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The map label for this gene is yjjU [H]

Identifier: 160877345

GI number: 160877345

Start: 5021878

End: 5022759

Strand: Direct

Name: yjjU [H]

Synonym: Sbal195_4243

Alternate gene names: 160877345

Gene position: 5021878-5022759 (Clockwise)

Preceding gene: 160877344

Following gene: 160877349

Centisome position: 93.91

GC content: 47.62

Gene sequence:

>882_bases
ATGAAAGATGTGGCCTTAGTGTTGGAAGGTGGCGGCCTCAGAGCCATTTATACCGCAGGTGTGTTAGACGCGTTTTTGCA
GCAGTCGCTCAACTTCAGCTATGTGATTGGGGTGTCTGCGGGTGCCATTTATCCCGCGTCCTATGTGTCCCGCCAATTTG
GGCGTAATCTTCAAATTCAGCAGCAATATCTCAACGATAAACGCTATATGGGCCTGCGCCATTGGTTGGCAACAGGCAAC
TATGTCAATACCGACTTTACCTATCGCCGCATGGCCTATGAGTTACTGCCATTTGATTTTGATACATTTTTAAATAGTCA
TACCGAATTTAAGGTCGGCGCCTTTAACTGCAATACAGGGAAAACCGATTACTTCGGTATGGCCGATTTTAATGACCACG
ATAAATTACTCGACGTGCTCATCGCCTCCTCTAGCCTGCCTTTTATGTCTAAACCCAGCGTGATTAACCAACACCATTAT
CTCGATGGCGGCATCGGCGAACCGATACCGTTAGCGCAATCACGCAAAGATGGTTATGCACGCCAAGTGGTGATCTTGAC
TCAAGATCAGCATTACCAAAAATCCGCGATGAAAATTAATTGGTTAGCTCATAAAGCCTATAAACGCTACCCCGCAGTTG
CCCATGCGTTAAGTGAGCGCCACCGAGTTTATAATCAAGCATTAGCCGAGTTAGACCAAGCCGTTGCAGCGAATAACGCC
TTTGTGATCCGCCCAGCACTGCCGCTTAATTTATCCAGGCTCGATCGCAATATCGATAAAGTGACCGCCGTCTATCAACA
AGGGCTAGCGGATGGAAAAGCAGTCTTACCCACATTAACCGCTTGGTTAACGGCGTCAAAAGAGCCTAAACCCGAGGCGT
AA

Upstream 100 bases:

>100_bases
CCAACGTCGATCACGCATCTTAAGTGTGCCTTTTGCGCATTCATTTCTGCGCTAAGCTGGGGTATTCTGCTGGGATGAAC
CGATAAAAAGATGTAACTCG

Downstream 100 bases:

>100_bases
TCGACGGCAGCACTTGGCTTATGATCAACTCACGTAGCCATTTATGGCTCAAGTCATGCTCGAAGTGTTTATGCCACATC
AATAAATACGCGCCAGGGAT

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQQQYLNDKRYMGLRHWLATGN
YVNTDFTYRRMAYELLPFDFDTFLNSHTEFKVGAFNCNTGKTDYFGMADFNDHDKLLDVLIASSSLPFMSKPSVINQHHY
LDGGIGEPIPLAQSRKDGYARQVVILTQDQHYQKSAMKINWLAHKAYKRYPAVAHALSERHRVYNQALAELDQAVAANNA
FVIRPALPLNLSRLDRNIDKVTAVYQQGLADGKAVLPTLTAWLTASKEPKPEA

Sequences:

>Translated_293_residues
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQQQYLNDKRYMGLRHWLATGN
YVNTDFTYRRMAYELLPFDFDTFLNSHTEFKVGAFNCNTGKTDYFGMADFNDHDKLLDVLIASSSLPFMSKPSVINQHHY
LDGGIGEPIPLAQSRKDGYARQVVILTQDQHYQKSAMKINWLAHKAYKRYPAVAHALSERHRVYNQALAELDQAVAANNA
FVIRPALPLNLSRLDRNIDKVTAVYQQGLADGKAVLPTLTAWLTASKEPKPEA
>Mature_293_residues
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQQQYLNDKRYMGLRHWLATGN
YVNTDFTYRRMAYELLPFDFDTFLNSHTEFKVGAFNCNTGKTDYFGMADFNDHDKLLDVLIASSSLPFMSKPSVINQHHY
LDGGIGEPIPLAQSRKDGYARQVVILTQDQHYQKSAMKINWLAHKAYKRYPAVAHALSERHRVYNQALAELDQAVAANNA
FVIRPALPLNLSRLDRNIDKVTAVYQQGLADGKAVLPTLTAWLTASKEPKPEA

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=290, Percent_Identity=26.8965517241379, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32871; Mature: 32871

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQ
CCCEEEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCCHH
QQYLNDKRYMGLRHWLATGNYVNTDFTYRRMAYELLPFDFDTFLNSHTEFKVGAFNCNTG
HHHHCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCC
KTDYFGMADFNDHDKLLDVLIASSSLPFMSKPSVINQHHYLDGGIGEPIPLAQSRKDGYA
CCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCE
RQVVILTQDQHYQKSAMKINWLAHKAYKRYPAVAHALSERHRVYNQALAELDQAVAANNA
EEEEEEECCCCHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVIRPALPLNLSRLDRNIDKVTAVYQQGLADGKAVLPTLTAWLTASKEPKPEA
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQ
CCCEEEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCCHH
QQYLNDKRYMGLRHWLATGNYVNTDFTYRRMAYELLPFDFDTFLNSHTEFKVGAFNCNTG
HHHHCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCC
KTDYFGMADFNDHDKLLDVLIASSSLPFMSKPSVINQHHYLDGGIGEPIPLAQSRKDGYA
CCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCE
RQVVILTQDQHYQKSAMKINWLAHKAYKRYPAVAHALSERHRVYNQALAELDQAVAANNA
EEEEEEECCCCHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVIRPALPLNLSRLDRNIDKVTAVYQQGLADGKAVLPTLTAWLTASKEPKPEA
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]