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The map label for this gene is ybeF [C]

Identifier: 160877389

GI number: 160877389

Start: 5066616

End: 5067584

Strand: Direct

Name: ybeF [C]

Synonym: Sbal195_4287

Alternate gene names: 160877389

Gene position: 5066616-5067584 (Clockwise)

Preceding gene: 160877384

Following gene: 160877390

Centisome position: 94.75

GC content: 41.8

Gene sequence:

>969_bases
ATGCACATTAGTAACATGGATGGCCTGGATATTCTGAGTTTGAAAATACTCGTTTCATTATATGAGAACAAGTCTGCAAC
TTATGTCTCTAAGGCTCTTGATATTCCGGCTCCTAAAATAAGTCGTAGCCTTAAAAATCTACGGGAAATTTTTGGTGATG
AACTTTTCATTCGTCGTAAATACGGACTATTCCCCAATGAGTTTGCGACCCATTTATATCCAATCGCGAAAGAAGCCATT
GAATGTACTGATAAGTTTCATAAGGCCAGAGCCGCAAATGCTAACTTAGTGAAAACGCATATCGAGATTGCTGCTCCCGG
CTTGATTGCTTACGCTTTTCCTAAAGCCTTAATGCAGGCCATTAAAGATGAACAGAAGCTGATGCACATTAATATCACCC
CTTGGTCTATGCATACGACCCAAGACATTATTAACGGTGATACTACGCTGGGCATTTGCTGCAATAAAAGCACGGCTGAT
GTGGCCGCCTTTGGCGATAAACTCCTGACGACCACTCTGCAACGCATGGATAAGGTTTACCTTATTGCGAGCCGTAATCA
TCCAATTTTCAAACGGGAAATCACTTTAGAGACGATTGCAGAATATCCCTATGTGAATACCGACCTCGGTAATCCCAGTT
CTAAGCTCAGTCCTTACCAAGAGTTTTGTCTGAAGAGCAACATTAAACTCAATACTGAAATTACCATTACCAGTATTTCA
AGTTTGTTTGAATACCTAGGAGAGAGTCAGGCACTGTCGTTATTGCCCTATCGCGTGGTTTACGAGATGGTGAGTGATGT
AGCTGAGCTGCACACATGCCAACTGTCGCAACTCGAAGCCGAACGCTTATATGCTCATGCCGAAGCGCCAACCATTTTCT
TAGTGCAAAAAAATCAGCCAAGCAAAGTGAATGATGATTTAGTGTGGCTAAGTGGACAGATTAAAAAGATTGTTGACCAT
ATTATTTAG

Upstream 100 bases:

>100_bases
TATAGTTTTGAAGTTGAGATATGTTTCACATTAAATTTATTTAATGACGCCATAATTAATCGTTCTTTAAAGTATTTGCT
CGATAAAAGGGATATAAAAA

Downstream 100 bases:

>100_bases
CCCAAAGCAGCTTGCACAACCCATAGACTAGCCACTGCACAGAGGTGATAGGCATCCCTTGCCTTAGCTTAGGCTCCACC
TCAGCCCCCATACAAACCCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator-Like Protein; Transcriptional Regulator; Regulatory Protein LysR; Transcriptional Regulator LysR Family; Transcriptional Regulator LysR Family Protein; HTH-Type Transcriptional Regulator YidZ

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MHISNMDGLDILSLKILVSLYENKSATYVSKALDIPAPKISRSLKNLREIFGDELFIRRKYGLFPNEFATHLYPIAKEAI
ECTDKFHKARAANANLVKTHIEIAAPGLIAYAFPKALMQAIKDEQKLMHINITPWSMHTTQDIINGDTTLGICCNKSTAD
VAAFGDKLLTTTLQRMDKVYLIASRNHPIFKREITLETIAEYPYVNTDLGNPSSKLSPYQEFCLKSNIKLNTEITITSIS
SLFEYLGESQALSLLPYRVVYEMVSDVAELHTCQLSQLEAERLYAHAEAPTIFLVQKNQPSKVNDDLVWLSGQIKKIVDH
II

Sequences:

>Translated_322_residues
MHISNMDGLDILSLKILVSLYENKSATYVSKALDIPAPKISRSLKNLREIFGDELFIRRKYGLFPNEFATHLYPIAKEAI
ECTDKFHKARAANANLVKTHIEIAAPGLIAYAFPKALMQAIKDEQKLMHINITPWSMHTTQDIINGDTTLGICCNKSTAD
VAAFGDKLLTTTLQRMDKVYLIASRNHPIFKREITLETIAEYPYVNTDLGNPSSKLSPYQEFCLKSNIKLNTEITITSIS
SLFEYLGESQALSLLPYRVVYEMVSDVAELHTCQLSQLEAERLYAHAEAPTIFLVQKNQPSKVNDDLVWLSGQIKKIVDH
II
>Mature_322_residues
MHISNMDGLDILSLKILVSLYENKSATYVSKALDIPAPKISRSLKNLREIFGDELFIRRKYGLFPNEFATHLYPIAKEAI
ECTDKFHKARAANANLVKTHIEIAAPGLIAYAFPKALMQAIKDEQKLMHINITPWSMHTTQDIINGDTTLGICCNKSTAD
VAAFGDKLLTTTLQRMDKVYLIASRNHPIFKREITLETIAEYPYVNTDLGNPSSKLSPYQEFCLKSNIKLNTEITITSIS
SLFEYLGESQALSLLPYRVVYEMVSDVAELHTCQLSQLEAERLYAHAEAPTIFLVQKNQPSKVNDDLVWLSGQIKKIVDH
II

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36291; Mature: 36291

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISNMDGLDILSLKILVSLYENKSATYVSKALDIPAPKISRSLKNLREIFGDELFIRRK
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEHH
YGLFPNEFATHLYPIAKEAIECTDKFHKARAANANLVKTHIEIAAPGLIAYAFPKALMQA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHH
IKDEQKLMHINITPWSMHTTQDIINGDTTLGICCNKSTADVAAFGDKLLTTTLQRMDKVY
HCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEE
LIASRNHPIFKREITLETIAEYPYVNTDLGNPSSKLSPYQEFCLKSNIKLNTEITITSIS
EEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHCCCEECCEEEHHHHH
SLFEYLGESQALSLLPYRVVYEMVSDVAELHTCQLSQLEAERLYAHAEAPTIFLVQKNQP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
SKVNDDLVWLSGQIKKIVDHII
CCCCCCEEEECHHHHHHHHHCC
>Mature Secondary Structure
MHISNMDGLDILSLKILVSLYENKSATYVSKALDIPAPKISRSLKNLREIFGDELFIRRK
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEHH
YGLFPNEFATHLYPIAKEAIECTDKFHKARAANANLVKTHIEIAAPGLIAYAFPKALMQA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHHHH
IKDEQKLMHINITPWSMHTTQDIINGDTTLGICCNKSTADVAAFGDKLLTTTLQRMDKVY
HCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEE
LIASRNHPIFKREITLETIAEYPYVNTDLGNPSSKLSPYQEFCLKSNIKLNTEITITSIS
EEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHCCCEECCEEEHHHHH
SLFEYLGESQALSLLPYRVVYEMVSDVAELHTCQLSQLEAERLYAHAEAPTIFLVQKNQP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
SKVNDDLVWLSGQIKKIVDHII
CCCCCCEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA