| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877079
Identifier: 160877079
GI number: 160877079
Start: 4681418
End: 4682905
Strand: Reverse
Name: 160877079
Synonym: Sbal195_3975
Alternate gene names: NA
Gene position: 4682905-4681418 (Counterclockwise)
Preceding gene: 160877080
Following gene: 160877078
Centisome position: 87.58
GC content: 52.42
Gene sequence:
>1488_bases ATGAACAAAACGACTCTCGCCCTTACCTTGGCTTGCCTGTTTCGATCGGGCTTGCTGAGCTGCGGATTAGTATTGGCTGC CGGATTGCTAGCCTTTGCCCTCGCGGCAGAAAATGACACTCTTGAAGTCTTCCTTAAAACCAAAGCCCTTGAAACCAATC CCTTGGAAACCAATGCGCTTGAAACCAAAGCCTCAGAAGCCGAGGTATTTAAAGCTCAATCACTGGGCTTACCCGCTAAA GAAAACGACGCGCCATATGTCGCCTTTGGCCAATGGTTGCCCGCGTTACTCACACAGTTCAATCAGTTACCTGAAGTGCA AGCCCAGCTTACACGGCAGCAACAAGCAGAGCTTGCCATTCAGGCGGCGGATCGCGCCGTGTATAACCCTGAACTTGGGC TTAACTATCAAAATGCCGACACAGATTCCTACAGCTTAGGCCTGAGTCAAACCTTAGATTGGGGAGATAAGCGCGGCGTG GCGACAAAACGTGCCGAGCTTGAAGCCCAAATCCTGTTCGCTGACATAGGTTTAGAGCGTAACCAAATGTTGGCCGAACG CTTACTGGCGCTGGCAGAACAGGCGCAAAGTCGTAAGGCGCTGACTTTTGCCGAGCAGCAACTCAGGTTTACTAAGGCGC AGCTCGGCATTGCCAAGCAGCGGTTGGCGGCGGGGGATTTGTCTAACGTTGAGTTGCAATTGATGCAACTCGAGTTAGCA ACCAATACCGCCGATTATGCCTTAGCTGAGCAGGCAGCTTTAGTGGCTGACGGCAAAGTGATTGAGTTGCTTGGGGATAA TAATCTCGCCTTTAGTGAGTTCATCAAGGAGATCCATGTCTTCGTGACTCAGGCTAAGCAAGCGCCAGCGCCCGAGTTGG GCACCTCCAAATCAACTTTGCCAGCACTGGCGAGCGCTTACCAACAAGTGTTGTTGGCGCGAGTCAATGCCATGCAAGTC AAGGCCGATAAGTCAGCGGACCCGACCATTAGCCTAGGCGCAGAAAAGGAGGGCACGGACAATAAGCTCGGTGTCGGTGT ATCGATTCCTCTGCAAGTTCGCAATAACTACAGTGAGTTACAAGCAGTGGCCGATAAGGGCATCGCGATCGCCGAGCAAG GCTATCTTGCCCGTGAGCGAGTACTTACCGCCAAGCAGAAACACGTCCTCTACGCGTTACCGCGTTTACTTGAGCGTTAC CAAGACTGGCGCGAGTTAGTACAAGTGTCCGGTGCCAAAGCCGCTAAATCCTTAAGCCAACAATGGCAAGCGGGCGATGT GAGTACCAGCGAGTACTTGCAGAGTCGCCGTCAGTTGGCCGCCAGTTATTTGGTGGGCTTGAATCTAGAAACGGCCATTT ATCAGAGCTGGTTAACGTGGATGGGCGAAAGCGGTCAGCTTATGCCCTTTTTGAATGGTACGGCTGAACAGATCTGCCAA GCACCTTCACACATGCCAAATGCCGCCGTGCGCACAGTAAACCAATGA
Upstream 100 bases:
>100_bases TTGCTTTGTATTGAGCTATTTCAAATGAAGCTCAAATCTAGCTGTCTCACATTGGGCGCAAAAGTCAGCCGATCCACATT CGATATTGTTAGGATTTGCG
Downstream 100 bases:
>100_bases GGTAACCCAAATGAATTCACATAATCACTTTAACGCTACTAAGTCTTATCCAGTTGCAATGTCAGACACTGCTGCACCTG ACATCATTACGTCTCAAATC
Product: outer membrane efflux protein
Products: NA
Alternate protein names: Outer Membrane Efflux Protein; Efflux Family Outer Membrane Protein; Outer Membrane Protein Probably Efflux Family; Outer Membrane Protein; Cation Efflux System Protein; Lipoprotein
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNALETKASEAEVFKAQSLGLPAK ENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAIQAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGV ATKRAELEAQILFADIGLERNQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTLPALASAYQQVLLARVNAMQV KADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSELQAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERY QDWRELVQVSGAKAAKSLSQQWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ APSHMPNAAVRTVNQ
Sequences:
>Translated_495_residues MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNALETKASEAEVFKAQSLGLPAK ENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAIQAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGV ATKRAELEAQILFADIGLERNQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTLPALASAYQQVLLARVNAMQV KADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSELQAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERY QDWRELVQVSGAKAAKSLSQQWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ APSHMPNAAVRTVNQ >Mature_495_residues MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNALETKASEAEVFKAQSLGLPAK ENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAIQAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGV ATKRAELEAQILFADIGLERNQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTLPALASAYQQVLLARVNAMQV KADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSELQAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERY QDWRELVQVSGAKAAKSLSQQWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ APSHMPNAAVRTVNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53893; Mature: 53893
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHH ETKASEAEVFKAQSLGLPAKENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAI HCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGVATKRAELEAQILFADIGLER HHHHHHEECCCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCHHHHHHHEEEEEEECCCCH NQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHH TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTL CCCHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH PALASAYQQVLLARVNAMQVKADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSEL HHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCCCCCCCEECEEEEEEHCCCCHHHH QAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERYQDWRELVQVSGAKAAKSLSQ HHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH QWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ HHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHC APSHMPNAAVRTVNQ CCCCCCCHHHHCCCC >Mature Secondary Structure MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHH ETKASEAEVFKAQSLGLPAKENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAI HCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGVATKRAELEAQILFADIGLER HHHHHHEECCCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCHHHHHHHEEEEEEECCCCH NQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHH TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTL CCCHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH PALASAYQQVLLARVNAMQVKADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSEL HHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCCCCCCCEECEEEEEEHCCCCHHHH QAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERYQDWRELVQVSGAKAAKSLSQ HHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH QWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ HHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHC APSHMPNAAVRTVNQ CCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA