| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is nudH [C]
Identifier: 160877122
GI number: 160877122
Start: 4729158
End: 4729622
Strand: Reverse
Name: nudH [C]
Synonym: Sbal195_4018
Alternate gene names: 160877122
Gene position: 4729622-4729158 (Counterclockwise)
Preceding gene: 160877123
Following gene: 160877120
Centisome position: 88.45
GC content: 50.11
Gene sequence:
>465_bases GTGGCCTTTAACGATACCTTTAGATTGAGCAGCCACGCGGTTATTACTAATGCGCAGGGGCAAGTGCTGTTGCTTAAGGC TAATTACGGTAATTTTGCTTGGGGCTTGCCCGGCGGCGCACTCGAGCCTGGTGAAACGATTCACGAGGCCTTGGTGCGCG AATGCCAAGAGGAATTGGGGTTAAGTGTGCGGGTTAACTATTTGAGCGGCGTGTATTATCACAGCGCCTATCAATCCCAA GCCTTTATCTTTCGTTGTGAACTGGTGTTGCCTGAGTTGCCTGAGTTGCCTGAGGGACATGAGGTGGCCAAAGATGGTGC AGAAAACGAGCCACTGCCAATCCACTTAAGCCACGAACATTCAGAGTTTGCCTTCCACGATATCGACACCCTTAGCGCGG TTCAGCAGCAAAGAATCAAAGATTGCCTCAATTTCAACGGCGTTGTGATGAGTGCAAAGTTCTAA
Upstream 100 bases:
>100_bases GTTTGATTCGGGTAATCTCGCCAGTTGTAATACCTTTGCGGCGAAGTGATTTTGTTTGATATCTCAAATACGTACCGAAC ATAAATGCAAGGATAACTGA
Downstream 100 bases:
>100_bases TGCTTTACCAGCAAACCGCCGGCCGTTAATCGGCTTGGGTTTGCGAGAGCAAGGTTTCTAAGCAATGTTCCTTGATCCCG TAATAGGCTTTAATGTCAGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT-Like Protein
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MAFNDTFRLSSHAVITNAQGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELGLSVRVNYLSGVYYHSAYQSQ AFIFRCELVLPELPELPEGHEVAKDGAENEPLPIHLSHEHSEFAFHDIDTLSAVQQQRIKDCLNFNGVVMSAKF
Sequences:
>Translated_154_residues MAFNDTFRLSSHAVITNAQGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELGLSVRVNYLSGVYYHSAYQSQ AFIFRCELVLPELPELPEGHEVAKDGAENEPLPIHLSHEHSEFAFHDIDTLSAVQQQRIKDCLNFNGVVMSAKF >Mature_153_residues AFNDTFRLSSHAVITNAQGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELGLSVRVNYLSGVYYHSAYQSQA FIFRCELVLPELPELPEGHEVAKDGAENEPLPIHLSHEHSEFAFHDIDTLSAVQQQRIKDCLNFNGVVMSAKF
Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 17141; Mature: 17010
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNDTFRLSSHAVITNAQGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELG CCCCCCEEECCCEEEECCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCC LSVRVNYLSGVYYHSAYQSQAFIFRCELVLPELPELPEGHEVAKDGAENEPLPIHLSHEH CEEEEEEHHCEEEHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEECCCC SEFAFHDIDTLSAVQQQRIKDCLNFNGVVMSAKF CCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure AFNDTFRLSSHAVITNAQGQVLLLKANYGNFAWGLPGGALEPGETIHEALVRECQEELG CCCCCEEECCCEEEECCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCC LSVRVNYLSGVYYHSAYQSQAFIFRCELVLPELPELPEGHEVAKDGAENEPLPIHLSHEH CEEEEEEHHCEEEHHCCCCCEEEEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEECCCC SEFAFHDIDTLSAVQQQRIKDCLNFNGVVMSAKF CCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA