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The map label for this gene is ydhJ [C]

Identifier: 160877078

GI number: 160877078

Start: 4680085

End: 4681407

Strand: Reverse

Name: ydhJ [C]

Synonym: Sbal195_3974

Alternate gene names: 160877078

Gene position: 4681407-4680085 (Counterclockwise)

Preceding gene: 160877079

Following gene: 160877077

Centisome position: 87.55

GC content: 54.35

Gene sequence:

>1323_bases
ATGAATTCACATAATCACTTTAACGCTACTAAGTCTTATCCAGTTGCAATGTCAGACACTGCTGCACCTGACATCATTAC
GTCTCAAATCACAGCACCTGAAATCATTGCGCCTCAAATTACAGTACCTGCAAAGCGGCAGTTCACGTTGTCGACACTCG
CCCTCGCATTATGTGTGCTCGGCTCTGCTGCGCTTTTCACCGCCCAACCTTCATGGGCAGGGGACGATCACGGTTCAGCT
ACTCAAACTGAGCAAGCGGATGAACACGGTGCACAGGCGCTTAAGTTGACCCAAGTGCAGCAAGCTTTGGCGGGCATTAG
CTTGTTACCCCTGTCGAGCGATAGCTTGAATATCGCCAATTTGAATCTGGATATCAGGGCGACGGCCACCTTAGTGGTGG
ATCGCGATAGAACTGCCACCCTTGCGCCACAGCTCGATGCGCGCGTGTTGGCGCGTCATGTGGTGCCGGGACAAGAAGTC
AAAAAAGGTGAGCCTTTACTGACCTTGGGCGGCGCAGCCGTTGCGCAGGCACAGGCGGATTACATCAATGCCGCCGCCGA
ATGGAGCCGAGTCAAACGCATGAGCGAAGGCGCCGTGAGTGTCAGCCGCCGTATGCAGGCGCAGGTGGATGCCGAACTTA
AACGGGCGATTTTAGAGGCGATTAAGATGACGCCAACACAAATTCGCGCTCTGGAATCGACGCCCGAAGCCATCGGCAGT
TATCAACTTTTAGCGCCGATTGACGGACGAGTGCAGCAAGATATCGCCATGTTAGGCCAAGTATTTAGTGCGGGCACGCC
GTTAATGCAGCTGACCGACGAGTCTTATTTATGGGTCGAGGCGCAGCTAACGCCTACCCAAACTGCGCATATCACTGTCG
GCAGTGCGGCCTTAGTGCAAGTGGGGGATAAAACGCTGGCGGGCAAGATCATAGGCCGCTCCCATGAGCTCGATAGCGTG
ACGCGCACCGAGCAAGTTCTGGTGAGTATGCCTAATCCTGATCATGTGCTGCATGCGGGGCAATTTGCCGAACTCTACTT
TGCCAATACTGTCGCCAACTCTGCTGATAAGGCTGGTGGAATCGTGCTGCCCGATGCGGCGCTCACCCGCAGCGGCGATG
GCGACTGGCAGATTTTTATTCAAGATGAAGATGGCTTCGAGTCCATTGAGGTAGAAGTGGTGCAGCGTCAGCGCGGCTTG
AGTTTAGTGCGCGGCGCTGAGCTTGAAAAAGCCCAGCAGGCACAGCTTAAGGTTGTGGTGGCTGGCGCATTTTTCTTGGC
GTCCGAGCAGGCGAAAGCAGGCTTTGATATTCATAACCATTAA

Upstream 100 bases:

>100_bases
CTTATGCCCTTTTTGAATGGTACGGCTGAACAGATCTGCCAAGCACCTTCACACATGCCAAATGCCGCCGTGCGCACAGT
AAACCAATGAGGTAACCCAA

Downstream 100 bases:

>100_bases
TGTCGCCACTGAACGCTTGAGGAATTTTCTATGTTGCAAAAAGTGATCGAAGCCGCGATTAAAAATCGGCTGTTAGTGGT
GTTGGCCTTGCTCGCCATGA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Secretion Protein HlyD; Efflux Transporter RND Family MFP Subunit; Cation Efflux Protein; Cation Efflux System Protein; RND Family Transporter Membrane-Fusion Protein; Heavy Metal Resistance Protein Czcb; Membrane-Fusion Protein RND-Like Efflux System Component; Cobalt-Zinc-Cadmium Resistance Membrane-Fusion Protein; Copper/Silver Efflux System Membrane Fusion Protein; Cation Efflux Family Protein

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MNSHNHFNATKSYPVAMSDTAAPDIITSQITAPEIIAPQITVPAKRQFTLSTLALALCVLGSAALFTAQPSWAGDDHGSA
TQTEQADEHGAQALKLTQVQQALAGISLLPLSSDSLNIANLNLDIRATATLVVDRDRTATLAPQLDARVLARHVVPGQEV
KKGEPLLTLGGAAVAQAQADYINAAAEWSRVKRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTPTQIRALESTPEAIGS
YQLLAPIDGRVQQDIAMLGQVFSAGTPLMQLTDESYLWVEAQLTPTQTAHITVGSAALVQVGDKTLAGKIIGRSHELDSV
TRTEQVLVSMPNPDHVLHAGQFAELYFANTVANSADKAGGIVLPDAALTRSGDGDWQIFIQDEDGFESIEVEVVQRQRGL
SLVRGAELEKAQQAQLKVVVAGAFFLASEQAKAGFDIHNH

Sequences:

>Translated_440_residues
MNSHNHFNATKSYPVAMSDTAAPDIITSQITAPEIIAPQITVPAKRQFTLSTLALALCVLGSAALFTAQPSWAGDDHGSA
TQTEQADEHGAQALKLTQVQQALAGISLLPLSSDSLNIANLNLDIRATATLVVDRDRTATLAPQLDARVLARHVVPGQEV
KKGEPLLTLGGAAVAQAQADYINAAAEWSRVKRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTPTQIRALESTPEAIGS
YQLLAPIDGRVQQDIAMLGQVFSAGTPLMQLTDESYLWVEAQLTPTQTAHITVGSAALVQVGDKTLAGKIIGRSHELDSV
TRTEQVLVSMPNPDHVLHAGQFAELYFANTVANSADKAGGIVLPDAALTRSGDGDWQIFIQDEDGFESIEVEVVQRQRGL
SLVRGAELEKAQQAQLKVVVAGAFFLASEQAKAGFDIHNH
>Mature_440_residues
MNSHNHFNATKSYPVAMSDTAAPDIITSQITAPEIIAPQITVPAKRQFTLSTLALALCVLGSAALFTAQPSWAGDDHGSA
TQTEQADEHGAQALKLTQVQQALAGISLLPLSSDSLNIANLNLDIRATATLVVDRDRTATLAPQLDARVLARHVVPGQEV
KKGEPLLTLGGAAVAQAQADYINAAAEWSRVKRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTPTQIRALESTPEAIGS
YQLLAPIDGRVQQDIAMLGQVFSAGTPLMQLTDESYLWVEAQLTPTQTAHITVGSAALVQVGDKTLAGKIIGRSHELDSV
TRTEQVLVSMPNPDHVLHAGQFAELYFANTVANSADKAGGIVLPDAALTRSGDGDWQIFIQDEDGFESIEVEVVQRQRGL
SLVRGAELEKAQQAQLKVVVAGAFFLASEQAKAGFDIHNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46911; Mature: 46911

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSHNHFNATKSYPVAMSDTAAPDIITSQITAPEIIAPQITVPAKRQFTLSTLALALCVL
CCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GSAALFTAQPSWAGDDHGSATQTEQADEHGAQALKLTQVQQALAGISLLPLSSDSLNIAN
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEE
LNLDIRATATLVVDRDRTATLAPQLDARVLARHVVPGQEVKKGEPLLTLGGAAVAQAQAD
EEEEEEEEEEEEEECCCCEEECCCHHHHHHHHHCCCCCHHCCCCCEEEECCHHHHHHHHH
YINAAAEWSRVKRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTPTQIRALESTPEAIGS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCC
YQLLAPIDGRVQQDIAMLGQVFSAGTPLMQLTDESYLWVEAQLTPTQTAHITVGSAALVQ
EEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCEEEEEECCEEEEE
VGDKTLAGKIIGRSHELDSVTRTEQVLVSMPNPDHVLHAGQFAELYFANTVANSADKAGG
ECCCHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCEEECCCHHHHEEHHHHHCCCCCCCC
IVLPDAALTRSGDGDWQIFIQDEDGFESIEVEVVQRQRGLSLVRGAELEKAQQAQLKVVV
EEECCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHCEEEEEE
AGAFFLASEQAKAGFDIHNH
EEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNSHNHFNATKSYPVAMSDTAAPDIITSQITAPEIIAPQITVPAKRQFTLSTLALALCVL
CCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GSAALFTAQPSWAGDDHGSATQTEQADEHGAQALKLTQVQQALAGISLLPLSSDSLNIAN
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEE
LNLDIRATATLVVDRDRTATLAPQLDARVLARHVVPGQEVKKGEPLLTLGGAAVAQAQAD
EEEEEEEEEEEEEECCCCEEECCCHHHHHHHHHCCCCCHHCCCCCEEEECCHHHHHHHHH
YINAAAEWSRVKRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTPTQIRALESTPEAIGS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCC
YQLLAPIDGRVQQDIAMLGQVFSAGTPLMQLTDESYLWVEAQLTPTQTAHITVGSAALVQ
EEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCEEEEEECCEEEEE
VGDKTLAGKIIGRSHELDSVTRTEQVLVSMPNPDHVLHAGQFAELYFANTVANSADKAGG
ECCCHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCEEECCCHHHHEEHHHHHCCCCCCCC
IVLPDAALTRSGDGDWQIFIQDEDGFESIEVEVVQRQRGLSLVRGAELEKAQQAQLKVVV
EEECCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHCEEEEEE
AGAFFLASEQAKAGFDIHNH
EEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA