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The map label for this gene is tsr [C]

Identifier: 160877376

GI number: 160877376

Start: 5053855

End: 5055726

Strand: Reverse

Name: tsr [C]

Synonym: Sbal195_4274

Alternate gene names: 160877376

Gene position: 5055726-5053855 (Counterclockwise)

Preceding gene: 160877378

Following gene: 160877373

Centisome position: 94.55

GC content: 49.36

Gene sequence:

>1872_bases
ATGAACTCATATTCGCTCAAGCAAAAAATTCTGTTCTCCGTCGTGGTAGCCCTTTCACTCGTGATTGGTTTGTTGTCATG
GCAAAGTTATTCCAGCCAAAAGTCTCAGCTGTTAAAAAACAGCCTAGAACAAGTGCAGCGCTTAGGTGAGCAGCAGGCTG
AGCGTATTCAAGAATGGTTGGCTGGCCGCCAAGATATTATGGGGGCACTGGCGAGCAAAGTTGAGGGTGATAGCCTAAAT
ACGTTACAACAAGCACAAGCGTCTGGCCGTTTCCAGTTGACCTATTTTGGGAGCCAAGCGGGGCAAATGCTGGATTCTGA
TCCGAGTGTAGACCGTACTGGTTATGATCCTCGTAGCCGTCCTTGGTATCAACAAGCCATCAGTGCACGCGGTCCTATCT
TGACTAAGCCTTACGTGGATGTGGCTTATAACATTCTGGTTGTGACTATGGCGCAGCCTACGGCACAAGGTGTTGTGGGT
GGTGACTTATCTATCGCGAGCCTAGTTGACGGTGTTAATCGGATGAAGTTACCGGCCAACGGTTATGCCATCATGATGCA
CAAAGACGGCACGGTTATCGCTTATAAAGATCAAGCGAAGACGATGAAACCTATAGGTGAAATCGACAACGATCTTAATC
GCAACTTGCCAGAACAGAGCCGTGCAGCGGGTACTCTGCTGCCTATGTATTTTGAAAATGAAGGACGCGACAAGTTAGTT
TGGAGCGTTGATATCCCCAATACAGATTGGGAATTAGTGTTAGTGCTTGATAAGGAAACGCTAGAAGCGCCACTGTCGAG
CCTGTTACTTACCCAACTGGGTTTATCGGCACTCGTACTGCTGTTGAGTGTGTTAGCGATTTCTTGGTTAGTTGGCATGT
TACTGGGTCCTTTGAGCCGAGTTTCGCAGGCACTGGCGCGTATTGCCGATGGTAATGGTGATTTAACTCAGCGTATTTCA
GTCGACACTCAAGATGAAGTGGGCGTGCTTGCCGATAGCTTTAACCGTTTTGTTGGTAGTCAACATCAGTTGATCAGCCA
TATTCGCCAGTTAGCGAATGAGTTAGATGCCGATGCTGAGCGTAGTCTGGCCACCACACAAACCTCGGTGACTGAACTAC
AACGTCAACAACAGGAAGTGGCGATGGTCGCGACCGCAGTAACAGAAATGGCGAGTGCCACCAATGAGATTGCGGCCAAT
GCTGAAAACACGGCAACGGCGGCTCAACAATCTGCCGCGAGCAGTTTACAGGGTAAAGAGTTAGTCAATAAAACCCGTAA
CTCGATTAATTCGCTGGCCGATGAAGTGACTCAAGCGACCGATGTCATTGCTGATTTGAGCCGTCACGCTCAATCAATTT
CAAGCATTCTAGCGACGATTCAAGGGATTGCAGAACAAACCAACTTGTTGGCGCTTAACGCTGCCATTGAGGCGGCGCGT
GCTGGTGAGCAGGGTCGTGGTTTTGCCGTGGTCGCCGATGAAGTGCGCGTGTTATCGCGTCGTACTCAAGATTCGACTCA
AGAAGTGCATACCACGATTGAAACACTGCAACGCACAACCGCCAGAGCCGTCAGCTTGATGGAAAGCAGCCAAGCATTAG
CGGGTCACAGTGTTGAAGATGCGAATGCGGCGGCAAAAGCCCTTGAAGAAATAACTCAAGCGGTCAACGTGATTTCAGAT
ATGGCAGGCCAGATTGCTACCGCAGCGGAAGAGCAGACTCAAGTGACGGGTGAAATCACCCAAAACACCGTTGCGATTAA
AGATGTGACCGATGAGATTACCGCATCGGCCATGGCTGATTTGGCACAGGCGCGTGGATTAAAAGCCCGTGCTAATGATC
TTAATGCACAAGTCGCGACCTTTATTCTGTAG

Upstream 100 bases:

>100_bases
TAACTCAGTTTGCCGCTTTATTAAATTAGTTTTAAATGTTCGTTCAACTCGCTCAGACACCCTCTTGTTTCACTGCTTTG
TTAATAAATTAGACGCCAAC

Downstream 100 bases:

>100_bases
CCACTATTTGTAGCGCTTCACTTTGATAAGAGCCCGATAACGCCTTTGCTTTATCGGGCTTTTTTATTGATAGTGATTTG
GTGTTTCATACCAATCGTAT

Product: Cache sensor containing methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MNSYSLKQKILFSVVVALSLVIGLLSWQSYSSQKSQLLKNSLEQVQRLGEQQAERIQEWLAGRQDIMGALASKVEGDSLN
TLQQAQASGRFQLTYFGSQAGQMLDSDPSVDRTGYDPRSRPWYQQAISARGPILTKPYVDVAYNILVVTMAQPTAQGVVG
GDLSIASLVDGVNRMKLPANGYAIMMHKDGTVIAYKDQAKTMKPIGEIDNDLNRNLPEQSRAAGTLLPMYFENEGRDKLV
WSVDIPNTDWELVLVLDKETLEAPLSSLLLTQLGLSALVLLLSVLAISWLVGMLLGPLSRVSQALARIADGNGDLTQRIS
VDTQDEVGVLADSFNRFVGSQHQLISHIRQLANELDADAERSLATTQTSVTELQRQQQEVAMVATAVTEMASATNEIAAN
AENTATAAQQSAASSLQGKELVNKTRNSINSLADEVTQATDVIADLSRHAQSISSILATIQGIAEQTNLLALNAAIEAAR
AGEQGRGFAVVADEVRVLSRRTQDSTQEVHTTIETLQRTTARAVSLMESSQALAGHSVEDANAAAKALEEITQAVNVISD
MAGQIATAAEEQTQVTGEITQNTVAIKDVTDEITASAMADLAQARGLKARANDLNAQVATFIL

Sequences:

>Translated_623_residues
MNSYSLKQKILFSVVVALSLVIGLLSWQSYSSQKSQLLKNSLEQVQRLGEQQAERIQEWLAGRQDIMGALASKVEGDSLN
TLQQAQASGRFQLTYFGSQAGQMLDSDPSVDRTGYDPRSRPWYQQAISARGPILTKPYVDVAYNILVVTMAQPTAQGVVG
GDLSIASLVDGVNRMKLPANGYAIMMHKDGTVIAYKDQAKTMKPIGEIDNDLNRNLPEQSRAAGTLLPMYFENEGRDKLV
WSVDIPNTDWELVLVLDKETLEAPLSSLLLTQLGLSALVLLLSVLAISWLVGMLLGPLSRVSQALARIADGNGDLTQRIS
VDTQDEVGVLADSFNRFVGSQHQLISHIRQLANELDADAERSLATTQTSVTELQRQQQEVAMVATAVTEMASATNEIAAN
AENTATAAQQSAASSLQGKELVNKTRNSINSLADEVTQATDVIADLSRHAQSISSILATIQGIAEQTNLLALNAAIEAAR
AGEQGRGFAVVADEVRVLSRRTQDSTQEVHTTIETLQRTTARAVSLMESSQALAGHSVEDANAAAKALEEITQAVNVISD
MAGQIATAAEEQTQVTGEITQNTVAIKDVTDEITASAMADLAQARGLKARANDLNAQVATFIL
>Mature_623_residues
MNSYSLKQKILFSVVVALSLVIGLLSWQSYSSQKSQLLKNSLEQVQRLGEQQAERIQEWLAGRQDIMGALASKVEGDSLN
TLQQAQASGRFQLTYFGSQAGQMLDSDPSVDRTGYDPRSRPWYQQAISARGPILTKPYVDVAYNILVVTMAQPTAQGVVG
GDLSIASLVDGVNRMKLPANGYAIMMHKDGTVIAYKDQAKTMKPIGEIDNDLNRNLPEQSRAAGTLLPMYFENEGRDKLV
WSVDIPNTDWELVLVLDKETLEAPLSSLLLTQLGLSALVLLLSVLAISWLVGMLLGPLSRVSQALARIADGNGDLTQRIS
VDTQDEVGVLADSFNRFVGSQHQLISHIRQLANELDADAERSLATTQTSVTELQRQQQEVAMVATAVTEMASATNEIAAN
AENTATAAQQSAASSLQGKELVNKTRNSINSLADEVTQATDVIADLSRHAQSISSILATIQGIAEQTNLLALNAAIEAAR
AGEQGRGFAVVADEVRVLSRRTQDSTQEVHTTIETLQRTTARAVSLMESSQALAGHSVEDANAAAKALEEITQAVNVISD
MAGQIATAAEEQTQVTGEITQNTVAIKDVTDEITASAMADLAQARGLKARANDLNAQVATFIL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=302, Percent_Identity=32.1192052980132, Blast_Score=131, Evalue=2e-31,
Organism=Escherichia coli, GI1788195, Length=285, Percent_Identity=32.6315789473684, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1788194, Length=389, Percent_Identity=28.2776349614396, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1787690, Length=334, Percent_Identity=30.5389221556886, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1789453, Length=311, Percent_Identity=29.903536977492, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 66955; Mature: 66955

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYSLKQKILFSVVVALSLVIGLLSWQSYSSQKSQLLKNSLEQVQRLGEQQAERIQEWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRQDIMGALASKVEGDSLNTLQQAQASGRFQLTYFGSQAGQMLDSDPSVDRTGYDPRSR
HCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCHHCHHCCCCCCCCCCCCCCCCC
PWYQQAISARGPILTKPYVDVAYNILVVTMAQPTAQGVVGGDLSIASLVDGVNRMKLPAN
CHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCHHHCCCCCC
GYAIMMHKDGTVIAYKDQAKTMKPIGEIDNDLNRNLPEQSRAAGTLLPMYFENEGRDKLV
CEEEEEECCCCEEEECCCHHHHHHHHHHCCHHHCCCCHHHHHCCCEEEEEECCCCCCEEE
WSVDIPNTDWELVLVLDKETLEAPLSSLLLTQLGLSALVLLLSVLAISWLVGMLLGPLSR
EEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSQALARIADGNGDLTQRISVDTQDEVGVLADSFNRFVGSQHQLISHIRQLANELDADAE
HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
RSLATTQTSVTELQRQQQEVAMVATAVTEMASATNEIAANAENTATAAQQSAASSLQGKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
LVNKTRNSINSLADEVTQATDVIADLSRHAQSISSILATIQGIAEQTNLLALNAAIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGEQGRGFAVVADEVRVLSRRTQDSTQEVHTTIETLQRTTARAVSLMESSQALAGHSVED
CCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ANAAAKALEEITQAVNVISDMAGQIATAAEEQTQVTGEITQNTVAIKDVTDEITASAMAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHH
LAQARGLKARANDLNAQVATFIL
HHHHCCCCHHHHHCCHHHHHHCC
>Mature Secondary Structure
MNSYSLKQKILFSVVVALSLVIGLLSWQSYSSQKSQLLKNSLEQVQRLGEQQAERIQEWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRQDIMGALASKVEGDSLNTLQQAQASGRFQLTYFGSQAGQMLDSDPSVDRTGYDPRSR
HCHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCHHCHHCCCCCCCCCCCCCCCCC
PWYQQAISARGPILTKPYVDVAYNILVVTMAQPTAQGVVGGDLSIASLVDGVNRMKLPAN
CHHHHHHHCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCHHHCCCCCC
GYAIMMHKDGTVIAYKDQAKTMKPIGEIDNDLNRNLPEQSRAAGTLLPMYFENEGRDKLV
CEEEEEECCCCEEEECCCHHHHHHHHHHCCHHHCCCCHHHHHCCCEEEEEECCCCCCEEE
WSVDIPNTDWELVLVLDKETLEAPLSSLLLTQLGLSALVLLLSVLAISWLVGMLLGPLSR
EEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSQALARIADGNGDLTQRISVDTQDEVGVLADSFNRFVGSQHQLISHIRQLANELDADAE
HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
RSLATTQTSVTELQRQQQEVAMVATAVTEMASATNEIAANAENTATAAQQSAASSLQGKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
LVNKTRNSINSLADEVTQATDVIADLSRHAQSISSILATIQGIAEQTNLLALNAAIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGEQGRGFAVVADEVRVLSRRTQDSTQEVHTTIETLQRTTARAVSLMESSQALAGHSVED
CCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ANAAAKALEEITQAVNVISDMAGQIATAAEEQTQVTGEITQNTVAIKDVTDEITASAMAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHH
LAQARGLKARANDLNAQVATFIL
HHHHCCCCHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA