Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160877171
Identifier: 160877171
GI number: 160877171
Start: 4799406
End: 4799942
Strand: Direct
Name: 160877171
Synonym: Sbal195_4067
Alternate gene names: NA
Gene position: 4799406-4799942 (Clockwise)
Preceding gene: 160877170
Following gene: 160877174
Centisome position: 89.75
GC content: 44.51
Gene sequence:
>537_bases ATGCACAATAACGTTAAGGCATTCCTAGCCACTACTGCCTTATTTTTTAGTTGTCAGGTACTAGCCAATGGTGGCTGTGG ATTTGAAGAACAACAACAGGGCTTAATTGCGACCTGCAGCGAGGAGAAACAAGAAGTGATTTTAACTGGCATAGTCGAAG CACAACATTTAGTCACAGATCTCAATGAGTTTGCCGAAGGGTATAAAAGCTACCAGGTCGACACTGCGGCAATCACTCCG CTTAAAAGCGTCACCGAACCAACTGAAATTATTGTGATCATTGGTACTTGGTGTCCAGATTGTCACCGTGAAACACCGCG CTTTATCCGTATCATGGAAGAAGTCGCCAATCCCAATATCAAAGTGACCTATATTGGTGTCGACCGGACGAAGAAAGATC CCGAAGGCTTAGCTGCCAAATACGACTTTACCCGTATTCCAACCTTTATTGTGCTACAGCAAGGTAAAGAAGTTGGCCGT ATCGTAGAGCGCCCAACCGTTTCCTTAGAGAAAGATCTCGCCGATTTATTGAAATAA
Upstream 100 bases:
>100_bases CGTGATCTAGCTTGCAGCAAATCAATAATCCGCTTTAATCGCATCGAGAATAATGTTTGAATCAAGCTTCATTCTTTCTC TTCGATTTTAAGGGCGCATC
Downstream 100 bases:
>100_bases GCGACGCAGTACACAATAAAGGCCGCATAGCGGCCTTTGGTTTTTATCATGTTTCAATAAAATATTAGCTCGCTTCGTCA ATAATTCGCTGCGCGAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin-Like Protein
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTDLNEFAEGYKSYQVDTAAITP LKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNIKVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGR IVERPTVSLEKDLADLLK
Sequences:
>Translated_178_residues MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTDLNEFAEGYKSYQVDTAAITP LKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNIKVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGR IVERPTVSLEKDLADLLK >Mature_178_residues MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTDLNEFAEGYKSYQVDTAAITP LKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNIKVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGR IVERPTVSLEKDLADLLK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19831; Mature: 19831
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTD CCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH LNEFAEGYKSYQVDTAAITPLKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNI HHHHHHHHHHCCCCHHHHCCHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCE KVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGRIVERPTVSLEKDLADLLK EEEEEECCCCCCCCCCCEEECCHHHCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MHNNVKAFLATTALFFSCQVLANGGCGFEEQQQGLIATCSEEKQEVILTGIVEAQHLVTD CCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH LNEFAEGYKSYQVDTAAITPLKSVTEPTEIIVIIGTWCPDCHRETPRFIRIMEEVANPNI HHHHHHHHHHCCCCHHHHCCHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCE KVTYIGVDRTKKDPEGLAAKYDFTRIPTFIVLQQGKEVGRIVERPTVSLEKDLADLLK EEEEEECCCCCCCCCCCEEECCHHHCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA