| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877372
Identifier: 160877372
GI number: 160877372
Start: 5050415
End: 5050960
Strand: Reverse
Name: 160877372
Synonym: Sbal195_4270
Alternate gene names: NA
Gene position: 5050960-5050415 (Counterclockwise)
Preceding gene: 160877373
Following gene: 160877370
Centisome position: 94.46
GC content: 46.7
Gene sequence:
>546_bases ATGACTCAGTTGGTGGTTTTACAGCACCCGAGTGAAGTCGAACATAAAAAAAATAGTGTGCGGGTATTGAGTCTTGTTGT TGCTGAAACGCAAGTTTATGTGGGCGAAAGCGAGGCCGACTTCAATGGTTTACGGGAACATTTAACGGCGTGTAATAAGC CGATTTATCTCGTCTATCCCTCTGAGCAAAGTGTGAGTGTTGAACAGCAGCCTATCAATCCAGATTGTGTATTGCTCTTA CTCGATGGTACTTGGCGCAAGGCGTTTAAGATGTTGCAGCTGAATCCTTGGTTAACCCAGTATCCTGCGGTGCATTTGGC TGAAGGTTATGAGTCGCGCTACCGGATCCGTAAGTCGAGTCGTAGCGACAGTTTATCGACCTTAGAAGCTTGTGCTTATA TGCTAAGCGCTCTTGAGCCTAGGCTTGATGTTCAGCCGTTAATGACGGCATTTGATGCTATGGTTGAACTGCGGATTAAG GCGATGCCGAGCACTGTGCAGGCTCGTTATCAGAACTCAAACAAACCTAACTGCGAGACTAAGTGA
Upstream 100 bases:
>100_bases TTACTTAAACCGAGTGTAAAGCTTGTCCCGTCACTATTGTGCTATTTGTCGTTATCCCCAGAATGCTTGCCTGTGTGCGA GTGTTCTGCCTATTTCTCCA
Downstream 100 bases:
>100_bases ATGTTTTGACATTATTTAGCCTTAGAGGTTTTAGGTCTGAATTAATGCTTTTAAGTTATTGCAGTTTTGATACTGCGTAC GAATTAAATTAGTCAAAATC
Product: DTW domain-containing protein
Products: NA
Alternate protein names: DTW Domain Containing Protein; DTW Domain Protein; Cytoplasmic Protein; DTW Domain; Dtw Domain Protein; DTW Protein
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTQLVVLQHPSEVEHKKNSVRVLSLVVAETQVYVGESEADFNGLREHLTACNKPIYLVYPSEQSVSVEQQPINPDCVLLL LDGTWRKAFKMLQLNPWLTQYPAVHLAEGYESRYRIRKSSRSDSLSTLEACAYMLSALEPRLDVQPLMTAFDAMVELRIK AMPSTVQARYQNSNKPNCETK
Sequences:
>Translated_181_residues MTQLVVLQHPSEVEHKKNSVRVLSLVVAETQVYVGESEADFNGLREHLTACNKPIYLVYPSEQSVSVEQQPINPDCVLLL LDGTWRKAFKMLQLNPWLTQYPAVHLAEGYESRYRIRKSSRSDSLSTLEACAYMLSALEPRLDVQPLMTAFDAMVELRIK AMPSTVQARYQNSNKPNCETK >Mature_180_residues TQLVVLQHPSEVEHKKNSVRVLSLVVAETQVYVGESEADFNGLREHLTACNKPIYLVYPSEQSVSVEQQPINPDCVLLLL DGTWRKAFKMLQLNPWLTQYPAVHLAEGYESRYRIRKSSRSDSLSTLEACAYMLSALEPRLDVQPLMTAFDAMVELRIKA MPSTVQARYQNSNKPNCETK
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20573; Mature: 20442
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLVVLQHPSEVEHKKNSVRVLSLVVAETQVYVGESEADFNGLREHLTACNKPIYLVYP CCEEEEEECCCHHHHHHCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCEEEEEC SEQSVSVEQQPINPDCVLLLLDGTWRKAFKMLQLNPWLTQYPAVHLAEGYESRYRIRKSS CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHCCHHHHHHCHHHHHHHHHCC RSDSLSTLEACAYMLSALEPRLDVQPLMTAFDAMVELRIKAMPSTVQARYQNSNKPNCET CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC K C >Mature Secondary Structure TQLVVLQHPSEVEHKKNSVRVLSLVVAETQVYVGESEADFNGLREHLTACNKPIYLVYP CEEEEEECCCHHHHHHCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCEEEEEC SEQSVSVEQQPINPDCVLLLLDGTWRKAFKMLQLNPWLTQYPAVHLAEGYESRYRIRKSS CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCHHHCCHHHHHHCHHHHHHHHHCC RSDSLSTLEACAYMLSALEPRLDVQPLMTAFDAMVELRIKAMPSTVQARYQNSNKPNCET CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA