| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877207
Identifier: 160877207
GI number: 160877207
Start: 4857659
End: 4858366
Strand: Direct
Name: 160877207
Synonym: Sbal195_4103
Alternate gene names: NA
Gene position: 4857659-4858366 (Clockwise)
Preceding gene: 160877206
Following gene: 160877208
Centisome position: 90.84
GC content: 42.37
Gene sequence:
>708_bases ATGAACGGCAGACTTGGTTATAAACATTCATTATTGCGAGTCTGCCGCTTTAGCCTCATAGCGTCAGCCTTAGGCATATG CTGCCTATATGCTGCCCCCACACAAAACCTTGATGAAGGGAAGATCACTTCAACCCTTGAAAAACATTATGGTGAGCGTG CAGGGATGCGAGCTAGGGCTTGGTTCAAAGTGTTATCGGAAGCAAGTACGCTAGATGAAAAAGAAAAGCTATTGAAAGTA AATAACTTTTTTAACTTATTCCGCTTTATTGATGACAGTAAATTATGGGGTGAGTCGAATTATTGGGCAACGCCGATGGA GTTTATTGGCGTGAATGGTGGTGACTGCGAAGATTTTTCGATCGCTAAATACTTCACCTTGCTCCAACTTGGCGTGCAAG AGGACAAGATGCGGATCACTATGGTTAAAGCGACTACGGTAAATCAATACCACATGGTATTGGCTTACTATGAGACACCA GCATCGATCCCCTTAGTTCTCGATAATCTTGATCATGAAATAAAGCCCGCCACCAAAAGAAAAGATCTACTACCTGTTTA TAGCTTTAACGGTAAACAGTTATGGCTCAATAAAGAGCAAGGTCGAGGTGTACTAGCAGGTTCGTCAACACGGCTAGAAA AATGGAACGATCTTAACCATAGATTAGGTGTTGACCGCCTTAGACAACCAAAATTAAAACTGGAGTAG
Upstream 100 bases:
>100_bases GTCGTGGCTGAAGTGACCGGTGATGATACGGCCACGGACATGAAATGGACGATTTACTCGGTCGATGACAACACACAATA AAGGACTCACACATTAGGTT
Downstream 100 bases:
>100_bases CACCAAAAATGACACTGTTTAGACAGATTTATTCGCTGCTTTTTAGCCTATTTTTGCTCGTAGTTGCAAGCCTTGGCTAT GTGCAATTTACTGAGACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Family Protein Cysteine Peptidase BTLCP; Periplasmic Protein-Like Protein; Sulfate Adenylyltransferase Small Subunit; Transglutaminase Domain Protein; OmpA/MotB; Sulfate Adenylyltransferase; Lipoprotein
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MNGRLGYKHSLLRVCRFSLIASALGICCLYAAPTQNLDEGKITSTLEKHYGERAGMRARAWFKVLSEASTLDEKEKLLKV NNFFNLFRFIDDSKLWGESNYWATPMEFIGVNGGDCEDFSIAKYFTLLQLGVQEDKMRITMVKATTVNQYHMVLAYYETP ASIPLVLDNLDHEIKPATKRKDLLPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE
Sequences:
>Translated_235_residues MNGRLGYKHSLLRVCRFSLIASALGICCLYAAPTQNLDEGKITSTLEKHYGERAGMRARAWFKVLSEASTLDEKEKLLKV NNFFNLFRFIDDSKLWGESNYWATPMEFIGVNGGDCEDFSIAKYFTLLQLGVQEDKMRITMVKATTVNQYHMVLAYYETP ASIPLVLDNLDHEIKPATKRKDLLPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE >Mature_235_residues MNGRLGYKHSLLRVCRFSLIASALGICCLYAAPTQNLDEGKITSTLEKHYGERAGMRARAWFKVLSEASTLDEKEKLLKV NNFFNLFRFIDDSKLWGESNYWATPMEFIGVNGGDCEDFSIAKYFTLLQLGVQEDKMRITMVKATTVNQYHMVLAYYETP ASIPLVLDNLDHEIKPATKRKDLLPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26928; Mature: 26928
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGRLGYKHSLLRVCRFSLIASALGICCLYAAPTQNLDEGKITSTLEKHYGERAGMRARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH WFKVLSEASTLDEKEKLLKVNNFFNLFRFIDDSKLWGESNYWATPMEFIGVNGGDCEDFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEECCCCCCCCHH IAKYFTLLQLGVQEDKMRITMVKATTVNQYHMVLAYYETPASIPLVLDNLDHEIKPATKR HHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCC KDLLPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE CCCCEEEECCCCEEEEECCCCCEEEECCCCCHHHHHCCHHHCCHHHHCCCCCCCC >Mature Secondary Structure MNGRLGYKHSLLRVCRFSLIASALGICCLYAAPTQNLDEGKITSTLEKHYGERAGMRARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH WFKVLSEASTLDEKEKLLKVNNFFNLFRFIDDSKLWGESNYWATPMEFIGVNGGDCEDFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEECCCCCCCCHH IAKYFTLLQLGVQEDKMRITMVKATTVNQYHMVLAYYETPASIPLVLDNLDHEIKPATKR HHHHHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCC KDLLPVYSFNGKQLWLNKEQGRGVLAGSSTRLEKWNDLNHRLGVDRLRQPKLKLE CCCCEEEECCCCEEEEECCCCCEEEECCCCCHHHHHCCHHHCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA