| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yjgR [H]
Identifier: 160877126
GI number: 160877126
Start: 4731592
End: 4733106
Strand: Direct
Name: yjgR [H]
Synonym: Sbal195_4022
Alternate gene names: 160877126
Gene position: 4731592-4733106 (Clockwise)
Preceding gene: 160877121
Following gene: 160877127
Centisome position: 88.49
GC content: 49.64
Gene sequence:
>1515_bases ATGCCCTTGAATACTCTATTTATTGGGAAAGGTGATCAACAGGTTCACTTAAATCTTAAGTATGCTAATCGTCATGGATT AATTGCCGGCGCCACTGGGACAGGCAAAACCGTGTCGCTGATGAGCCTAGCCGAAGGTTTTTCGCGCCAAGGCGTGCCGG TTTTTATCACGGATGTTAAAGGTGATATCTCAGGCCTAGCGATGGCGGGCACCCCAAATGAAAAGCTGTTACAAAGGGCG GCGCAAATTGGCATAGAGGATTATCACAACGAAGCCAACCCTGTGGTGTTATGGGATTTAGCGGGCGTTCAAGGCCATCC ACTGCGTACCACCATCAGCGAAATGGGCCCAACCTTACTCAGCCGAATGTTAGAATTAAATGACACCCAAAGCGGTATCT TAGACATAGTGTTTCAACTGGCAGACGACCAAGGGTTATTATTGCTCGACTTAGATGATCTGCGGGCCATGCTGGCTTTG GTTGCCGAGGAACGCAAAGAAGTCTCCGCCAAATATGGTTTGATCAGCGCCCAATCCCTCGCGGCGATTCAGCGCTCAGT GCTAGGACTTGAGCGCGATGGCGGCAAAGACTTTTTTGGCGAACCCGCGTTACAGCTTGAAGATTTAATGCGCACTAATT TGCAAGGGCGCGGCATCATCAATTTGTTAGCGGCGAATAAACTGATTTTAACGCCACGTTTATATTCAAGTTTTTTACTC TGGCTACTGTCAGAATTATTTGAGAATTTGCCCGAAGTCGGCGATCCCGAAAAACCTAAACTCGTGTTCTTTATTGATGA AGCCCATTTACTCTTTGAAGGTTGCCCACCGAGTTTATTAAAACGCGTCGAACAGATCATGCGCCTTATTCGCTCAAAAG GCGTAGGCGTTTATTTTTGTTCGCAATTTCCTGATGATGTGCCGAGTGAAATTCTCGGGCAATTAGGTAATCGCATTCAA CATGCCCTGCGAGCTTACACGCCAAGAGATCAAAAGGCCGTTAAAACCGCCGCCGAAACCTTTGTGCCTAACCCCAAACT GGTAGTCAGTGAGGTTATTTCCCAGCTCGGCGTGGGCGAGGCCTTAGTGTCTATGCTGGCCGACAAGGGCGTGCCGACTA TGGTCGAGCGCGCACTCATCGCACCGCCGCGTTGTCGAATGGGACCCGCCACGAGTGAGGAATTACACCAAGTCCGCGCC CAAAGCTCGATTGGTGGCAAATACGATCATGCCATCAACCGCGAATCGGCCTACGAACTGCTTAACCAAAGACGTACCGG CGTTGCCACCAGCAACCCCACATCCACAGCAAGTAATACAGCAAATGATGGCCAAACGGGTCAGAAAGCCGAAGAACAAG GTTGGTTCAGTGAACTTATTTTTGGTAATAAACGCCGCCAAGGTTTAGCGGAGACCTTGTCCAAGCAAGCAGCACGCACT GTCGGCAGCCAATTAGGTAAACAAATTTTGCGCGGCATATTAGGCGGGATGTTAGGTAAATCGAGCCGACGCTAG
Upstream 100 bases:
>100_bases CAACACTCAATGGTGAATTTTTATACCCATATACGACGCACTACAGTGGCTTAAATAAGGCTCTGCAATCCATGTGCAGG CGCTAAAGTTAACATAAGGA
Downstream 100 bases:
>100_bases GCATATAGTGCTAAGTGAAGTTTTAGTTCGAGCCCACTCATTCGATCGCACAAAATGACAAACTCTCATGAAATTAGGAG TACAGTGTTATAGATCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MPLNTLFIGKGDQQVHLNLKYANRHGLIAGATGTGKTVSLMSLAEGFSRQGVPVFITDVKGDISGLAMAGTPNEKLLQRA AQIGIEDYHNEANPVVLWDLAGVQGHPLRTTISEMGPTLLSRMLELNDTQSGILDIVFQLADDQGLLLLDLDDLRAMLAL VAEERKEVSAKYGLISAQSLAAIQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPRLYSSFLL WLLSELFENLPEVGDPEKPKLVFFIDEAHLLFEGCPPSLLKRVEQIMRLIRSKGVGVYFCSQFPDDVPSEILGQLGNRIQ HALRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLGVGEALVSMLADKGVPTMVERALIAPPRCRMGPATSEELHQVRA QSSIGGKYDHAINRESAYELLNQRRTGVATSNPTSTASNTANDGQTGQKAEEQGWFSELIFGNKRRQGLAETLSKQAART VGSQLGKQILRGILGGMLGKSSRR
Sequences:
