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The map label for this gene is 160875952

Identifier: 160875952

GI number: 160875952

Start: 3385876

End: 3386640

Strand: Reverse

Name: 160875952

Synonym: Sbal195_2842

Alternate gene names: NA

Gene position: 3386640-3385876 (Counterclockwise)

Preceding gene: 160875953

Following gene: 160875950

Centisome position: 63.33

GC content: 51.24

Gene sequence:

>765_bases
ATGTTGCCTAGCGTTATGCCTATGACTGACAACGAGCAAGTGACTAATACTGCAGTGACTAGTACCGAAGTAACGAGTAC
AGAAATGCCGAGTGCTGAATTTGCCTGTGAGCAAACGCTCGATGCCAGCGCAGTATTTATCGGTTTAGTGAATCCTAAAA
CGCCCGTTAACGTCGGCGGTATTATGCGCGCATCGGGTTGTTATGGTGTCGATGGGGTATTTTATACCGGCAGGCGCTAC
GAGTTAGCCGCGCGTTCGGGTGCTGTGCAATACCATGTCGATACTAAGGATGCAGGAGAGCGCATTCCGCTCACGGGCGT
GACTTCATTACTCGCCTCGATTCCGGCGGACACTAAGCTTATCTGTGTGGATTTGGTAGTTGGCGCGACGCCGCTGCCGG
ATTTTGTCCATCCCGCGAAAGCCTTTTATGTGTTTGGTCCTGAAGATGGCACCATTGGCCAAGAGATTATCGATAAAGCC
GATGCCGTAGTGTATGTGCCTACGGTCGGTTGTATGAATCTTGCTGCGTCGGTCAATGTGTTGTTATACGACAGATTGGC
GAAATCTCACCGTGAGGCTGCAAGCCTAGCATCGAACATAAGCGGTGATGAGCTGATCCGCCAGAGTCGCGATAACAACA
ATCGTACTCGGGTAAAAGTGCCCAGAGCGCCGCGAAAACCTCGACATGTTGGAGCTAGCAGTCTTGAGTCTAGCAGCCTT
GAACCTAGCCGCAGTGATAACGCGATAGTCATTACAGCCGCTTAA

Upstream 100 bases:

>100_bases
GACTGTTTAGCGCTTGCGCGCCAAGAATTAAATGATGCAGATTATGCCTTGGTTGAACAGGCATGGGCACAGCTGCATGC
ATGGATTGTAGGCGAATTTG

Downstream 100 bases:

>100_bases
GTGGTTTACAGAAAACATTTAAAAAAGGGATTAAGCAGAGACTTAGTCCCTTTTTTATAGCGCTCAAAAACGTTATTTTT
CTAGCGATTGATTACCTAGA

Product: tRNA/rRNA methyltransferase SpoU

Products: NA

Alternate protein names: RNA Methyltransferase; 23S RRNA Methyltransferase; Cold-Shock RNA Methyltransferase; rRNA Methylase; TrmH Family RNA Methyltransferase; TRNA/RRNA MethyltransferaU; rRNA Methyltransferase; RNA Methyltransferase TrmH Family; SpoU Class RRNA Methylase

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLPSVMPMTDNEQVTNTAVTSTEVTSTEMPSAEFACEQTLDASAVFIGLVNPKTPVNVGGIMRASGCYGVDGVFYTGRRY
ELAARSGAVQYHVDTKDAGERIPLTGVTSLLASIPADTKLICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKA
DAVVYVPTVGCMNLAASVNVLLYDRLAKSHREAASLASNISGDELIRQSRDNNNRTRVKVPRAPRKPRHVGASSLESSSL
EPSRSDNAIVITAA

Sequences:

>Translated_254_residues
MLPSVMPMTDNEQVTNTAVTSTEVTSTEMPSAEFACEQTLDASAVFIGLVNPKTPVNVGGIMRASGCYGVDGVFYTGRRY
ELAARSGAVQYHVDTKDAGERIPLTGVTSLLASIPADTKLICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKA
DAVVYVPTVGCMNLAASVNVLLYDRLAKSHREAASLASNISGDELIRQSRDNNNRTRVKVPRAPRKPRHVGASSLESSSL
EPSRSDNAIVITAA
>Mature_254_residues
MLPSVMPMTDNEQVTNTAVTSTEVTSTEMPSAEFACEQTLDASAVFIGLVNPKTPVNVGGIMRASGCYGVDGVFYTGRRY
ELAARSGAVQYHVDTKDAGERIPLTGVTSLLASIPADTKLICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKA
DAVVYVPTVGCMNLAASVNVLLYDRLAKSHREAASLASNISGDELIRQSRDNNNRTRVKVPRAPRKPRHVGASSLESSSL
EPSRSDNAIVITAA

Specific function: Unknown

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26982; Mature: 26982

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSVMPMTDNEQVTNTAVTSTEVTSTEMPSAEFACEQTLDASAVFIGLVNPKTPVNVGG
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCC
IMRASGCYGVDGVFYTGRRYELAARSGAVQYHVDTKDAGERIPLTGVTSLLASIPADTKL
EEECCCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
ICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKADAVVYVPTVGCMNLAASVNV
EEEEEEECCCCCCHHCCCCEEEEEECCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHH
LLYDRLAKSHREAASLASNISGDELIRQSRDNNNRTRVKVPRAPRKPRHVGASSLESSSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
EPSRSDNAIVITAA
CCCCCCCEEEEEEC
>Mature Secondary Structure
MLPSVMPMTDNEQVTNTAVTSTEVTSTEMPSAEFACEQTLDASAVFIGLVNPKTPVNVGG
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCC
IMRASGCYGVDGVFYTGRRYELAARSGAVQYHVDTKDAGERIPLTGVTSLLASIPADTKL
EEECCCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
ICVDLVVGATPLPDFVHPAKAFYVFGPEDGTIGQEIIDKADAVVYVPTVGCMNLAASVNV
EEEEEEECCCCCCHHCCCCEEEEEECCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHH
LLYDRLAKSHREAASLASNISGDELIRQSRDNNNRTRVKVPRAPRKPRHVGASSLESSSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
EPSRSDNAIVITAA
CCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA