Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is prmA [H]
Identifier: 160877183
GI number: 160877183
Start: 4811471
End: 4812352
Strand: Direct
Name: prmA [H]
Synonym: Sbal195_4079
Alternate gene names: 160877183
Gene position: 4811471-4812352 (Clockwise)
Preceding gene: 160877178
Following gene: 160877184
Centisome position: 89.98
GC content: 51.59
Gene sequence:
>882_bases ATGCCTTGGATCCAACTCCGTATAAACACCAATAGCGATGACGCTGAAACCATCAGCGACTTGCTCATGGAAGAAGGCTC AGTCTCTATCACCTTCGAAGACGGTAAAGACACCCCTATTTTTGAACCTAAACTGGGCGAAACCCCACTGTGGCGCGATA CCGTTGTCGTTGCCTTATTCGATGCAGAAACCGATCTGACACCGACCATCGCCATGTTGAAAACCTTGCCTTTCCTCGGC GAGAACTTCAGCCATAAAGTCGAACAAATTGAAGATAAAGACTGGGTGCGTGAGTGGATGGATAACTTCCACCCCATCCA ATTCGGCACGCGTCTGTGGATCTGCCCAAGCTGGCGCGAGATCCCCGATCCAACCGCAGTCAATGTGATCCTCGATCCAG GTCTTGCCTTCGGCACAGGCACTCACCCTACGACAGCACTGTGTTTAGAGTGGCTAGACAGCTTAGATTTAAGCGATGAA GAAGTGATCGACTTTGGCTGTGGCTCTGGCATCTTAGCCGTAGCCGCACTAAAACTGGGCGCGAAAAACGTCACAGGTAT CGATATCGACTATCAAGCCATCGACGCCTCACGTGCCAACGCCGAGCGCAATGATGTCGCCGACAAGCTAGCCTTGTACT TACCTGAAGACCAACCCGCCGATCTCAAAGCCGACGTACTGGTCGCCAATATTCTTGCCGGCCCACTGCGTGAACTAGCG CCTTTGATCGCAGAACGCGTAAAAACCAGTGGCAAACTTGCCCTTTCCGGTCTCCTCAAAGAACAAGCCCAAGAAATCTC TGACTTTTATAGCCAATGGTTCGATATGGACGCAGCGGCTCACAAAGAAGATTGGAGCCGCTTGACAGGCAAGCGTAAAT AG
Upstream 100 bases:
>100_bases CTATGCCACGATAGTCAGTCGCAGAACCTTAAGCCATGGTTTACAATAGCGCGATATTTTGAACCCTTAGCTTTTGCACA CTCAGCCACAGGATGCCCCC
Downstream 100 bases:
>100_bases CGCTAAAGGGTGGCGCAACATGCGCCACCGCTGGCTTCCAACTATTCAGCCTCTGACTTCTCGCCGATTAAAAGTCAAGA AAAAAAATTACATCTAGGTC
Product: 50S ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPWIQLRINTNSDDAETISDLLMEEGSVSITFEDGKDTPIFEPKLGETPLWRDTVVVALFDAETDLTPTIAMLKTLPFLG ENFSHKVEQIEDKDWVREWMDNFHPIQFGTRLWICPSWREIPDPTAVNVILDPGLAFGTGTHPTTALCLEWLDSLDLSDE EVIDFGCGSGILAVAALKLGAKNVTGIDIDYQAIDASRANAERNDVADKLALYLPEDQPADLKADVLVANILAGPLRELA PLIAERVKTSGKLALSGLLKEQAQEISDFYSQWFDMDAAAHKEDWSRLTGKRK
Sequences:
>Translated_293_residues MPWIQLRINTNSDDAETISDLLMEEGSVSITFEDGKDTPIFEPKLGETPLWRDTVVVALFDAETDLTPTIAMLKTLPFLG ENFSHKVEQIEDKDWVREWMDNFHPIQFGTRLWICPSWREIPDPTAVNVILDPGLAFGTGTHPTTALCLEWLDSLDLSDE EVIDFGCGSGILAVAALKLGAKNVTGIDIDYQAIDASRANAERNDVADKLALYLPEDQPADLKADVLVANILAGPLRELA PLIAERVKTSGKLALSGLLKEQAQEISDFYSQWFDMDAAAHKEDWSRLTGKRK >Mature_292_residues PWIQLRINTNSDDAETISDLLMEEGSVSITFEDGKDTPIFEPKLGETPLWRDTVVVALFDAETDLTPTIAMLKTLPFLGE NFSHKVEQIEDKDWVREWMDNFHPIQFGTRLWICPSWREIPDPTAVNVILDPGLAFGTGTHPTTALCLEWLDSLDLSDEE VIDFGCGSGILAVAALKLGAKNVTGIDIDYQAIDASRANAERNDVADKLALYLPEDQPADLKADVLVANILAGPLRELAP LIAERVKTSGKLALSGLLKEQAQEISDFYSQWFDMDAAAHKEDWSRLTGKRK
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
Organism=Escherichia coli, GI2367208, Length=293, Percent_Identity=65.1877133105802, Blast_Score=375, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 32526; Mature: 32395
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWIQLRINTNSDDAETISDLLMEEGSVSITFEDGKDTPIFEPKLGETPLWRDTVVVALF CCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE DAETDLTPTIAMLKTLPFLGENFSHKVEQIEDKDWVREWMDNFHPIQFGTRLWICPSWRE CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCEEECCEEEECCCCCC IPDPTAVNVILDPGLAFGTGTHPTTALCLEWLDSLDLSDEEVIDFGCGSGILAVAALKLG CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEECCCCCHHHHHHHHHHC AKNVTGIDIDYQAIDASRANAERNDVADKLALYLPEDQPADLKADVLVANILAGPLRELA CCCCCCCCCCHHHHCCHHCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHH PLIAERVKTSGKLALSGLLKEQAQEISDFYSQWFDMDAAAHKEDWSRLTGKRK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure PWIQLRINTNSDDAETISDLLMEEGSVSITFEDGKDTPIFEPKLGETPLWRDTVVVALF CEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE DAETDLTPTIAMLKTLPFLGENFSHKVEQIEDKDWVREWMDNFHPIQFGTRLWICPSWRE CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCEEECCEEEECCCCCC IPDPTAVNVILDPGLAFGTGTHPTTALCLEWLDSLDLSDEEVIDFGCGSGILAVAALKLG CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEECCCCCHHHHHHHHHHC AKNVTGIDIDYQAIDASRANAERNDVADKLALYLPEDQPADLKADVLVANILAGPLRELA CCCCCCCCCCHHHHCCHHCCCHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHH PLIAERVKTSGKLALSGLLKEQAQEISDFYSQWFDMDAAAHKEDWSRLTGKRK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA