Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is bcsP31 [H]

Identifier: 160877128

GI number: 160877128

Start: 4733888

End: 4734844

Strand: Direct

Name: bcsP31 [H]

Synonym: Sbal195_4024

Alternate gene names: 160877128

Gene position: 4733888-4734844 (Clockwise)

Preceding gene: 160877127

Following gene: 160877129

Centisome position: 88.53

GC content: 48.69

Gene sequence:

>957_bases
ATGAAAATCAAAAAACGTTTTGTCGCCGTAGGCGCTGCCGTGACACTCACACTCAGTGCCGCCGCTATGGCCGCCGCCCC
CGCTTTTATTAACATACTCACGGGTGGCACCAGTGGCGTGTATTACCCTATTGGTGTAGCCCTATCGCAACTCTATGGCA
CAGGAATCGAAGGTTCTAAAACCTCAGTTCAAGCGACGAAAGCCTCGGTAGAAAACCTCAATCTACTGCAAGCGGGCCGT
GGCGAATTAGCGCTCGCGCTAGGTGACTCAGTCGCAGCCGCTTACCAAGGTGATATTGATGCGGGCTTTAAAACGCCGTT
GGATAAAATCCGTGTGCTCGCCTCTGCTTACCCTAACTATATTCAAATTGTTGCCAATAAAGAGTCTGGCATTAAAACCT
TGGCCGATTTAAAAGGGAAACGTATCTCTGTCGGCGCACCTAAATCGGGTACCGAGCTCAATGCCAGATCAATTTTTAAG
GCGGCTGGTTTAAGCTACGAAGACATGGGTAAGGTCGAGTTTTTACCTTATGCAGAATCCGTTGAACTCATCAAAAATCG
TCAGTTAGATGCGACCTTGCAGTCGTCTGGTCTCGGTATGGCAGCCATCCGCGATTTAGCGGCGACTATGGCAATCAACT
TTGTTGAAATTCCAGAGGATGTGATTGCTAAGATTAACAACCCTGCCTATCAACACGGCGTGATCCCAGCATCGACCTAT
GAAGGCCAAACCACTGACGTTTCAACCGTTGCCATTCAAAACCTGCTGGTAACGCAAAGCGGCGTGTCGGACGATTTAGC
CTATCAAATGACTAAGATCATGTTCGAGCACTTAGATCGTCTAGGTAACGCGCACTCAGCCGCTAAATCTATTAGCTTAG
AGAAAGCGACGAAAAATCTGCCGATACCGCTACACCCAGGTGCAGAGCGTTATTACAAAGAAGTTGGCGCACTCTAA

Upstream 100 bases:

>100_bases
TTGACCTTTTTCAGGTTTTATGTAGTTATATTCAGCAGGCTAAGGTATTCCAAGCTCGAAAGACCCTACATAACATTATA
AAAAATAAGGATATTTCACA

Downstream 100 bases:

>100_bases
GTTTTGCTGATATCTGTGCACCCTATTCCAAACTAAGCGATCGAGATGCCGTTGAATAACGGCATCTTTTATATTCAAAC
AGCCTCAAACGGTAGAATTC

Product: TRAP transporter solute receptor TAXI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSKTSVQATKASVENLNLLQAGR
GELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNYIQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFK
AAGLSYEDMGKVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY
EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNLPIPLHPGAERYYKEVGAL

Sequences:

>Translated_318_residues
MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSKTSVQATKASVENLNLLQAGR
GELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNYIQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFK
AAGLSYEDMGKVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY
EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNLPIPLHPGAERYYKEVGAL
>Mature_318_residues
MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSKTSVQATKASVENLNLLQAGR
GELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNYIQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFK
AAGLSYEDMGKVEFLPYAESVELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY
EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNLPIPLHPGAERYYKEVGAL

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168
- InterPro:   IPR011852 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 33522; Mature: 33522

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSK
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEHHHHHHHHHHCCCCCCCC
TSVQATKASVENLNLLQAGRGELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNY
CHHHHHHHHHHHCHHEECCCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCE
IQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFKAAGLSYEDMGKVEFLPYAES
EEEEECCCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHCCCEEEECCHHH
VELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY
HHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHCCCCCCCCC
EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNL
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PIPLHPGAERYYKEVGAL
CCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKIKKRFVAVGAAVTLTLSAAAMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIEGSK
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEHHHHHHHHHHCCCCCCCC
TSVQATKASVENLNLLQAGRGELALALGDSVAAAYQGDIDAGFKTPLDKIRVLASAYPNY
CHHHHHHHHHHHCHHEECCCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCE
IQIVANKESGIKTLADLKGKRISVGAPKSGTELNARSIFKAAGLSYEDMGKVEFLPYAES
EEEEECCCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCHHHCCCEEEECCHHH
VELIKNRQLDATLQSSGLGMAAIRDLAATMAINFVEIPEDVIAKINNPAYQHGVIPASTY
HHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHCCCCCCCCC
EGQTTDVSTVAIQNLLVTQSGVSDDLAYQMTKIMFEHLDRLGNAHSAAKSISLEKATKNL
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PIPLHPGAERYYKEVGAL
CCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3133283 [H]