| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876114
Identifier: 160876114
GI number: 160876114
Start: 3573266
End: 3574417
Strand: Direct
Name: 160876114
Synonym: Sbal195_3005
Alternate gene names: NA
Gene position: 3573266-3574417 (Clockwise)
Preceding gene: 160876113
Following gene: 160876115
Centisome position: 66.82
GC content: 47.74
Gene sequence:
>1152_bases TTGCCTACATCAACTGCATTAGTCTTAGGTGGCGGCGGCGCAAGAGCCGCCTATCAAGTCGGCGTGCTAAAAGCACTGGT TCAGCTTTATCCGCGTAATCATGGCATTCCCTTTAAAATCATTTGTGGCACCTCGGCAGGTGCCATTAATGGCACTTCCA TTGCCACCCATGCTTCTTGTTTTCATCTTGGCGTCAAAAAGCTCGAATGGGTATGGCGCCATTTTGAAACTCGCAAAGTC TATCGCGCATCCATCACTGGCGTGCTTGGTCACCTTGGTAAAATGGCACTCAAAGGCATGCAGGATGATAAGGTTAATAC CGACGCTGGCAGTCTGCTCGATAACGATCCTCTTCGAAAACTGCTCAATGAATTAATCGATTTTAAACGCATCGATCGTA ATATTCGCAGCGGCGCCCTCACCGCACTCAGCGTCGATGCCTCTTGCTACAACAACTCACGCTCAGTAAGTTTTTTCCAA GCATCACGGGATATCGAAAACTGGACCCGCGCTAGACGCAGTGGCGAACGTATGATGCTCAACACTGAACACCTTCTCGC TAGTTCGGCCATTCCTATGGTGTTCCCCTCGATTAAACTCAACCAAGCCTATTATGGCGATGGCTCGGTCCACCAGCTGG CTCCGCTCTCAAGCCCTATCCATTTAGGCGCTGAAAAACTCTTAGTCATTAACTTAGAGAGTCCACATAAGCATTTCCCA ATGGAACTGGAATATCACCCGAAAACGGCATCCATAGCGGGCCATCTGCTCGATACGATCTTTTCCGACACTTTAAACAG CGACCTTGAGCGACTTGAAAGGATCAATAACACCTTAAGCCTGATCCCCGAGTCAAGCCGTAACAAGCTGGCCTTGCATC CAATTAAAACCTTAGTCATCAAGCCCAGCGAAGACCTCAGCAAAATTGCCGCCCGTTTCTACGATGATATGCCATGGGCA GTAAAAACCTTACTCGGTTTTATCGGCATTGATAGACAATCCGACTCGAGTATCGTGTCTTACCTATTATTCGAAAAAAC CTACACCAGCGCGTTGATCGACCTAGGCTACAAAGATGCCATGGAGCAAATCGTCGAACTTAAAGCCTTTTTTGATTTAA ATTCGGAAAATAGCGCTGACTCTCATCGCTAA
Upstream 100 bases:
>100_bases GATAAATCGAAATTTACAACTAATTGACTCTACCGACTTGCTTTTTATAGGGGGGCGTTGCTTTAATAAAACTATTAAAA CAATAAATTGAGTCTGAAGA
Downstream 100 bases:
>100_bases CAGCTATGATGCAGAACTATGGACTAAAACTGATTTATAAAGGTGAGTTGGTTTAGCTGTTCAAGCCTAAGATGAATGAT ACAACTCATTAAAATAAAGG
Product: patatin
Products: NA
Alternate protein names: Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin Like Phospholipase; Patatin-Like Phospholipase; Patatin Family Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Phospholipase; Alpha-Beta Hydrolase Superfamily Protein
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MPTSTALVLGGGGARAAYQVGVLKALVQLYPRNHGIPFKIICGTSAGAINGTSIATHASCFHLGVKKLEWVWRHFETRKV YRASITGVLGHLGKMALKGMQDDKVNTDAGSLLDNDPLRKLLNELIDFKRIDRNIRSGALTALSVDASCYNNSRSVSFFQ ASRDIENWTRARRSGERMMLNTEHLLASSAIPMVFPSIKLNQAYYGDGSVHQLAPLSSPIHLGAEKLLVINLESPHKHFP MELEYHPKTASIAGHLLDTIFSDTLNSDLERLERINNTLSLIPESSRNKLALHPIKTLVIKPSEDLSKIAARFYDDMPWA VKTLLGFIGIDRQSDSSIVSYLLFEKTYTSALIDLGYKDAMEQIVELKAFFDLNSENSADSHR
Sequences:
>Translated_383_residues MPTSTALVLGGGGARAAYQVGVLKALVQLYPRNHGIPFKIICGTSAGAINGTSIATHASCFHLGVKKLEWVWRHFETRKV YRASITGVLGHLGKMALKGMQDDKVNTDAGSLLDNDPLRKLLNELIDFKRIDRNIRSGALTALSVDASCYNNSRSVSFFQ ASRDIENWTRARRSGERMMLNTEHLLASSAIPMVFPSIKLNQAYYGDGSVHQLAPLSSPIHLGAEKLLVINLESPHKHFP MELEYHPKTASIAGHLLDTIFSDTLNSDLERLERINNTLSLIPESSRNKLALHPIKTLVIKPSEDLSKIAARFYDDMPWA VKTLLGFIGIDRQSDSSIVSYLLFEKTYTSALIDLGYKDAMEQIVELKAFFDLNSENSADSHR >Mature_382_residues PTSTALVLGGGGARAAYQVGVLKALVQLYPRNHGIPFKIICGTSAGAINGTSIATHASCFHLGVKKLEWVWRHFETRKVY RASITGVLGHLGKMALKGMQDDKVNTDAGSLLDNDPLRKLLNELIDFKRIDRNIRSGALTALSVDASCYNNSRSVSFFQA SRDIENWTRARRSGERMMLNTEHLLASSAIPMVFPSIKLNQAYYGDGSVHQLAPLSSPIHLGAEKLLVINLESPHKHFPM ELEYHPKTASIAGHLLDTIFSDTLNSDLERLERINNTLSLIPESSRNKLALHPIKTLVIKPSEDLSKIAARFYDDMPWAV KTLLGFIGIDRQSDSSIVSYLLFEKTYTSALIDLGYKDAMEQIVELKAFFDLNSENSADSHR
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42465; Mature: 42334
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSTALVLGGGGARAAYQVGVLKALVQLYPRNHGIPFKIICGTSAGAINGTSIATHASC CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHH FHLGVKKLEWVWRHFETRKVYRASITGVLGHLGKMALKGMQDDKVNTDAGSLLDNDPLRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LLNELIDFKRIDRNIRSGALTALSVDASCYNNSRSVSFFQASRDIENWTRARRSGERMML HHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEE NTEHLLASSAIPMVFPSIKLNQAYYGDGSVHQLAPLSSPIHLGAEKLLVINLESPHKHFP EHHHHHHHCCCCCEECCEEECCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC MELEYHPKTASIAGHLLDTIFSDTLNSDLERLERINNTLSLIPESSRNKLALHPIKTLVI EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCEEEECEEEEEE KPSEDLSKIAARFYDDMPWAVKTLLGFIGIDRQSDSSIVSYLLFEKTYTSALIDLGYKDA CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH MEQIVELKAFFDLNSENSADSHR HHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PTSTALVLGGGGARAAYQVGVLKALVQLYPRNHGIPFKIICGTSAGAINGTSIATHASC CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHH FHLGVKKLEWVWRHFETRKVYRASITGVLGHLGKMALKGMQDDKVNTDAGSLLDNDPLRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH LLNELIDFKRIDRNIRSGALTALSVDASCYNNSRSVSFFQASRDIENWTRARRSGERMML HHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEE NTEHLLASSAIPMVFPSIKLNQAYYGDGSVHQLAPLSSPIHLGAEKLLVINLESPHKHFP EHHHHHHHCCCCCEECCEEECCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC MELEYHPKTASIAGHLLDTIFSDTLNSDLERLERINNTLSLIPESSRNKLALHPIKTLVI EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCEEEECEEEEEE KPSEDLSKIAARFYDDMPWAVKTLLGFIGIDRQSDSSIVSYLLFEKTYTSALIDLGYKDA CCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH MEQIVELKAFFDLNSENSADSHR HHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA