| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877048
Identifier: 160877048
GI number: 160877048
Start: 4646428
End: 4647120
Strand: Direct
Name: 160877048
Synonym: Sbal195_3944
Alternate gene names: NA
Gene position: 4646428-4647120 (Clockwise)
Preceding gene: 160877047
Following gene: 160877053
Centisome position: 86.89
GC content: 49.21
Gene sequence:
>693_bases ATGAAGAAATCACTGTACAGCGTTTTGGCCTTATCGACGGGAATGTTACTGGCTGGCAATGCCTTTGCAGCCGTATCAGG CAACATTGGTGGTACCTCTAATTACCTATGGCGCGGCGCGACCCAAACTAACGATGCAGTCGCAATCCAAGGTGGAATTG ACTACAGCCATGACTCTGGCTTCTATGCTGGCACTTGGGCATCGAATGTAGATTTTGGTGACGATACGAGCTACGAGCTG GATCTCTACGCGGGTTATGGCGGCAGTATTACCGAAGACATCAGCTACGACTTTGGCTACCTCTACTACGCCTATCCAGA CGCTCCTGGCAGCATTGATTTTGGTGAACTCCATGCTGCAGTGACTTGGAAGTGGCTTGAACTGGGTTACTCCCATGTCA TCAATGCCGGTGACGATGTCGCCGCCGATCCGTTAGATAATAAAGATCTTAGCTATCTTGCCGCGACTGTCTCTGTGCCT CTCACTGAAAAACTCAGCTTATCAGTGCACTATGGCTACTCAAGCGGTGATGTTGTGCAATCTTGGTTTGGCGAAGATAA CTATGCCGACTATAACGTCACACTCAGCGCAGATACCAGCATGGGCACAGTGTCGTTCATGGTTTCTGATACCGATCTCA CCGATGATGATGCCAAACTAGTACTCGGCTATTCCTACAGCTTTGATCTCTAA
Upstream 100 bases:
>100_bases CAAATCCCTTCTTAGAAAAAAACCAAGATGCACTAATGACCACTGCTTACTTAAGTGTGCCACTGGTGAATCGATAAATA AGTCAATCGAGGGGATGAGC
Downstream 100 bases:
>100_bases GGTCTAACATTTAGGGTCTTACGTCTAAGGGCTAAGGCCTAAGGCCTAACATCTAAGCCCTAAGCATAAAAAACGCCACC TTAAACGGTGGCGTTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKKSLYSVLALSTGMLLAGNAFAAVSGNIGGTSNYLWRGATQTNDAVAIQGGIDYSHDSGFYAGTWASNVDFGDDTSYEL DLYAGYGGSITEDISYDFGYLYYAYPDAPGSIDFGELHAAVTWKWLELGYSHVINAGDDVAADPLDNKDLSYLAATVSVP LTEKLSLSVHYGYSSGDVVQSWFGEDNYADYNVTLSADTSMGTVSFMVSDTDLTDDDAKLVLGYSYSFDL
Sequences:
>Translated_230_residues MKKSLYSVLALSTGMLLAGNAFAAVSGNIGGTSNYLWRGATQTNDAVAIQGGIDYSHDSGFYAGTWASNVDFGDDTSYEL DLYAGYGGSITEDISYDFGYLYYAYPDAPGSIDFGELHAAVTWKWLELGYSHVINAGDDVAADPLDNKDLSYLAATVSVP LTEKLSLSVHYGYSSGDVVQSWFGEDNYADYNVTLSADTSMGTVSFMVSDTDLTDDDAKLVLGYSYSFDL >Mature_230_residues MKKSLYSVLALSTGMLLAGNAFAAVSGNIGGTSNYLWRGATQTNDAVAIQGGIDYSHDSGFYAGTWASNVDFGDDTSYEL DLYAGYGGSITEDISYDFGYLYYAYPDAPGSIDFGELHAAVTWKWLELGYSHVINAGDDVAADPLDNKDLSYLAATVSVP LTEKLSLSVHYGYSSGDVVQSWFGEDNYADYNVTLSADTSMGTVSFMVSDTDLTDDDAKLVLGYSYSFDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24721; Mature: 24721
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLYSVLALSTGMLLAGNAFAAVSGNIGGTSNYLWRGATQTNDAVAIQGGIDYSHDSG CCHHHHHHHHHHCCEEEECCEEEEEECCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCC FYAGTWASNVDFGDDTSYELDLYAGYGGSITEDISYDFGYLYYAYPDAPGSIDFGELHAA EEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHEEEE VTWKWLELGYSHVINAGDDVAADPLDNKDLSYLAATVSVPLTEKLSLSVHYGYSSGDVVQ EEEEHHHCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHH SWFGEDNYADYNVTLSADTSMGTVSFMVSDTDLTDDDAKLVLGYSYSFDL HHCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MKKSLYSVLALSTGMLLAGNAFAAVSGNIGGTSNYLWRGATQTNDAVAIQGGIDYSHDSG CCHHHHHHHHHHCCEEEECCEEEEEECCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCC FYAGTWASNVDFGDDTSYELDLYAGYGGSITEDISYDFGYLYYAYPDAPGSIDFGELHAA EEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHEEEE VTWKWLELGYSHVINAGDDVAADPLDNKDLSYLAATVSVPLTEKLSLSVHYGYSSGDVVQ EEEEHHHCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHH SWFGEDNYADYNVTLSADTSMGTVSFMVSDTDLTDDDAKLVLGYSYSFDL HHCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA