| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yjeE [H]
Identifier: 160877001
GI number: 160877001
Start: 4592160
End: 4592618
Strand: Reverse
Name: yjeE [H]
Synonym: Sbal195_3897
Alternate gene names: 160877001
Gene position: 4592618-4592160 (Counterclockwise)
Preceding gene: 160877002
Following gene: 160877000
Centisome position: 85.89
GC content: 42.7
Gene sequence:
>459_bases ATGACAGAGTTAACTTTTTTCTTAGACAACGAAGACGACACTATTGCGGTTGGGCAAAAATTAGCCCGCCATGTCCAAGC GCCTTTGACTCTGTATCTTACGGGTGATTTAGGCGCCGGTAAAACGACGCTGAGTCGCGGCTTAATTCAAGGTTTGGGCC ATAAAGGGGCGGTTAAAAGCCCGACTTACACTTTAGTTGAACCATATGAGCTAGAGGGTGTCGAAGTTTATCATTTTGAT TTGTATCGTTTAAACGATCCAGAAGAACTCGAGTTTATGGGTATTCGTGATTACTTCACGGATAAAAGTCTGTGCATTGT TGAATGGCCAGATAAGGGAGAGGGTTTATTGCCCGATGCCGATGTCCATATGCATTTAAGTTATCAAAATAGTGGGCGTG AAATACGCATAGAGGCCTTGTCAGAGCCAGGTGAAAAGTTATTAAAAGCGATAAAATAA
Upstream 100 bases:
>100_bases GGTATGTGAGACTCAAGCGGGGCTGGACTTTGATCTGTGCCCTGCGCCTTTTTAGGGTTGAGTCGCTTCTCCATTAATAA CAGCAGTGATATAAGCGGAT
Downstream 100 bases:
>100_bases AAACTAAAATGATAAAAAATAACCCTTATTTTCAAATTATTATTCTTTCTTTATGTTCTTTTTTATCTGTGGCGGCCCAT GCGGCTAATCAGTTAGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTELTFFLDNEDDTIAVGQKLARHVQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKSPTYTLVEPYELEGVEVYHFD LYRLNDPEELEFMGIRDYFTDKSLCIVEWPDKGEGLLPDADVHMHLSYQNSGREIRIEALSEPGEKLLKAIK
Sequences:
>Translated_152_residues MTELTFFLDNEDDTIAVGQKLARHVQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKSPTYTLVEPYELEGVEVYHFD LYRLNDPEELEFMGIRDYFTDKSLCIVEWPDKGEGLLPDADVHMHLSYQNSGREIRIEALSEPGEKLLKAIK >Mature_151_residues TELTFFLDNEDDTIAVGQKLARHVQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKSPTYTLVEPYELEGVEVYHFDL YRLNDPEELEFMGIRDYFTDKSLCIVEWPDKGEGLLPDADVHMHLSYQNSGREIRIEALSEPGEKLLKAIK
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=141, Percent_Identity=60.2836879432624, Blast_Score=187, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17069; Mature: 16937
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELTFFLDNEDDTIAVGQKLARHVQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKS CCEEEEEEECCCCEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC PTYTLVEPYELEGVEVYHFDLYRLNDPEELEFMGIRDYFTDKSLCIVEWPDKGEGLLPDA CCEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DVHMHLSYQNSGREIRIEALSEPGEKLLKAIK CEEEEEEECCCCCEEEEEECCCCHHHHHHHCC >Mature Secondary Structure TELTFFLDNEDDTIAVGQKLARHVQAPLTLYLTGDLGAGKTTLSRGLIQGLGHKGAVKS CEEEEEEECCCCEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC PTYTLVEPYELEGVEVYHFDLYRLNDPEELEFMGIRDYFTDKSLCIVEWPDKGEGLLPDA CCEEEECCEECCCEEEEEEEEEECCCCCCEEEEEEHHHCCCCCEEEEECCCCCCCCCCCC DVHMHLSYQNSGREIRIEALSEPGEKLLKAIK CEEEEEEECCCCCEEEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]