| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876052
Identifier: 160876052
GI number: 160876052
Start: 3489964
End: 3491490
Strand: Direct
Name: 160876052
Synonym: Sbal195_2942
Alternate gene names: NA
Gene position: 3489964-3491490 (Clockwise)
Preceding gene: 160876051
Following gene: 160876056
Centisome position: 65.27
GC content: 35.1
Gene sequence:
>1527_bases ATGAATAAAGCGGACATAGATGTTTTTATTGAGATGCTTATTTCTAACAAAGTTAACGAGGTTGTTAGATTAGGTAAAGC GATGACACAACCATTATCACTTACAGCAAACAGTTATTTTGAACAATGGTTCAATGAGACAAGCACTCAACGCGATAATC AATACAATTACGACTCAACGGATTGGGGTTACTTGAATATAACGCCTCCACCTTACCCAGAATACCCTAGCTATGCGAAT TGGTTATCATCTCGCTTAGACAGAGTTGCAGCATATCAACCAGATTATCAAGCGTTTACCTCTTATGATGTAGATAATGA CGATGTTGCTGTTGACACTGAGCATCCCCATTATGATGACTTACAACATCCGACTATTCATCAAGCTAAATACGATTATC TAAATGCACAGGTAACTAAATTCACAAATAACATAAATAAAGCACATAGAGAAGATAACCCAATTCAGTTAAGAATAACG CTGAACGAATTAACAGAAAGATTTACAGACTTGTTACCCAATACCCCACCCTTAGTACAAACACCTTCGGATAACAACAA GTTAGGTACTCTATTATTTAAAGATGTTGTTGAAAAATATATAGAATACGCTGAGAATAAAATGCCAAAGAGGCAACTAG CAGACCCTAAGAGACATATGAAATTATGGTTACAGGACTTTGCAGACACGCCAATTGATAATGTTAATCTTGGAGATATT CTTGATGCGTGGGAGACAATTAAGAGCTTTCCTAAAAATACTAAAAGTGAATCAATCGAATCCGTTTGGGAACTGACAAA AACATGTGATGTCTCGGGGCAACCAATGACATTTCAGAATGCCAAAAAGTATAAACAAGAATTAAGGAAATTCTTTACTT GGGCTTGTGATTTACAACATCTCACAACGAACAATCCTATCGCTACTGATAATGCATATAAATTATTGATAGACGATAAA AATAAACAAACCCCAAGAACGAAATTCAACAATAATCAAGCATTAAGGATTATAAATCACTGTAAAAACAATCTAAAAAG TCCATTTAGTTGGGCAGTTTTATTAATGGCATATCATGGCATGCGTAATAGTGAAGTAACAAGTTTAACTAAAAGTGATA TTGTTACCGACCCTGATAGCCAAATATGCTACATCAACATAAAAAATGGTAAAACTGTAAACGCTAAACGTAAAGTCCCA ATCCATAATGAGATTATAAAATTAGGATTTATTGAATACGTACAACAATTTGAATTCCTGATATTCAATTTTGGCTCTAC CAAACTAACAAGTTACTACTCCCATGAACTCAGACCGTTACTCAACATCCCTGAGCTTGCTGAAGATGGCTCACGTTTAT CACTATATTCATTTAGACATGCAGTTATTTCAAAGTTAACTGCCGCAGGTTCTAATAGAGGTATTCAAAATGCAATTGTA GGGCATGCTCAAAGCGAGACACAAGCAGGATATACGCATCTTGACCTTCATCTACTACAAACATACGTGAATAAAGTTGA TTACTGA
Upstream 100 bases:
>100_bases ATATAGAAAGTCACTTAAGACTGATTCACCTAGCCTATGTCGCAGGTATTTATCTGCTATCATGCCACACATTAGTAATT GTAAACGCTTAGGAAAGGGA
Downstream 100 bases:
>100_bases ATTTGAATCACTTAGATGCACTAATTATGTCTAATTTAACTCATCAAAAATAGCAAAGGCATAATATCACCAGATATTAA CTTTACACACATAGTAAACA
Product: integrase family protein
Products: NA
Alternate protein names: Phage Integrase; Phage Integrase Family Site Specific Recombinase; Phage Integrase Family Protein; Integrase; Prolidase (Xaa-Pro Dipeptidase
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MNKADIDVFIEMLISNKVNEVVRLGKAMTQPLSLTANSYFEQWFNETSTQRDNQYNYDSTDWGYLNITPPPYPEYPSYAN WLSSRLDRVAAYQPDYQAFTSYDVDNDDVAVDTEHPHYDDLQHPTIHQAKYDYLNAQVTKFTNNINKAHREDNPIQLRIT LNELTERFTDLLPNTPPLVQTPSDNNKLGTLLFKDVVEKYIEYAENKMPKRQLADPKRHMKLWLQDFADTPIDNVNLGDI LDAWETIKSFPKNTKSESIESVWELTKTCDVSGQPMTFQNAKKYKQELRKFFTWACDLQHLTTNNPIATDNAYKLLIDDK NKQTPRTKFNNNQALRIINHCKNNLKSPFSWAVLLMAYHGMRNSEVTSLTKSDIVTDPDSQICYINIKNGKTVNAKRKVP IHNEIIKLGFIEYVQQFEFLIFNFGSTKLTSYYSHELRPLLNIPELAEDGSRLSLYSFRHAVISKLTAAGSNRGIQNAIV GHAQSETQAGYTHLDLHLLQTYVNKVDY
Sequences:
>Translated_508_residues MNKADIDVFIEMLISNKVNEVVRLGKAMTQPLSLTANSYFEQWFNETSTQRDNQYNYDSTDWGYLNITPPPYPEYPSYAN WLSSRLDRVAAYQPDYQAFTSYDVDNDDVAVDTEHPHYDDLQHPTIHQAKYDYLNAQVTKFTNNINKAHREDNPIQLRIT LNELTERFTDLLPNTPPLVQTPSDNNKLGTLLFKDVVEKYIEYAENKMPKRQLADPKRHMKLWLQDFADTPIDNVNLGDI LDAWETIKSFPKNTKSESIESVWELTKTCDVSGQPMTFQNAKKYKQELRKFFTWACDLQHLTTNNPIATDNAYKLLIDDK NKQTPRTKFNNNQALRIINHCKNNLKSPFSWAVLLMAYHGMRNSEVTSLTKSDIVTDPDSQICYINIKNGKTVNAKRKVP IHNEIIKLGFIEYVQQFEFLIFNFGSTKLTSYYSHELRPLLNIPELAEDGSRLSLYSFRHAVISKLTAAGSNRGIQNAIV GHAQSETQAGYTHLDLHLLQTYVNKVDY >Mature_508_residues MNKADIDVFIEMLISNKVNEVVRLGKAMTQPLSLTANSYFEQWFNETSTQRDNQYNYDSTDWGYLNITPPPYPEYPSYAN WLSSRLDRVAAYQPDYQAFTSYDVDNDDVAVDTEHPHYDDLQHPTIHQAKYDYLNAQVTKFTNNINKAHREDNPIQLRIT LNELTERFTDLLPNTPPLVQTPSDNNKLGTLLFKDVVEKYIEYAENKMPKRQLADPKRHMKLWLQDFADTPIDNVNLGDI LDAWETIKSFPKNTKSESIESVWELTKTCDVSGQPMTFQNAKKYKQELRKFFTWACDLQHLTTNNPIATDNAYKLLIDDK NKQTPRTKFNNNQALRIINHCKNNLKSPFSWAVLLMAYHGMRNSEVTSLTKSDIVTDPDSQICYINIKNGKTVNAKRKVP IHNEIIKLGFIEYVQQFEFLIFNFGSTKLTSYYSHELRPLLNIPELAEDGSRLSLYSFRHAVISKLTAAGSNRGIQNAIV GHAQSETQAGYTHLDLHLLQTYVNKVDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58679; Mature: 58679
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKADIDVFIEMLISNKVNEVVRLGKAMTQPLSLTANSYFEQWFNETSTQRDNQYNYDST CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DWGYLNITPPPYPEYPSYANWLSSRLDRVAAYQPDYQAFTSYDVDNDDVAVDTEHPHYDD CCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCCCCCCCC LQHPTIHQAKYDYLNAQVTKFTNNINKAHREDNPIQLRITLNELTERFTDLLPNTPPLVQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCEE TPSDNNKLGTLLFKDVVEKYIEYAENKMPKRQLADPKRHMKLWLQDFADTPIDNVNLGDI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHH LDAWETIKSFPKNTKSESIESVWELTKTCDVSGQPMTFQNAKKYKQELRKFFTWACDLQH HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTTNNPIATDNAYKLLIDDKNKQTPRTKFNNNQALRIINHCKNNLKSPFSWAVLLMAYHG HCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC MRNSEVTSLTKSDIVTDPDSQICYINIKNGKTVNAKRKVPIHNEIIKLGFIEYVQQFEFL CCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHH IFNFGSTKLTSYYSHELRPLLNIPELAEDGSRLSLYSFRHAVISKLTAAGSNRGIQNAIV EEECCCHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHH GHAQSETQAGYTHLDLHLLQTYVNKVDY CCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKADIDVFIEMLISNKVNEVVRLGKAMTQPLSLTANSYFEQWFNETSTQRDNQYNYDST CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DWGYLNITPPPYPEYPSYANWLSSRLDRVAAYQPDYQAFTSYDVDNDDVAVDTEHPHYDD CCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCCCCCCCC LQHPTIHQAKYDYLNAQVTKFTNNINKAHREDNPIQLRITLNELTERFTDLLPNTPPLVQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCEE TPSDNNKLGTLLFKDVVEKYIEYAENKMPKRQLADPKRHMKLWLQDFADTPIDNVNLGDI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHH LDAWETIKSFPKNTKSESIESVWELTKTCDVSGQPMTFQNAKKYKQELRKFFTWACDLQH HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTTNNPIATDNAYKLLIDDKNKQTPRTKFNNNQALRIINHCKNNLKSPFSWAVLLMAYHG HCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC MRNSEVTSLTKSDIVTDPDSQICYINIKNGKTVNAKRKVPIHNEIIKLGFIEYVQQFEFL CCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHH IFNFGSTKLTSYYSHELRPLLNIPELAEDGSRLSLYSFRHAVISKLTAAGSNRGIQNAIV EEECCCHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHH GHAQSETQAGYTHLDLHLLQTYVNKVDY CCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA