| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160877003
Identifier: 160877003
GI number: 160877003
Start: 4594476
End: 4594931
Strand: Reverse
Name: 160877003
Synonym: Sbal195_3899
Alternate gene names: NA
Gene position: 4594931-4594476 (Counterclockwise)
Preceding gene: 160877004
Following gene: 160877002
Centisome position: 85.93
GC content: 42.54
Gene sequence:
>456_bases ATGCGTATTCAACAATTACGTGATCTACTTGAGTATGTGGCAAATTGCCGCTTAGATATGGCGCAACTCTATGGCCGACT CAACAATCAAGCTGACTCGGCTCGTGTGAAAATGATGCTGGATTATTTTGAGTCACATCAAAAAACCATGGCAGAGAAAC TGCGCGATTATATAGAAGAAGCACCACATCGTATTCTTGATACTTGGTACAAAGACTTCACCTTTGAAGACTTTACCAAG CGTTGCCAAGATACTATGTTGCCCGCGAACATGAATGAAGACGATGTGCTCAACTTGCACTTAGACTTAGAAAATCGTCT GATTGGTTTGTTAGAAAAAACAGTTAACTCAACGACTGCCGAAGATGCGCGTAATGCGTTAGCCAACTTGATCCGAGTAG AGAAAACTCAGCAACAACGTTTGGTCCACAGCACGATTCGGATGGACGATATCTAA
Upstream 100 bases:
>100_bases TTATGACCTTGTTCAAATATTCGTAACGCTTTTACTCACATAATGAAGCTAGACAAAATTAATAGCGCCAAGTAGTTGGC CTGACAGTGGAGTGCATTAT
Downstream 100 bases:
>100_bases ACCGTCATCGCTTCTCAATTCCCAAAGCCAGCCTAGTGCTGGCTTTTGTCTTTGTGTCATCTATGTATCGACGACTTTTG CGCTACTTTGCTCCATTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLDYFESHQKTMAEKLRDYIEEAPHRILDTWYKDFTFEDFTK RCQDTMLPANMNEDDVLNLHLDLENRLIGLLEKTVNSTTAEDARNALANLIRVEKTQQQRLVHSTIRMDDI
Sequences:
>Translated_151_residues MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLDYFESHQKTMAEKLRDYIEEAPHRILDTWYKDFTFEDFTK RCQDTMLPANMNEDDVLNLHLDLENRLIGLLEKTVNSTTAEDARNALANLIRVEKTQQQRLVHSTIRMDDI >Mature_151_residues MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLDYFESHQKTMAEKLRDYIEEAPHRILDTWYKDFTFEDFTK RCQDTMLPANMNEDDVLNLHLDLENRLIGLLEKTVNSTTAEDARNALANLIRVEKTQQQRLVHSTIRMDDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17882; Mature: 17882
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLDYFESHQKTMAEKLRDYIEE CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APHRILDTWYKDFTFEDFTKRCQDTMLPANMNEDDVLNLHLDLENRLIGLLEKTVNSTTA HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCHH EDARNALANLIRVEKTQQQRLVHSTIRMDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLDYFESHQKTMAEKLRDYIEE CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APHRILDTWYKDFTFEDFTKRCQDTMLPANMNEDDVLNLHLDLENRLIGLLEKTVNSTTA HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCHH EDARNALANLIRVEKTQQQRLVHSTIRMDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA