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The map label for this gene is 160877422

Identifier: 160877422

GI number: 160877422

Start: 5102202

End: 5102834

Strand: Direct

Name: 160877422

Synonym: Sbal195_4320

Alternate gene names: NA

Gene position: 5102202-5102834 (Clockwise)

Preceding gene: 160877421

Following gene: 160877424

Centisome position: 95.42

GC content: 47.24

Gene sequence:

>633_bases
ATGCAGAAAAGAATTTTAGTCATCGCCATATTATTGATCGGCCTTGGCGGTCTATTTGCGGTGAAATTTAATCCCCCGAA
ACCTATCGAGCTAGAGAGTGGTTTTTTGTTTCCGCAGGCCTATGAATTAGCGCCCTTTGAATTGGTTGATCAACATCAGC
AGGCTTTTACCAACGCCAGTTTGCAGGGGAAATGGAGCTTATTCTTTATCGGTTTTACCTTTTGCCCCGACGTTTGTCCT
ACGACCTTAAATAAACTCGCGGCGGCTTATCCCGATCTAAACAAAATTGCGCCATTGCAGGTGGTGTTTTTATCCGTCGA
CCCCAAACGGGACACACCGGATAAACTCCTGACCTATGTTAATTTTTTCAATCCAGAATTTAAAGCGGTCACGGGCGAGC
AGACACAAATCTTCCCGCTCACCCGCAGCTTAGGACTGACCTATGCCATGGTCGGTGAAGGGGAAAACTACCAAGTCGAC
CATAGTGCGGGTTATGTGTTGGTGTCGCCGCAGGGAACGCGAGTCGCAGTGTTTAAGCCTACGGCAGCGTTAGGCAAACC
GCCGCAGGTGTTAAATGATGAAATGATTAGCGATTTTAGAAAAATAGTGGCGCAATACAAACCTAGCCGTTGA

Upstream 100 bases:

>100_bases
ATTTGATGTTGTTATTCATGGCATTACTGCTCGACCACTATTTGTGGAACTAGTGTATGCAACTCGTTTGTCGCGCTAAC
CTGTCGTTATGGAGCCAATA

Downstream 100 bases:

>100_bases
TCACTCTTTGACCCAAGAGCCATCGTCCTTTGGCCTCACCCAAGGCTGAGAAAACCAATAGTAGCCATTGCGCGCCTTAC
TCGGCGCAGTGCAGTTGTAA

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MQKRILVIAILLIGLGGLFAVKFNPPKPIELESGFLFPQAYELAPFELVDQHQQAFTNASLQGKWSLFFIGFTFCPDVCP
TTLNKLAAAYPDLNKIAPLQVVFLSVDPKRDTPDKLLTYVNFFNPEFKAVTGEQTQIFPLTRSLGLTYAMVGEGENYQVD
HSAGYVLVSPQGTRVAVFKPTAALGKPPQVLNDEMISDFRKIVAQYKPSR

Sequences:

>Translated_210_residues
MQKRILVIAILLIGLGGLFAVKFNPPKPIELESGFLFPQAYELAPFELVDQHQQAFTNASLQGKWSLFFIGFTFCPDVCP
TTLNKLAAAYPDLNKIAPLQVVFLSVDPKRDTPDKLLTYVNFFNPEFKAVTGEQTQIFPLTRSLGLTYAMVGEGENYQVD
HSAGYVLVSPQGTRVAVFKPTAALGKPPQVLNDEMISDFRKIVAQYKPSR
>Mature_210_residues
MQKRILVIAILLIGLGGLFAVKFNPPKPIELESGFLFPQAYELAPFELVDQHQQAFTNASLQGKWSLFFIGFTFCPDVCP
TTLNKLAAAYPDLNKIAPLQVVFLSVDPKRDTPDKLLTYVNFFNPEFKAVTGEQTQIFPLTRSLGLTYAMVGEGENYQVD
HSAGYVLVSPQGTRVAVFKPTAALGKPPQVLNDEMISDFRKIVAQYKPSR

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=132, Percent_Identity=35.6060606060606, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI281182722, Length=132, Percent_Identity=35.6060606060606, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI281182716, Length=132, Percent_Identity=35.6060606060606, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI153791313, Length=132, Percent_Identity=35.6060606060606, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI4759068, Length=134, Percent_Identity=32.8358208955224, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17531419, Length=139, Percent_Identity=28.0575539568345, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6319498, Length=175, Percent_Identity=32, Blast_Score=97, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6319511, Length=172, Percent_Identity=30.8139534883721, Blast_Score=85, Evalue=9e-18,
Organism=Drosophila melanogaster, GI19920710, Length=164, Percent_Identity=31.0975609756098, Blast_Score=88, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 23330; Mature: 23330

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRILVIAILLIGLGGLFAVKFNPPKPIELESGFLFPQAYELAPFELVDQHQQAFTNAS
CCCHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC
LQGKWSLFFIGFTFCPDVCPTTLNKLAAAYPDLNKIAPLQVVFLSVDPKRDTPDKLLTYV
CCCCEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
NFFNPEFKAVTGEQTQIFPLTRSLGLTYAMVGEGENYQVDHSAGYVLVSPQGTRVAVFKP
HHCCCCEEEECCCCEEEEEEHHHCCCEEEEECCCCCEEEECCCCEEEECCCCCEEEEECC
TAALGKPPQVLNDEMISDFRKIVAQYKPSR
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKRILVIAILLIGLGGLFAVKFNPPKPIELESGFLFPQAYELAPFELVDQHQQAFTNAS
CCCHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC
LQGKWSLFFIGFTFCPDVCPTTLNKLAAAYPDLNKIAPLQVVFLSVDPKRDTPDKLLTYV
CCCCEEEEEEEEHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
NFFNPEFKAVTGEQTQIFPLTRSLGLTYAMVGEGENYQVDHSAGYVLVSPQGTRVAVFKP
HHCCCCEEEECCCCEEEEEEHHHCCCEEEEECCCCCEEEECCCCEEEECCCCCEEEEECC
TAALGKPPQVLNDEMISDFRKIVAQYKPSR
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]