>Translated_504_residues MPLNTLFIGKGDQQVHLNLKYANRHGLIAGATGTGKTVSLMSLAEGFSRQGVPVFITDVKGDISGLAMAGTPNEKLLQRA AQIGIEDYHNEANPVVLWDLAGVQGHPLRTTISEMGPTLLSRMLELNDTQSGILDIVFQLADDQGLLLLDLDDLRAMLAL VAEERKEVSAKYGLISAQSLAAIQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPRLYSSFLL WLLSELFENLPEVGDPEKPKLVFFIDEAHLLFEGCPPSLLKRVEQIMRLIRSKGVGVYFCSQFPDDVPSEILGQLGNRIQ HALRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLGVGEALVSMLADKGVPTMVERALIAPPRCRMGPATSEELHQVRA QSSIGGKYDHAINRESAYELLNQRRTGVATSNPTSTASNTANDGQTGQKAEEQGWFSELIFGNKRRQGLAETLSKQAART VGSQLGKQILRGILGGMLGKSSRR >Mature_503_residues PLNTLFIGKGDQQVHLNLKYANRHGLIAGATGTGKTVSLMSLAEGFSRQGVPVFITDVKGDISGLAMAGTPNEKLLQRAA QIGIEDYHNEANPVVLWDLAGVQGHPLRTTISEMGPTLLSRMLELNDTQSGILDIVFQLADDQGLLLLDLDDLRAMLALV AEERKEVSAKYGLISAQSLAAIQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPRLYSSFLLW LLSELFENLPEVGDPEKPKLVFFIDEAHLLFEGCPPSLLKRVEQIMRLIRSKGVGVYFCSQFPDDVPSEILGQLGNRIQH ALRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLGVGEALVSMLADKGVPTMVERALIAPPRCRMGPATSEELHQVRAQ SSIGGKYDHAINRESAYELLNQRRTGVATSNPTSTASNTANDGQTGQKAEEQGWFSELIFGNKRRQGLAETLSKQAARTV GSQLGKQILRGILGGMLGKSSRR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=500, Percent_Identity=51.4, Blast_Score=492, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 54867; Mature: 54736
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNTLFIGKGDQQVHLNLKYANRHGLIAGATGTGKTVSLMSLAEGFSRQGVPVFITDVK CCCCEEEEECCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECC GDISGLAMAGTPNEKLLQRAAQIGIEDYHNEANPVVLWDLAGVQGHPLRTTISEMGPTLL CCCCCEEECCCCCHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHCHHHH SRMLELNDTQSGILDIVFQLADDQGLLLLDLDDLRAMLALVAEERKEVSAKYGLISAQSL HHHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AAIQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPRLYSSFLL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEHHHCCCEEECHHHHHHHHH WLLSELFENLPEVGDPEKPKLVFFIDEAHLLFEGCPPSLLKRVEQIMRLIRSKGVGVYFC HHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEC SQFPDDVPSEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLGVGE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHH ALVSMLADKGVPTMVERALIAPPRCRMGPATSEELHQVRAQSSIGGKYDHAINRESAYEL HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHH LNQRRTGVATSNPTSTASNTANDGQTGQKAEEQGWFSELIFGNKRRQGLAETLSKQAART HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VGSQLGKQILRGILGGMLGKSSRR HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PLNTLFIGKGDQQVHLNLKYANRHGLIAGATGTGKTVSLMSLAEGFSRQGVPVFITDVK CCCEEEEECCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECC GDISGLAMAGTPNEKLLQRAAQIGIEDYHNEANPVVLWDLAGVQGHPLRTTISEMGPTLL CCCCCEEECCCCCHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHCHHHH SRMLELNDTQSGILDIVFQLADDQGLLLLDLDDLRAMLALVAEERKEVSAKYGLISAQSL HHHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH AAIQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPRLYSSFLL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEHHHCCCEEECHHHHHHHHH WLLSELFENLPEVGDPEKPKLVFFIDEAHLLFEGCPPSLLKRVEQIMRLIRSKGVGVYFC HHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEC SQFPDDVPSEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLGVGE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHH ALVSMLADKGVPTMVERALIAPPRCRMGPATSEELHQVRAQSSIGGKYDHAINRESAYEL HHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHH LNQRRTGVATSNPTSTASNTANDGQTGQKAEEQGWFSELIFGNKRRQGLAETLSKQAART HHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VGSQLGKQILRGILGGMLGKSSRR HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]