| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is rstB [H]
Identifier: 160876794
GI number: 160876794
Start: 4352355
End: 4353647
Strand: Reverse
Name: rstB [H]
Synonym: Sbal195_3689
Alternate gene names: 160876794
Gene position: 4353647-4352355 (Counterclockwise)
Preceding gene: 160876795
Following gene: 160876790
Centisome position: 81.42
GC content: 48.72
Gene sequence:
>1293_bases ATGAAGAAGTTGATGACTTCACTGGTGCTGGTGGTGCTGGTGGCCATTGCGAGCCTAGGCTGGTCGATAAGTGAGTTTGC CAGTCTGCTAGATCCTGATAATGACACGCAAACCCCAGCCACTCATCTTGCGGCATTAAAACTGTTGGGCGGCACACTGG CGCAAACGCTCGATAACGATAGCGTTAACAATCACAGTTTTATCGCAAACTGGAACCAGCTAAATTCAGAGCAATTGTCT TTAGCGAGTGAAGCCGATTTCGTCTTACCCTCAGCCCTAAAAACCGCGTTTTATGCGGGAGAATCGCTGCTGCTGGAGTC CGATGACGGTATCTCCTTGCATTATTTACTGCCGAAAACGGGGCAGGTATTGAACATCAATACCGATATTGTCACGCCCA CCGATGGCAACTTTGACTTGAATAAGCTGTATACCATGCTTTTTTATGGTGGTGTGGTGCTGATATTGTTGGTGTGGGTG TCGCCCTTGATCCGTCAGCTGGTTAATCTCAGTAAGGCGACCCAAGCGTTTGGCATGGGGGAGTTGCAGCAGAGAATTCC TGTTAGAAAAATGTCTTACATAGGCACTATTGAAAGCGAATTCAACCGCATGGCGGATCGTATTCAGCAATTGATCGATG ACAATAAACTGCTCAGTCGGGCTGTTTCTCATGATTTAAAAACTCCGATCGCACGGTTAAGATTCGGCATTGAGGCGCTG GAAGAAACCCAAAGCGAACAGCTCAGAGTGAAGTATTTCCAGCGCTTGAACCGCGATCTAGACACGATGGAAGACTTGGT GATGACGCTGCTGAGTTATGCCCGCCTCGATGAAGCGAATATCCAGCCCGATTGGCAGTCGATTGAACTCAATGCTTGGC TACTCGAAAAGTATCAAGGCCAAGTGTACCCCGATTTTTCAGTTGAACTGGTTTCCTATCCCACAGCACTCAAGATCAAG ACAGACCCTAAGTACTTATCAATGCAGGTGAATAATTTGCTCAATAATGCGCTGCGTTTTGGTAAGGCAAAGATTCGGCT GACGTTGGCAGTCGAGGAGGGCGCGACCTGGTTACACGTTGACGATGACGGTCCAGGCATAGACGAACTGGAGTCTGCGC AGGTGATTAAGCCTTTTGTGCGTGGTCAGCACAGCCGTGGAAATTCCGGTCATGGCATGGGATTGGCGATTGTCGACAGA ATTGGTTGTTGGATGAATGCCCCATTACGTATTGGACGCTCCCCTGAGCTCGGTGGCGCTCGCATGTCACTAAAATTCAA GGCTGAAGTTTAA
Upstream 100 bases:
>100_bases TACGCAAAAAATTGCAGGAAGCGTTAAGCCAGCCCTATAAAGTGAAAACCATCCGTGGCAAGGGATACCTGTTTTGCCGC GACGAAGGTGAGCAAGCTTT
Downstream 100 bases:
>100_bases CGCTGGAGTTTAAGGCTGAAGTTTAGGGTTGGAGATTTAGATCGGAATTTAAGGCTGAATTTTAAAGCGGAGTTTAAGGC AAGAGTTTAAGGCAAGAGTT
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKKLMTSLVLVVLVAIASLGWSISEFASLLDPDNDTQTPATHLAALKLLGGTLAQTLDNDSVNNHSFIANWNQLNSEQLS LASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKTGQVLNINTDIVTPTDGNFDLNKLYTMLFYGGVVLILLVWV SPLIRQLVNLSKATQAFGMGELQQRIPVRKMSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQGQVYPDFSVELVSYPTALKIK TDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHVDDDGPGIDELESAQVIKPFVRGQHSRGNSGHGMGLAIVDR IGCWMNAPLRIGRSPELGGARMSLKFKAEV
Sequences:
>Translated_430_residues MKKLMTSLVLVVLVAIASLGWSISEFASLLDPDNDTQTPATHLAALKLLGGTLAQTLDNDSVNNHSFIANWNQLNSEQLS LASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKTGQVLNINTDIVTPTDGNFDLNKLYTMLFYGGVVLILLVWV SPLIRQLVNLSKATQAFGMGELQQRIPVRKMSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQGQVYPDFSVELVSYPTALKIK TDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHVDDDGPGIDELESAQVIKPFVRGQHSRGNSGHGMGLAIVDR IGCWMNAPLRIGRSPELGGARMSLKFKAEV >Mature_430_residues MKKLMTSLVLVVLVAIASLGWSISEFASLLDPDNDTQTPATHLAALKLLGGTLAQTLDNDSVNNHSFIANWNQLNSEQLS LASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKTGQVLNINTDIVTPTDGNFDLNKLYTMLFYGGVVLILLVWV SPLIRQLVNLSKATQAFGMGELQQRIPVRKMSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQGQVYPDFSVELVSYPTALKIK TDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHVDDDGPGIDELESAQVIKPFVRGQHSRGNSGHGMGLAIVDR IGCWMNAPLRIGRSPELGGARMSLKFKAEV
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=276, Percent_Identity=35.1449275362319, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1789808, Length=255, Percent_Identity=32.156862745098, Blast_Score=131, Evalue=7e-32, Organism=Escherichia coli, GI1790346, Length=234, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790551, Length=250, Percent_Identity=27.2, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1790861, Length=215, Percent_Identity=26.5116279069767, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1788393, Length=275, Percent_Identity=23.2727272727273, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI87081816, Length=100, Percent_Identity=36, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1788279, Length=277, Percent_Identity=24.9097472924188, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788549, Length=233, Percent_Identity=24.0343347639485, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47935; Mature: 47935
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLMTSLVLVVLVAIASLGWSISEFASLLDPDNDTQTPATHLAALKLLGGTLAQTLDND CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC SVNNHSFIANWNQLNSEQLSLASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKT CCCCCCEEEEHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCC GQVLNINTDIVTPTDGNFDLNKLYTMLFYGGVVLILLVWVSPLIRQLVNLSKATQAFGMG CCEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ELQQRIPVRKMSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCC QVYPDFSVELVSYPTALKIKTDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHV CCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCEEEEE DDDGPGIDELESAQVIKPFVRGQHSRGNSGHGMGLAIVDRIGCWMNAPLRIGRSPELGGA CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCC RMSLKFKAEV EEEEEEEECC >Mature Secondary Structure MKKLMTSLVLVVLVAIASLGWSISEFASLLDPDNDTQTPATHLAALKLLGGTLAQTLDND CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC SVNNHSFIANWNQLNSEQLSLASEADFVLPSALKTAFYAGESLLLESDDGISLHYLLPKT CCCCCCEEEEHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCC GQVLNINTDIVTPTDGNFDLNKLYTMLFYGGVVLILLVWVSPLIRQLVNLSKATQAFGMG CCEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH ELQQRIPVRKMSYIGTIESEFNRMADRIQQLIDDNKLLSRAVSHDLKTPIARLRFGIEAL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EETQSEQLRVKYFQRLNRDLDTMEDLVMTLLSYARLDEANIQPDWQSIELNAWLLEKYQG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHCC QVYPDFSVELVSYPTALKIKTDPKYLSMQVNNLLNNALRFGKAKIRLTLAVEEGATWLHV CCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCEEEEE DDDGPGIDELESAQVIKPFVRGQHSRGNSGHGMGLAIVDRIGCWMNAPLRIGRSPELGGA CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCC RMSLKFKAEV EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]