDGMGENVGEDSVLKVN ECCCCHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEE LAQGKSSYTQNAKKKIISWITDRQHKVRISIYNDDTEYRIYEQAEQKRDSRLLWTFKAFS ECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHHCCCCEEEEEEEECC EDSVWPLGFDADPNILYVRAYHQGFEAIFKVNLTDPKLTKELVYANEDTDVEGNLLYSKL CCCCCEECCCCCCCEEEEEEHHCCCEEEEEEECCCCHHHHHHEECCCCCCCCCHHHHHHH KKKVIGISEGDGEEYTFWEKEYVGLQNGLKAVLPNAHNYITQFSTDERRYIVYSTSSTEP HHHHCCCCCCCCCCEEEEHHHHHCHHCCHHHHCCCCHHHHEECCCCCCEEEEEECCCCCC GTYYFGDRDEKTLYPIANRYGRLKSELLADTQYLTYEARDKLKIDAYLTVPKGLEAKQLP CEEEECCCCCCEECHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCCHHCCC TIIFPHGGPISYDSNDFDYWAQFFANRGYAVFRMNFRGSAGYGYEFMKAGLKSWGLEMQN EEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCC DVEDGTRYLIDQGISDPKRICIVGASYGGYAALMGAAMTPDLYRCAVSVAGVTDVAYLVK CHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH SSRRFTNYKVVKEQIGDDFDALYDRSPISKADKINIPVLLLHGDKDRVVKVQHSREMYDE HCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHH LKSLKKPVEYIELENGDHYLSNNDNRLATFKALDKFLANNLNPKL HHHHHCCCEEEEECCCCEEECCCCCEEHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]