| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877121
Identifier: 160877121
GI number: 160877121
Start: 4727933
End: 4729132
Strand: Direct
Name: 160877121
Synonym: Sbal195_4017
Alternate gene names: NA
Gene position: 4727933-4729132 (Clockwise)
Preceding gene: 160877117
Following gene: 160877126
Centisome position: 88.42
GC content: 45.75
Gene sequence:
>1200_bases ATGTCCCATTCAGCACTTAATTCTTTTGATGATTTTTACCAGCTTTTGGCTGACAGCTTGGCGAAGAATAGTCTGATCAA ACTATTGTTGAGTAAGTACCGAGGGGCAGATAAAAGCCTGCAGCGCATTACGATTCGGCCGATCAGTTTGCAGAATGAAC CTATGCTGTCGTTTGTGTATCAACACCAGACGAATCACATCACTAAAAACCTGAGTTATGACGAAGGCTTAGCCAGCATA AAACTGTTACTCGGTAGCGATTTTAAGAGCGCCCACTTAGCTACGGCAGAGGCAGAAGTTCAGCTTGAGATCAGCAAAAA AGGCAAAGTCCAAATCAGCACACATAACGTTAAACAAACCGTCGCGGCGCCGTTAGAACATGACCGCGAGAAAAAGCGTT TTGTGGATATCGAACGTCCTTTCTTGACTCAGCTCGGGGTGACGGACAGCCAACATAATCTTATCCCTGCGATGTCGCGT AAATGGAAACAAATCAATAAATTTATTGAAGTTTTCAGCCAAGCACTCGAAGCCTCACCCCACAAGAATGATCAACCGAT CAATGTAGTCGATTTTGGTTCAGGCAAAGGCTATCTCACCTTTGCAATCCATGATTACCTGCGCCACAGCCTTCACAATG ATGCGCAAGTGACTGGGGTGGAATTACGCCAAGCCTTGGCCGATTTATGTAATGAAACGGCGGCTACGCTGGATCATCAA GGATTGTCGTTTGTCTGCGGCGATGTGAGAACCCATGCGCCTAAGCAAACCGATGTGATGATCGCCCTGCACGCCTGCGA TATCGCCACTGACTATGCGATTCATTATGGCATTCGCGCCAATGCCGACATCATCATGTGTTCGCCTTGCTGCCATAAAC AAATTCGCCCACAGATGCACAGTCCAGAATTGTTTAAACCTATGCTGCAATATGGAGTGCACATGGGCCAACAGGCTGAA ATGGTGACGGATTCATTACGTGCGCTATTTTTGGAAGCCAACGGTTATGCGACTAAGGTGTTTGAATTTATCAGCCTAGA ACATACCAATAAAAATAAGATGATTTTGGCCGTTAAAAAGCCACAACATAATCAGAAAGACAGTGCCGCAATCCTCGCGC AAATTGCTGACATTAAAGCCTATTACGGGATCAAGGAACATTGCTTAGAAACCTTGCTCTCGCAAACCCAAGCCGATTAA
Upstream 100 bases:
>100_bases TGCCCCAAACCCCCTTCTCGGTGAGAATAACTTTAGGTAGCGGCGGATCGCGGTTAGAATACTCACCCTGTTTTTCTTGG TTACTTTTTCGGAAACAATA
Downstream 100 bases:
>100_bases CGGCCGGCGGTTTGCTGGTAAAGCATTAGAACTTTGCACTCATCACAACGCCGTTGAAATTGAGGCAATCTTTGATTCTT TGCTGCTGAACCGCGCTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSHSALNSFDDFYQLLADSLAKNSLIKLLLSKYRGADKSLQRITIRPISLQNEPMLSFVYQHQTNHITKNLSYDEGLASI KLLLGSDFKSAHLATAEAEVQLEISKKGKVQISTHNVKQTVAAPLEHDREKKRFVDIERPFLTQLGVTDSQHNLIPAMSR KWKQINKFIEVFSQALEASPHKNDQPINVVDFGSGKGYLTFAIHDYLRHSLHNDAQVTGVELRQALADLCNETAATLDHQ GLSFVCGDVRTHAPKQTDVMIALHACDIATDYAIHYGIRANADIIMCSPCCHKQIRPQMHSPELFKPMLQYGVHMGQQAE MVTDSLRALFLEANGYATKVFEFISLEHTNKNKMILAVKKPQHNQKDSAAILAQIADIKAYYGIKEHCLETLLSQTQAD
Sequences:
>Translated_399_residues MSHSALNSFDDFYQLLADSLAKNSLIKLLLSKYRGADKSLQRITIRPISLQNEPMLSFVYQHQTNHITKNLSYDEGLASI KLLLGSDFKSAHLATAEAEVQLEISKKGKVQISTHNVKQTVAAPLEHDREKKRFVDIERPFLTQLGVTDSQHNLIPAMSR KWKQINKFIEVFSQALEASPHKNDQPINVVDFGSGKGYLTFAIHDYLRHSLHNDAQVTGVELRQALADLCNETAATLDHQ GLSFVCGDVRTHAPKQTDVMIALHACDIATDYAIHYGIRANADIIMCSPCCHKQIRPQMHSPELFKPMLQYGVHMGQQAE MVTDSLRALFLEANGYATKVFEFISLEHTNKNKMILAVKKPQHNQKDSAAILAQIADIKAYYGIKEHCLETLLSQTQAD >Mature_398_residues SHSALNSFDDFYQLLADSLAKNSLIKLLLSKYRGADKSLQRITIRPISLQNEPMLSFVYQHQTNHITKNLSYDEGLASIK LLLGSDFKSAHLATAEAEVQLEISKKGKVQISTHNVKQTVAAPLEHDREKKRFVDIERPFLTQLGVTDSQHNLIPAMSRK WKQINKFIEVFSQALEASPHKNDQPINVVDFGSGKGYLTFAIHDYLRHSLHNDAQVTGVELRQALADLCNETAATLDHQG LSFVCGDVRTHAPKQTDVMIALHACDIATDYAIHYGIRANADIIMCSPCCHKQIRPQMHSPELFKPMLQYGVHMGQQAEM VTDSLRALFLEANGYATKVFEFISLEHTNKNKMILAVKKPQHNQKDSAAILAQIADIKAYYGIKEHCLETLLSQTQAD
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44788; Mature: 44657
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSALNSFDDFYQLLADSLAKNSLIKLLLSKYRGADKSLQRITIRPISLQNEPMLSFVY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCHHHHHHH QHQTNHITKNLSYDEGLASIKLLLGSDFKSAHLATAEAEVQLEISKKGKVQISTHNVKQT HHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHEEEECEEEEEEECCCCEEEEEECCHHHH VAAPLEHDREKKRFVDIERPFLTQLGVTDSQHNLIPAMSRKWKQINKFIEVFSQALEASP HHHHHHHCHHHHHEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC HKNDQPINVVDFGSGKGYLTFAIHDYLRHSLHNDAQVTGVELRQALADLCNETAATLDHQ CCCCCCEEEEEECCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GLSFVCGDVRTHAPKQTDVMIALHACDIATDYAIHYGIRANADIIMCSPCCHKQIRPQMH CCCEEECCHHHCCCCCCCEEEEEEEHHHHHHHHEEECEECCCCEEEECHHHHHHCCCCCC SPELFKPMLQYGVHMGQQAEMVTDSLRALFLEANGYATKVFEFISLEHTNKNKMILAVKK CCHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHEECCCCCEEEEEEC PQHNQKDSAAILAQIADIKAYYGIKEHCLETLLSQTQAD CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SHSALNSFDDFYQLLADSLAKNSLIKLLLSKYRGADKSLQRITIRPISLQNEPMLSFVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCHHHHHHH QHQTNHITKNLSYDEGLASIKLLLGSDFKSAHLATAEAEVQLEISKKGKVQISTHNVKQT HHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHEEEECEEEEEEECCCCEEEEEECCHHHH VAAPLEHDREKKRFVDIERPFLTQLGVTDSQHNLIPAMSRKWKQINKFIEVFSQALEASP HHHHHHHCHHHHHEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC HKNDQPINVVDFGSGKGYLTFAIHDYLRHSLHNDAQVTGVELRQALADLCNETAATLDHQ CCCCCCEEEEEECCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GLSFVCGDVRTHAPKQTDVMIALHACDIATDYAIHYGIRANADIIMCSPCCHKQIRPQMH CCCEEECCHHHCCCCCCCEEEEEEEHHHHHHHHEEECEECCCCEEEECHHHHHHCCCCCC SPELFKPMLQYGVHMGQQAEMVTDSLRALFLEANGYATKVFEFISLEHTNKNKMILAVKK CCHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHEECCCCCEEEEEEC PQHNQKDSAAILAQIADIKAYYGIKEHCLETLLSQTQAD CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA