| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pld [H]
Identifier: 160876881
GI number: 160876881
Start: 4451349
End: 4453115
Strand: Reverse
Name: pld [H]
Synonym: Sbal195_3777
Alternate gene names: 160876881
Gene position: 4453115-4451349 (Counterclockwise)
Preceding gene: 160876883
Following gene: 160876880
Centisome position: 83.28
GC content: 50.93
Gene sequence:
>1767_bases ATGAATCGTACCGTAACTCGTCGTGACTTTTTGGCTATGTCGGCCAAAGGTGTTGGCGTTGCTGTGATCTCTTACGGCTT GATGGGCTGTAGTGATAGTAATGATGATAATTCTGTACCCGCGCAATTTTTACATGGGATTGCCAGTGGCGATCCTGCTA TTGACGCTGTGATCCTTTGGACCCGTGTCACGCCTGAGTCTGAGGGCGATGTAAAAGTGAGCTGGCAAGTGGCAAGCGAT GCTGCCTTTAGTCAATTAGTGACCACGGGTGAGATGGTCACTAATTCAAGTCGTGACTACACGGTTAAGATTGATGCCCG CGGCTTACGTGCTGGCCAAAACTATTTTTACCGCTTTATGACAGGTGACAAAACCTCAGCCGTGGGTAAAACCCGTACTC TGCCTGAGGGCGATGTGAGTTCTGTCAAATTGGCGGTGATGTCCTGTGCGAACTTTCCAGCTGGATACTTTAACGTCTAT GAATTAGCGGCGGCGCAGGATGACTTAGATGCCGTGGTGCATTTAGGCGATTACATCTATGAATATGCCCGTGGCGGTTA TGCCAGTGAGCATGCTGCAGAGCTTGGCCGTGAAGTATTACCGGCCACTGAGTTGCTGACATTGGGCGATTATCGCACCC GTTATGGCCAGTATCATACCGATGCGAGTCTGCAAAAGTTACACGCGAAAGTGCCTTTTATCACAGTATGGGATGACCAC GAAGTGGCCAACGATACTTGGCGTGATGGCGCCGAGAATCATAATGAAGGCGAAGGCGATTTTGCCGTCCGCAAAGAAGC GGCACTGCAAGCTTATTTCGAATGGTTGCCTATTCGTCCATGGCGCGAAGGGAACCATGAAGAGATTTACCGCAGCTTCA GTTACGGCAATCTTGTCGACCTGCACATGCTCGATACCCGTGTATTGGCCCGTGATAAACAGCTCGATTATGCCGACTAT ATGGATCCGACAACGGGTTCGTTTGCGGGCGAGCGTTTCCTTGCCGATGTGACTTCGACCACTCGCACTATGCTGGGTCT GACGCAATTGTTATGGCTGCAGGGCACTCTGCTGCAAGCAACGGGCAAGTGGCAGGTGTTAGGGCAACAGATTTTGATGG GCAAGATGTCATTGCCGGCGGCGATTGCGACTCAGCAGATGAGCATTCCCCAATATGCCATGTTAGGTGCGTTAGCTAAG CTAGCGGCGCGTGCGGCGGCAAATGATCCCACGCTGACCGCCCAAGAGTTGCAATATCTTCAGGCTAATCAAGCCTTATT AACCCCAGAAGTTATCGCACTGCTGCAATTACCTGCCATTCCATACAACTTAGATGCTTGGGACGGTTATGCCTATGAGC GTGAGGTGATTTTAGGTACGGCTAAATCGAAAAACCTCAACCTAGTCGTGATCGCGGGCGATACCCATAATGCTTGGGCT AACGAGCTTAAAGATGTGAATGGCGATACCGTTGGGGTGGAGTTTGCGACCAGCTCAGTGTCTTCACCAGGTCTTGAGTA CTATTTGAATCTGCCCGCTGAGCAGATCCCTGCGACTGAGGCGGCGATCGTCGAGTTAGTGCCAGATCTTAAGTACGCTA ACTTAAGAGATCGCGGCTTTATGACGCTCACTTTCACCGCTGATGAGGTGCGCAGCGACTGGCATTATGTGGATACCATT CTATCGAAGGATTTCCAAGCGGCAACGGCACGTGGTTATAGCGCCAAGGCAAAAGTGGGCGAGCATGTGATTACGCCTAT CGTTTAA
Upstream 100 bases:
>100_bases GCTGACAAAGATGTCACAAATGTGTAACAGTGATGTCTCACAATCGGGGTCTCATTAGACCTCATACCAGTGAAGCCTTT TCTAACAAGGAATAATAATA
Downstream 100 bases:
>100_bases CGCAGGTATTTATTCGCTGTTTTTAGGCCACCTTAGAGTGGCCTTTTTGTTGCTTTTTGCCTAAAAAGGCAAAATAAATG TCTGTTGTCACGCAAGTTCT
Product: alkaline phosphatase
Products: NA
Alternate protein names: PLD [H]
