| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yhaR [H]
Identifier: 160876085
GI number: 160876085
Start: 3533836
End: 3534705
Strand: Direct
Name: yhaR [H]
Synonym: Sbal195_2975
Alternate gene names: 160876085
Gene position: 3533836-3534705 (Clockwise)
Preceding gene: 160876084
Following gene: 160876086
Centisome position: 66.09
GC content: 49.89
Gene sequence:
>870_bases ATGACCAACAGATTAAACAGCACTAGCGGCACAAAGGATTTAAGCAACTTGCAGCACGTCACTTACGCACTCAATAACGG CGTTGCTGAGCTTATTCTTGACCGAGCAGAAGTACACAACGCCTTCGATGAAGTGATGATTAGCGAGATGATTAGCGTCC TTAGCTATTTTGCTGAGCACAAGCAATGCCAAGTGCTGGTACTCAAAGCGAACGGCAAAAACTTCAGCGCCGGCGCCGAT CTCAATTGGATGCGCAAGCAAGCCAAAATGGACTTTGAGCAAAATCTAAATGATGCCAAAGCCTTAGCAAAACTGATGCA GGATTTAGATACCTTTCCAAAACCCACCATTGCATTAGTGCAAGGCGCAGCCTTTGGCGGTGCACTGGGGCTGATTTGCG CCAGCGATATCGCTATCGCCACGACGCGCGCCAGTTTTTGCTTGAGCGAAGTGAAACTCGGATTAATTCCTGCGGTGATA AGCCCTTACGTTGCCCGCGCTATGGGTAACCGCGCATCGCGCCGCTACATGTTAACGGCTGAGCGTTTTAGTGCAGACAC TGCATTAAAGCTTAATGTCATTCATGAGATCAGCGATGACTTAGACGCCGCCGCAAAGCCTATGATTGACGCGCTACTGG CCAATAGTCCGCAAGGCATGGCGTGGGTAAAAACACTGCTGTCGCATCTTGAAGATGGCGTGATAGACCAAAACACCATT GATTACACTAGCGAGCGTATCGCCCGCATTCGGGTATCAACCGAGGGCCAAGAAGGCTTAAACGCCTTTTTTGAGAAACG TCTGCCTAACTGGCAACAAGCGCTCTCAACTCCCACGCAAAAGCCAAGTGATACCCAAGGAGCCCTTTGA
Upstream 100 bases:
>100_bases GCGTTAAACGCCCCTATCGAAGACACCCGCTTTGGTGTGTTCCGTATGTAAAGGCACATGTGAAAAACATATGCCACACA ATAAGATAGGGGAAAGAATA
Downstream 100 bases:
>100_bases TGTTAACCAAGCAAATGTTTACCAAGCTATTGATTGCTAACCGCGGTGAAATCGCCTGTCGCATCATCAAAACCGCCCAT GCCATGGGTGTTCGCACCGT
Product: enoyl-CoA hydratase/isomerase
Products: trans-2-enoyl-CoA; trans-3-enoyl-CoA; H2O
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTNRLNSTSGTKDLSNLQHVTYALNNGVAELILDRAEVHNAFDEVMISEMISVLSYFAEHKQCQVLVLKANGKNFSAGAD LNWMRKQAKMDFEQNLNDAKALAKLMQDLDTFPKPTIALVQGAAFGGALGLICASDIAIATTRASFCLSEVKLGLIPAVI SPYVARAMGNRASRRYMLTAERFSADTALKLNVIHEISDDLDAAAKPMIDALLANSPQGMAWVKTLLSHLEDGVIDQNTI DYTSERIARIRVSTEGQEGLNAFFEKRLPNWQQALSTPTQKPSDTQGAL
Sequences:
>Translated_289_residues MTNRLNSTSGTKDLSNLQHVTYALNNGVAELILDRAEVHNAFDEVMISEMISVLSYFAEHKQCQVLVLKANGKNFSAGAD LNWMRKQAKMDFEQNLNDAKALAKLMQDLDTFPKPTIALVQGAAFGGALGLICASDIAIATTRASFCLSEVKLGLIPAVI SPYVARAMGNRASRRYMLTAERFSADTALKLNVIHEISDDLDAAAKPMIDALLANSPQGMAWVKTLLSHLEDGVIDQNTI DYTSERIARIRVSTEGQEGLNAFFEKRLPNWQQALSTPTQKPSDTQGAL >Mature_288_residues TNRLNSTSGTKDLSNLQHVTYALNNGVAELILDRAEVHNAFDEVMISEMISVLSYFAEHKQCQVLVLKANGKNFSAGADL NWMRKQAKMDFEQNLNDAKALAKLMQDLDTFPKPTIALVQGAAFGGALGLICASDIAIATTRASFCLSEVKLGLIPAVIS PYVARAMGNRASRRYMLTAERFSADTALKLNVIHEISDDLDAAAKPMIDALLANSPQGMAWVKTLLSHLEDGVIDQNTID YTSERIARIRVSTEGQEGLNAFFEKRLPNWQQALSTPTQKPSDTQGAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=252, Percent_Identity=25.3968253968254, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI194097323, Length=256, Percent_Identity=29.296875, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI70995211, Length=191, Percent_Identity=27.2251308900524, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI87082183, Length=262, Percent_Identity=27.0992366412214, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787659, Length=245, Percent_Identity=27.3469387755102, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788597, Length=261, Percent_Identity=25.6704980842912, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI221142681, Length=275, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1787660, Length=272, Percent_Identity=28.3088235294118, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790281, Length=175, Percent_Identity=27.4285714285714, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17535521, Length=261, Percent_Identity=26.4367816091954, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17540714, Length=180, Percent_Identity=29.4444444444444, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17534483, Length=233, Percent_Identity=25.3218884120172, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=26, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17536985, Length=222, Percent_Identity=25.6756756756757, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17549921, Length=221, Percent_Identity=27.1493212669683, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24653139, Length=266, Percent_Identity=27.4436090225564, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI19920382, Length=182, Percent_Identity=29.1208791208791, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI20129971, Length=269, Percent_Identity=25.2788104089219, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24653477, Length=269, Percent_Identity=25.2788104089219, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922422, Length=253, Percent_Identity=22.1343873517787, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: 4.2.1.17
Molecular weight: Translated: 31589; Mature: 31458
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRLNSTSGTKDLSNLQHVTYALNNGVAELILDRAEVHNAFDEVMISEMISVLSYFAEH CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KQCQVLVLKANGKNFSAGADLNWMRKQAKMDFEQNLNDAKALAKLMQDLDTFPKPTIALV CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHH QGAAFGGALGLICASDIAIATTRASFCLSEVKLGLIPAVISPYVARAMGNRASRRYMLTA HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEH ERFSADTALKLNVIHEISDDLDAAAKPMIDALLANSPQGMAWVKTLLSHLEDGVIDQNTI HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCH DYTSERIARIRVSTEGQEGLNAFFEKRLPNWQQALSTPTQKPSDTQGAL HHHHHHHHHEEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TNRLNSTSGTKDLSNLQHVTYALNNGVAELILDRAEVHNAFDEVMISEMISVLSYFAEH CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KQCQVLVLKANGKNFSAGADLNWMRKQAKMDFEQNLNDAKALAKLMQDLDTFPKPTIALV CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHH QGAAFGGALGLICASDIAIATTRASFCLSEVKLGLIPAVISPYVARAMGNRASRRYMLTA HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEH ERFSADTALKLNVIHEISDDLDAAAKPMIDALLANSPQGMAWVKTLLSHLEDGVIDQNTI HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCH DYTSERIARIRVSTEGQEGLNAFFEKRLPNWQQALSTPTQKPSDTQGAL HHHHHHHHHEEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (3S)-3-hydroxyacyl-CoA
Specific reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377; 9579061 [H]