| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is purH [H]
Identifier: 160877140
GI number: 160877140
Start: 4747653
End: 4749251
Strand: Direct
Name: purH [H]
Synonym: Sbal195_4036
Alternate gene names: 160877140
Gene position: 4747653-4749251 (Clockwise)
Preceding gene: 160877137
Following gene: 160877141
Centisome position: 88.79
GC content: 51.53
Gene sequence:
>1599_bases ATGACTGCTGCAAATAATGCCAGACCCATTCGTCGCGCGCTGTTAAGCGTTTCAGATAAAACCGGAATTCTCGAGTTCGC CAAAGCACTTCACGCCCAAGGTGTGGAACTGTTATCAACTGGCGGCACCGCTCGCCTGTTAGCGGATAACGGCGTGCCTG TTATCGAAGTATCTGATTACACAGGACACCCTGAGATCATGGACGGTCGCGTTAAGACGCTGCACCCTAAAGTGCACGGC GGCATTTTGGCGCGCCGCGGTCTTGATGAAAGCGTTATGGCCGACAACAATATCAACGCCATCGATCTGGTTGCGGTTAA CCTTTATCCTTTCGCTGAAACCGTAGCTAAAGCCGGTTGTACCTTAGAGGACGCTATCGAAAATATCGATATTGGCGGCC CAACTATGGTGCGCGCAGCGGCAAAAAACCACAAAGACGTCACCATAGTCGTTAATGCCGCCGATTACTCACGCGTACTG GCAGAAATGACGGCTAACAATGGCAGCACGACCCATGCGACGCGTTTCGACTTAGCGATTGCAGCCTTTGAGCACACTGC GGGTTACGATGGCATGATCGCCAACTACTTCGGCACTATGGTTCCTGCACACAGCACGGACGAATGCTTTGCTGATTCTA AGTTCCCACGCACGTTCAACACCCAATTAGTGAAGAAGCAAGACTTACGCTATGGCGAAAACAGCCATCAAGCGGCGGCC TTCTATGTCGACACTAAAATTGATGAAGCCTCTGTGGCGACGGCAATTCAGTTGCAAGGCAAAGCTTTGTCTTACAACAA CATTGCCGATACAGACGCCGCTCTTGAGTGCGTAAAAGAATTCTTGGAACCTGCCTGCGTTATCGTTAAACACGCTAACC CATGTGGTGTGGCCTTAGGTAAAGACTTGCTCGATGCCTATAACCGCGCTTATCAAACAGACCCAACGTCAGCCTTCGGT GGCATTATTGCTTTCAACGGCGAGTTAGATGCCGCGACGGCGAGTGCTATCGTTGAGCGTCAATTCGTTGAAGTGATTAT CGCCCCAAGCGTCAGCCAAGCGGCGCGCGATGTGGTGGCGAAAAAGACCAACGTACGTTTATTGGAATGTGGTCAGTGGA ACACTAAGACCCAAACCTTAGACTTCAAACGCGTTAACGGCGGCTTGTTAGTACAAGATCGCGACCAAGGCATGGTCGGC TTAGAAGACATCAAAGTGGTTTCTAAACGTCAACCAACTGCAAGCGAACTGAAAGACTTAATGTTCTGCTGGAAAGTAGC GAAATTCGTTAAATCTAACGCCATCGTTTATGCAAAAGACGGCATGACTATCGGTGTCGGCGCAGGCCAAATGAGCCGCG TTTACAGCGCTAAAATCGCTGGCATCAAGGCCGCCGACGAAGGTTTAGAAGTAGTGAACTCTGTGATGGCATCCGATGCT TTCTTCCCCTTCCGTGACGGTATCGATGCCGCAGCGGCTGCGGGCATTAGCTGCATCATCCAACCGGGTGGCTCAATGCG CGATGCAGAAATCATCGCCGCAGCAGACGAGCACGGCATGGCCATGGTGATGACGGGCATGCGCCACTTCCGTCACTAA
Upstream 100 bases:
>100_bases AAAAATAGGACCAAGGGACTTTTGGAAAGCGGTGCAGCGCTAAGGCTGTTCTGTTTTCCGAAAGATCCTTGAAACTAAAA TAACTGGACCCTGTACCCAA
Downstream 100 bases:
>100_bases TCGCCACTAAGCAGCCAGCACTCAATCAGAACTGGCTGCTTTTTTGTTTTACCACTCTTTGTTTTACCGCACTCTGGTTT CGACCACAGTGTGCCTACAC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MTAANNARPIRRALLSVSDKTGILEFAKALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHG GILARRGLDESVMADNNINAIDLVAVNLYPFAETVAKAGCTLEDAIENIDIGGPTMVRAAAKNHKDVTIVVNAADYSRVL AEMTANNGSTTHATRFDLAIAAFEHTAGYDGMIANYFGTMVPAHSTDECFADSKFPRTFNTQLVKKQDLRYGENSHQAAA FYVDTKIDEASVATAIQLQGKALSYNNIADTDAALECVKEFLEPACVIVKHANPCGVALGKDLLDAYNRAYQTDPTSAFG GIIAFNGELDAATASAIVERQFVEVIIAPSVSQAARDVVAKKTNVRLLECGQWNTKTQTLDFKRVNGGLLVQDRDQGMVG LEDIKVVSKRQPTASELKDLMFCWKVAKFVKSNAIVYAKDGMTIGVGAGQMSRVYSAKIAGIKAADEGLEVVNSVMASDA FFPFRDGIDAAAAAGISCIIQPGGSMRDAEIIAAADEHGMAMVMTGMRHFRH
Sequences:
>Translated_532_residues MTAANNARPIRRALLSVSDKTGILEFAKALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHG GILARRGLDESVMADNNINAIDLVAVNLYPFAETVAKAGCTLEDAIENIDIGGPTMVRAAAKNHKDVTIVVNAADYSRVL AEMTANNGSTTHATRFDLAIAAFEHTAGYDGMIANYFGTMVPAHSTDECFADSKFPRTFNTQLVKKQDLRYGENSHQAAA FYVDTKIDEASVATAIQLQGKALSYNNIADTDAALECVKEFLEPACVIVKHANPCGVALGKDLLDAYNRAYQTDPTSAFG GIIAFNGELDAATASAIVERQFVEVIIAPSVSQAARDVVAKKTNVRLLECGQWNTKTQTLDFKRVNGGLLVQDRDQGMVG LEDIKVVSKRQPTASELKDLMFCWKVAKFVKSNAIVYAKDGMTIGVGAGQMSRVYSAKIAGIKAADEGLEVVNSVMASDA FFPFRDGIDAAAAAGISCIIQPGGSMRDAEIIAAADEHGMAMVMTGMRHFRH >Mature_531_residues TAANNARPIRRALLSVSDKTGILEFAKALHAQGVELLSTGGTARLLADNGVPVIEVSDYTGHPEIMDGRVKTLHPKVHGG ILARRGLDESVMADNNINAIDLVAVNLYPFAETVAKAGCTLEDAIENIDIGGPTMVRAAAKNHKDVTIVVNAADYSRVLA EMTANNGSTTHATRFDLAIAAFEHTAGYDGMIANYFGTMVPAHSTDECFADSKFPRTFNTQLVKKQDLRYGENSHQAAAF YVDTKIDEASVATAIQLQGKALSYNNIADTDAALECVKEFLEPACVIVKHANPCGVALGKDLLDAYNRAYQTDPTSAFGG IIAFNGELDAATASAIVERQFVEVIIAPSVSQAARDVVAKKTNVRLLECGQWNTKTQTLDFKRVNGGLLVQDRDQGMVGL EDIKVVSKRQPTASELKDLMFCWKVAKFVKSNAIVYAKDGMTIGVGAGQMSRVYSAKIAGIKAADEGLEVVNSVMASDAF FPFRDGIDAAAAAGISCIIQPGGSMRDAEIIAAADEHGMAMVMTGMRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=488, Percent_Identity=38.3196721311475, Blast_Score=275, Evalue=1e-73, Organism=Escherichia coli, GI1790439, Length=525, Percent_Identity=74.8571428571429, Blast_Score=830, Evalue=0.0, Organism=Caenorhabditis elegans, GI71985564, Length=510, Percent_Identity=33.7254901960784, Blast_Score=241, Evalue=9e-64, Organism=Caenorhabditis elegans, GI71985574, Length=339, Percent_Identity=27.7286135693215, Blast_Score=86, Evalue=7e-17, Organism=Caenorhabditis elegans, GI71985556, Length=130, Percent_Identity=33.8461538461538, Blast_Score=76, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6323056, Length=612, Percent_Identity=33.9869281045752, Blast_Score=283, Evalue=6e-77, Organism=Saccharomyces cerevisiae, GI6323768, Length=486, Percent_Identity=36.6255144032922, Blast_Score=268, Evalue=2e-72, Organism=Drosophila melanogaster, GI24649832, Length=612, Percent_Identity=36.1111111111111, Blast_Score=304, Evalue=1e-82,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 56894; Mature: 56763
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAANNARPIRRALLSVSDKTGILEFAKALHAQGVELLSTGGTARLLADNGVPVIEVSDY CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCEEEECCC TGHPEIMDGRVKTLHPKVHGGILARRGLDESVMADNNINAIDLVAVNLYPFAETVAKAGC CCCCCCCCCCEEEECCHHHCCHHHHCCCCHHHHCCCCCCEEEEEEEECCHHHHHHHHCCC TLEDAIENIDIGGPTMVRAAAKNHKDVTIVVNAADYSRVLAEMTANNGSTTHATRFDLAI CHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEHEEEE AAFEHTAGYDGMIANYFGTMVPAHSTDECFADSKFPRTFNTQLVKKQDLRYGENSHQAAA EEEHHCCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEE FYVDTKIDEASVATAIQLQGKALSYNNIADTDAALECVKEFLEPACVIVKHANPCGVALG EEEECCCCCHHHEEEEEECCCEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHH KDLLDAYNRAYQTDPTSAFGGIIAFNGELDAATASAIVERQFVEVIIAPSVSQAARDVVA HHHHHHHHHHCCCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHH KKTNVRLLECGQWNTKTQTLDFKRVNGGLLVQDRDQGMVGLEDIKVVSKRQPTASELKDL HCCCEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHH MFCWKVAKFVKSNAIVYAKDGMTIGVGAGQMSRVYSAKIAGIKAADEGLEVVNSVMASDA HHHHHHHHHHHCCCEEEEECCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC FFPFRDGIDAAAAAGISCIIQPGGSMRDAEIIAAADEHGMAMVMTGMRHFRH CCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure TAANNARPIRRALLSVSDKTGILEFAKALHAQGVELLSTGGTARLLADNGVPVIEVSDY CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCEEEECCC TGHPEIMDGRVKTLHPKVHGGILARRGLDESVMADNNINAIDLVAVNLYPFAETVAKAGC CCCCCCCCCCEEEECCHHHCCHHHHCCCCHHHHCCCCCCEEEEEEEECCHHHHHHHHCCC TLEDAIENIDIGGPTMVRAAAKNHKDVTIVVNAADYSRVLAEMTANNGSTTHATRFDLAI CHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEHEEEE AAFEHTAGYDGMIANYFGTMVPAHSTDECFADSKFPRTFNTQLVKKQDLRYGENSHQAAA EEEHHCCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCEEE FYVDTKIDEASVATAIQLQGKALSYNNIADTDAALECVKEFLEPACVIVKHANPCGVALG EEEECCCCCHHHEEEEEECCCEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHH KDLLDAYNRAYQTDPTSAFGGIIAFNGELDAATASAIVERQFVEVIIAPSVSQAARDVVA HHHHHHHHHHCCCCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHH KKTNVRLLECGQWNTKTQTLDFKRVNGGLLVQDRDQGMVGLEDIKVVSKRQPTASELKDL HCCCEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHH MFCWKVAKFVKSNAIVYAKDGMTIGVGAGQMSRVYSAKIAGIKAADEGLEVVNSVMASDA HHHHHHHHHHHCCCEEEEECCCEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC FFPFRDGIDAAAAAGISCIIQPGGSMRDAEIIAAADEHGMAMVMTGMRHFRH CCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]