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The map label for this gene is rsgA [H]

Identifier: 160877005

GI number: 160877005

Start: 4596807

End: 4597871

Strand: Direct

Name: rsgA [H]

Synonym: Sbal195_3901

Alternate gene names: 160877005

Gene position: 4596807-4597871 (Clockwise)

Preceding gene: 160876980

Following gene: 160877006

Centisome position: 85.97

GC content: 48.64

Gene sequence:

>1065_bases
GTGAGTAAAAAGAAACCCCTAAGCCAAGGTCAATTACGCCGTATGCGTGCTAATCACGAGAAGCGACTCAATCGTGACAG
TGGCGAAAAAAATACGCCAGAGTTACAGGATAGTTCACTGGGGCAAGAACAGCCCGGTACTGTGATTTCTCGTTTTGGCC
AACATGCCGACATAGAAACCGAAAGCGGCCAAGTTGTGCGCTGTAATATTCGCCGTGCCGTCACCAGTTTAGTCACTGGC
GATAAAGTGATCGTACGCTTAGCCATTGAGAGCCAAGCCAATAGCGGCATCGCAGGTATTGTTGAAGCCGTTCACCCACG
TCGCTCATCACTTACACGCCCAGATTTATACGATGGCGTGAAAATCATCGCCTCGAATATCGACCAAATTTTGATTGTGT
CCTCGGTATTACCCAGCTTTACCACCCAGATCATCGATCGTTATTTAGTGGCTGCCGAAGATACCGATATTCCGCCTATC
ATCATTTTGAATAAAATTGACCTGCTCAACCCCGATGAAGCGCAGGCAATCGATGAAGCGCTGCAGCGCTATAAAGATAT
TGGCTATCCAGTTTATAAAGTCAGCAGCAAGTTAGGTGATGGTATCGATACCATCAAAGACATACTCAAAGATAAAGTCA
GCGTATTTGCCGGCCAATCTGGTGTGGGTAAGTCATCGATCATCAATGCCCTATTACCCGATGCCGAACTGGTGATTGGT
GATGTTTCCGATAACTCAGGTTTAGGTCAACACACCACCACCACAGCCAAACTGTTGCACTTGCCTAGTGGCGGCGATTT
AATCGACTCCCCAGGCGTGCGCGAATTCGCCCTCTGGCATCTTCCTGCACAACGTGTAGGCTGGTGCTTTATCGAGTTTC
GCGAGTATCTTGGCGCGTGTAAGTTCCGTGATTGTAAACACGGTGACGATCCCGGCTGTGCACTGCAAGAAGCCCTGAGC
CAAGGCAAGATCAGCGCAGATCGCTTTCATAATTACCATAAAATTATCGCCAGCTTAGATGAACAACGTCATGCCCGCCA
TTTCCGTGCGGCCACTGACGAATAA

Upstream 100 bases:

>100_bases
TCATGTCAGTTAGCCTAAATTCAGGCTTTTTTATTCAAGAGCGTGTATCATACTGCTTTTTTCCGACACAAAAAATCACC
TAATTGACGAAGACGAATCA

Downstream 100 bases:

>100_bases
CGACTTATTGATAAATAACAACAGTCTCAGCAAAGATTGAGCAGTAAGAAAAGGAATTAAAATTGGATAAAGTCAAAATT
GCGCTGCAGTACATGCTGCC

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSKKKPLSQGQLRRMRANHEKRLNRDSGEKNTPELQDSSLGQEQPGTVISRFGQHADIETESGQVVRCNIRRAVTSLVTG
DKVIVRLAIESQANSGIAGIVEAVHPRRSSLTRPDLYDGVKIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPI
IILNKIDLLNPDEAQAIDEALQRYKDIGYPVYKVSSKLGDGIDTIKDILKDKVSVFAGQSGVGKSSIINALLPDAELVIG
DVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFREYLGACKFRDCKHGDDPGCALQEALS
QGKISADRFHNYHKIIASLDEQRHARHFRAATDE

Sequences:

>Translated_354_residues
MSKKKPLSQGQLRRMRANHEKRLNRDSGEKNTPELQDSSLGQEQPGTVISRFGQHADIETESGQVVRCNIRRAVTSLVTG
DKVIVRLAIESQANSGIAGIVEAVHPRRSSLTRPDLYDGVKIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPI
IILNKIDLLNPDEAQAIDEALQRYKDIGYPVYKVSSKLGDGIDTIKDILKDKVSVFAGQSGVGKSSIINALLPDAELVIG
DVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFREYLGACKFRDCKHGDDPGCALQEALS
QGKISADRFHNYHKIIASLDEQRHARHFRAATDE
>Mature_353_residues
SKKKPLSQGQLRRMRANHEKRLNRDSGEKNTPELQDSSLGQEQPGTVISRFGQHADIETESGQVVRCNIRRAVTSLVTGD
KVIVRLAIESQANSGIAGIVEAVHPRRSSLTRPDLYDGVKIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPII
ILNKIDLLNPDEAQAIDEALQRYKDIGYPVYKVSSKLGDGIDTIKDILKDKVSVFAGQSGVGKSSIINALLPDAELVIGD
VSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFREYLGACKFRDCKHGDDPGCALQEALSQ
GKISADRFHNYHKIIASLDEQRHARHFRAATDE

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=354, Percent_Identity=54.5197740112994, Blast_Score=390, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 38905; Mature: 38773

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKPLSQGQLRRMRANHEKRLNRDSGEKNTPELQDSSLGQEQPGTVISRFGQHADIET
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
ESGQVVRCNIRRAVTSLVTGDKVIVRLAIESQANSGIAGIVEAVHPRRSSLTRPDLYDGV
CCCCEEEEHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHCCCCCCHHHHH
KIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPIIILNKIDLLNPDEAQAIDEA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHH
LQRYKDIGYPVYKVSSKLGDGIDTIKDILKDKVSVFAGQSGVGKSSIINALLPDAELVIG
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEE
DVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFREYLGAC
ECCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCC
KFRDCKHGDDPGCALQEALSQGKISADRFHNYHKIIASLDEQRHARHFRAATDE
CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKKKPLSQGQLRRMRANHEKRLNRDSGEKNTPELQDSSLGQEQPGTVISRFGQHADIET
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
ESGQVVRCNIRRAVTSLVTGDKVIVRLAIESQANSGIAGIVEAVHPRRSSLTRPDLYDGV
CCCCEEEEHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHCCCCCCHHHHH
KIIASNIDQILIVSSVLPSFTTQIIDRYLVAAEDTDIPPIIILNKIDLLNPDEAQAIDEA
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHH
LQRYKDIGYPVYKVSSKLGDGIDTIKDILKDKVSVFAGQSGVGKSSIINALLPDAELVIG
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEE
DVSDNSGLGQHTTTTAKLLHLPSGGDLIDSPGVREFALWHLPAQRVGWCFIEFREYLGAC
ECCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCC
KFRDCKHGDDPGCALQEALSQGKISADRFHNYHKIIASLDEQRHARHFRAATDE
CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]