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDSNDDNSVPAQFLHGIASGDPAIDAVILWTRVTPESEGDVKVSWQVASD AAFSQLVTTGEMVTNSSRDYTVKIDARGLRAGQNYFYRFMTGDKTSAVGKTRTLPEGDVSSVKLAVMSCANFPAGYFNVY ELAAAQDDLDAVVHLGDYIYEYARGGYASEHAAELGREVLPATELLTLGDYRTRYGQYHTDASLQKLHAKVPFITVWDDH EVANDTWRDGAENHNEGEGDFAVRKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDLHMLDTRVLARDKQLDYADY MDPTTGSFAGERFLADVTSTTRTMLGLTQLLWLQGTLLQATGKWQVLGQQILMGKMSLPAAIATQQMSIPQYAMLGALAK LAARAAANDPTLTAQELQYLQANQALLTPEVIALLQLPAIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWA NELKDVNGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYANLRDRGFMTLTFTADEVRSDWHYVDTI LSKDFQAATARGYSAKAKVGEHVITPIV
Sequences:
>Translated_588_residues MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDSNDDNSVPAQFLHGIASGDPAIDAVILWTRVTPESEGDVKVSWQVASD AAFSQLVTTGEMVTNSSRDYTVKIDARGLRAGQNYFYRFMTGDKTSAVGKTRTLPEGDVSSVKLAVMSCANFPAGYFNVY ELAAAQDDLDAVVHLGDYIYEYARGGYASEHAAELGREVLPATELLTLGDYRTRYGQYHTDASLQKLHAKVPFITVWDDH EVANDTWRDGAENHNEGEGDFAVRKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDLHMLDTRVLARDKQLDYADY MDPTTGSFAGERFLADVTSTTRTMLGLTQLLWLQGTLLQATGKWQVLGQQILMGKMSLPAAIATQQMSIPQYAMLGALAK LAARAAANDPTLTAQELQYLQANQALLTPEVIALLQLPAIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWA NELKDVNGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYANLRDRGFMTLTFTADEVRSDWHYVDTI LSKDFQAATARGYSAKAKVGEHVITPIV >Mature_588_residues MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDSNDDNSVPAQFLHGIASGDPAIDAVILWTRVTPESEGDVKVSWQVASD AAFSQLVTTGEMVTNSSRDYTVKIDARGLRAGQNYFYRFMTGDKTSAVGKTRTLPEGDVSSVKLAVMSCANFPAGYFNVY ELAAAQDDLDAVVHLGDYIYEYARGGYASEHAAELGREVLPATELLTLGDYRTRYGQYHTDASLQKLHAKVPFITVWDDH EVANDTWRDGAENHNEGEGDFAVRKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVDLHMLDTRVLARDKQLDYADY MDPTTGSFAGERFLADVTSTTRTMLGLTQLLWLQGTLLQATGKWQVLGQQILMGKMSLPAAIATQQMSIPQYAMLGALAK LAARAAANDPTLTAQELQYLQANQALLTPEVIALLQLPAIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWA NELKDVNGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYANLRDRGFMTLTFTADEVRSDWHYVDTI LSKDFQAATARGYSAKAKVGEHVITPIV
Specific function: Catalyzes the hydrolysis of the ester bond between the phosphatidic acid and alcohol moieties of phospholipids. Can catalyze a transphosphatidylation reaction in the presence of high concentrations of primary alcohols. Has also phosphatase activity toward
COG id: COG3540
COG function: function code P; Phosphodiesterase/alkaline phosphatase D
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PhoD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018946 - InterPro: IPR006311 [H]
Pfam domain/function: PF09423 PhoD [H]
EC number: =3.1.4.4 [H]
Molecular weight: Translated: 64657; Mature: 64657
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDSNDDNSVPAQFLHGIASGDPAIDAVILW CCCCCCHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEE TRVTPESEGDVKVSWQVASDAAFSQLVTTGEMVTNSSRDYTVKIDARGLRAGQNYFYRFM EECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEE TGDKTSAVGKTRTLPEGDVSSVKLAVMSCANFPAGYFNVYELAAAQDDLDAVVHLGDYIY ECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH EYARGGYASEHAAELGREVLPATELLTLGDYRTRYGQYHTDASLQKLHAKVPFITVWDDH HHHCCCCCHHHHHHHHHHHCCHHHHEECCCHHHHCCCCCCCHHHHHHHCCCCEEEEECCC EVANDTWRDGAENHNEGEGDFAVRKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVD CCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEE LHMLDTRVLARDKQLDYADYMDPTTGSFAGERFLADVTSTTRTMLGLTQLLWLQGTLLQA EEEHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEC TGKWQVLGQQILMGKMSLPAAIATQQMSIPQYAMLGALAKLAARAAANDPTLTAQELQYL CCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QANQALLTPEVIALLQLPAIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWA HCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCHHH NELKDVNGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYANLRDRGF HHHHCCCCCEEEEEEECCCCCCCCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCCCC MTLTFTADEVRSDWHYVDTILSKDFQAATARGYSAKAKVGEHVITPIV EEEEEEHHHHHCCHHHHHHHHHCCHHHHHCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure MNRTVTRRDFLAMSAKGVGVAVISYGLMGCSDSNDDNSVPAQFLHGIASGDPAIDAVILW CCCCCCHHHHHHCCCCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEE TRVTPESEGDVKVSWQVASDAAFSQLVTTGEMVTNSSRDYTVKIDARGLRAGQNYFYRFM EECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEE TGDKTSAVGKTRTLPEGDVSSVKLAVMSCANFPAGYFNVYELAAAQDDLDAVVHLGDYIY ECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH EYARGGYASEHAAELGREVLPATELLTLGDYRTRYGQYHTDASLQKLHAKVPFITVWDDH HHHCCCCCHHHHHHHHHHHCCHHHHEECCCHHHHCCCCCCCHHHHHHHCCCCEEEEECCC EVANDTWRDGAENHNEGEGDFAVRKEAALQAYFEWLPIRPWREGNHEEIYRSFSYGNLVD CCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEE LHMLDTRVLARDKQLDYADYMDPTTGSFAGERFLADVTSTTRTMLGLTQLLWLQGTLLQA EEEHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEC TGKWQVLGQQILMGKMSLPAAIATQQMSIPQYAMLGALAKLAARAAANDPTLTAQELQYL CCCHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH QANQALLTPEVIALLQLPAIPYNLDAWDGYAYEREVILGTAKSKNLNLVVIAGDTHNAWA HCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCHHH NELKDVNGDTVGVEFATSSVSSPGLEYYLNLPAEQIPATEAAIVELVPDLKYANLRDRGF HHHHCCCCCEEEEEEECCCCCCCCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCCCC MTLTFTADEVRSDWHYVDTILSKDFQAATARGYSAKAKVGEHVITPIV EEEEEEHHHHHCCHHHHHHHHHCCHHHHHCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12441393 [H]