Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160877079

Identifier: 160877079

GI number: 160877079

Start: 4681418

End: 4682905

Strand: Reverse

Name: 160877079

Synonym: Sbal195_3975

Alternate gene names: NA

Gene position: 4682905-4681418 (Counterclockwise)

Preceding gene: 160877080

Following gene: 160877078

Centisome position: 87.58

GC content: 52.42

Gene sequence:

>1488_bases
ATGAACAAAACGACTCTCGCCCTTACCTTGGCTTGCCTGTTTCGATCGGGCTTGCTGAGCTGCGGATTAGTATTGGCTGC
CGGATTGCTAGCCTTTGCCCTCGCGGCAGAAAATGACACTCTTGAAGTCTTCCTTAAAACCAAAGCCCTTGAAACCAATC
CCTTGGAAACCAATGCGCTTGAAACCAAAGCCTCAGAAGCCGAGGTATTTAAAGCTCAATCACTGGGCTTACCCGCTAAA
GAAAACGACGCGCCATATGTCGCCTTTGGCCAATGGTTGCCCGCGTTACTCACACAGTTCAATCAGTTACCTGAAGTGCA
AGCCCAGCTTACACGGCAGCAACAAGCAGAGCTTGCCATTCAGGCGGCGGATCGCGCCGTGTATAACCCTGAACTTGGGC
TTAACTATCAAAATGCCGACACAGATTCCTACAGCTTAGGCCTGAGTCAAACCTTAGATTGGGGAGATAAGCGCGGCGTG
GCGACAAAACGTGCCGAGCTTGAAGCCCAAATCCTGTTCGCTGACATAGGTTTAGAGCGTAACCAAATGTTGGCCGAACG
CTTACTGGCGCTGGCAGAACAGGCGCAAAGTCGTAAGGCGCTGACTTTTGCCGAGCAGCAACTCAGGTTTACTAAGGCGC
AGCTCGGCATTGCCAAGCAGCGGTTGGCGGCGGGGGATTTGTCTAACGTTGAGTTGCAATTGATGCAACTCGAGTTAGCA
ACCAATACCGCCGATTATGCCTTAGCTGAGCAGGCAGCTTTAGTGGCTGACGGCAAAGTGATTGAGTTGCTTGGGGATAA
TAATCTCGCCTTTAGTGAGTTCATCAAGGAGATCCATGTCTTCGTGACTCAGGCTAAGCAAGCGCCAGCGCCCGAGTTGG
GCACCTCCAAATCAACTTTGCCAGCACTGGCGAGCGCTTACCAACAAGTGTTGTTGGCGCGAGTCAATGCCATGCAAGTC
AAGGCCGATAAGTCAGCGGACCCGACCATTAGCCTAGGCGCAGAAAAGGAGGGCACGGACAATAAGCTCGGTGTCGGTGT
ATCGATTCCTCTGCAAGTTCGCAATAACTACAGTGAGTTACAAGCAGTGGCCGATAAGGGCATCGCGATCGCCGAGCAAG
GCTATCTTGCCCGTGAGCGAGTACTTACCGCCAAGCAGAAACACGTCCTCTACGCGTTACCGCGTTTACTTGAGCGTTAC
CAAGACTGGCGCGAGTTAGTACAAGTGTCCGGTGCCAAAGCCGCTAAATCCTTAAGCCAACAATGGCAAGCGGGCGATGT
GAGTACCAGCGAGTACTTGCAGAGTCGCCGTCAGTTGGCCGCCAGTTATTTGGTGGGCTTGAATCTAGAAACGGCCATTT
ATCAGAGCTGGTTAACGTGGATGGGCGAAAGCGGTCAGCTTATGCCCTTTTTGAATGGTACGGCTGAACAGATCTGCCAA
GCACCTTCACACATGCCAAATGCCGCCGTGCGCACAGTAAACCAATGA

Upstream 100 bases:

>100_bases
TTGCTTTGTATTGAGCTATTTCAAATGAAGCTCAAATCTAGCTGTCTCACATTGGGCGCAAAAGTCAGCCGATCCACATT
CGATATTGTTAGGATTTGCG

Downstream 100 bases:

>100_bases
GGTAACCCAAATGAATTCACATAATCACTTTAACGCTACTAAGTCTTATCCAGTTGCAATGTCAGACACTGCTGCACCTG
ACATCATTACGTCTCAAATC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Efflux Protein; Efflux Family Outer Membrane Protein; Outer Membrane Protein Probably Efflux Family; Outer Membrane Protein; Cation Efflux System Protein; Lipoprotein

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNALETKASEAEVFKAQSLGLPAK
ENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAIQAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGV
ATKRAELEAQILFADIGLERNQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA
TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTLPALASAYQQVLLARVNAMQV
KADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSELQAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERY
QDWRELVQVSGAKAAKSLSQQWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ
APSHMPNAAVRTVNQ

Sequences:

>Translated_495_residues
MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNALETKASEAEVFKAQSLGLPAK
ENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAIQAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGV
ATKRAELEAQILFADIGLERNQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA
TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTLPALASAYQQVLLARVNAMQV
KADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSELQAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERY
QDWRELVQVSGAKAAKSLSQQWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ
APSHMPNAAVRTVNQ
>Mature_495_residues
MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNALETKASEAEVFKAQSLGLPAK
ENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAIQAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGV
ATKRAELEAQILFADIGLERNQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA
TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTLPALASAYQQVLLARVNAMQV
KADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSELQAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERY
QDWRELVQVSGAKAAKSLSQQWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ
APSHMPNAAVRTVNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53893; Mature: 53893

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHH
ETKASEAEVFKAQSLGLPAKENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAI
HCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGVATKRAELEAQILFADIGLER
HHHHHHEECCCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCHHHHHHHEEEEEEECCCCH
NQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHH
TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTL
CCCHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
PALASAYQQVLLARVNAMQVKADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSEL
HHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCCCCCCCEECEEEEEEHCCCCHHHH
QAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERYQDWRELVQVSGAKAAKSLSQ
HHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ
HHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHC
APSHMPNAAVRTVNQ
CCCCCCCHHHHCCCC
>Mature Secondary Structure
MNKTTLALTLACLFRSGLLSCGLVLAAGLLAFALAAENDTLEVFLKTKALETNPLETNAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHH
ETKASEAEVFKAQSLGLPAKENDAPYVAFGQWLPALLTQFNQLPEVQAQLTRQQQAELAI
HCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QAADRAVYNPELGLNYQNADTDSYSLGLSQTLDWGDKRGVATKRAELEAQILFADIGLER
HHHHHHEECCCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCHHHHHHHEEEEEEECCCCH
NQMLAERLLALAEQAQSRKALTFAEQQLRFTKAQLGIAKQRLAAGDLSNVELQLMQLELA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHH
TNTADYALAEQAALVADGKVIELLGDNNLAFSEFIKEIHVFVTQAKQAPAPELGTSKSTL
CCCHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
PALASAYQQVLLARVNAMQVKADKSADPTISLGAEKEGTDNKLGVGVSIPLQVRNNYSEL
HHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCCCCCCCEECEEEEEEHCCCCHHHH
QAVADKGIAIAEQGYLARERVLTAKQKHVLYALPRLLERYQDWRELVQVSGAKAAKSLSQ
HHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QWQAGDVSTSEYLQSRRQLAASYLVGLNLETAIYQSWLTWMGESGQLMPFLNGTAEQICQ
HHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHC
APSHMPNAAVRTVNQ
CCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA