| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876032
Identifier: 160876032
GI number: 160876032
Start: 3469988
End: 3470227
Strand: Reverse
Name: 160876032
Synonym: Sbal195_2922
Alternate gene names: NA
Gene position: 3470227-3469988 (Counterclockwise)
Preceding gene: 160876033
Following gene: 160876031
Centisome position: 64.9
GC content: 53.33
Gene sequence:
>240_bases ATGAGCCCGTCGCATTCAAATCAGCGCCAAAGCATTGCCGAACTGAGCTCAGCACTGCGGCCTGTTTTTAATGGTCGCCA CCCAGCAGGTTTGCGCAGTGACGGTTTGCCTTATGCCAGCCGCTGCAAAGTGAGCGATGCAAAACGTGCAGAACGCGCGC GGACTCGCCGCATTGAAGATATGGCGTTAGCCAAAGAACTGGGCATTAGCATAGAAGAATTACAGGATGGTGCTCTATGA
Upstream 100 bases:
>100_bases GCAAGGTAAAGGTCGTTGCCATTAATGGTAAGTCTGTTTCTAAACAATCGATGTGGGATTTAGTGCTGTTCAAACGGCCA TTGCCGCAGGGAGTGCACGC
Downstream 100 bases:
>100_bases ATGGTCATCAAGCCGTCATTGAATTTAGTCGTCCCACTCACTCTAAAAATGGTGGCTGAGTCATGGCTAGAAAGTCCCAT TTGTTTGCGCATTTACTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSPSHSNQRQSIAELSSALRPVFNGRHPAGLRSDGLPYASRCKVSDAKRAERARTRRIEDMALAKELGISIEELQDGAL
Sequences:
>Translated_79_residues MSPSHSNQRQSIAELSSALRPVFNGRHPAGLRSDGLPYASRCKVSDAKRAERARTRRIEDMALAKELGISIEELQDGAL >Mature_78_residues SPSHSNQRQSIAELSSALRPVFNGRHPAGLRSDGLPYASRCKVSDAKRAERARTRRIEDMALAKELGISIEELQDGAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8675; Mature: 8544
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSHSNQRQSIAELSSALRPVFNGRHPAGLRSDGLPYASRCKVSDAKRAERARTRRIED CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHH MALAKELGISIEELQDGAL HHHHHHHCCCHHHHCCCCC >Mature Secondary Structure SPSHSNQRQSIAELSSALRPVFNGRHPAGLRSDGLPYASRCKVSDAKRAERARTRRIED CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHH MALAKELGISIEELQDGAL HHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA