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The map label for this gene is ycdZ [H]

Identifier: 160875932

GI number: 160875932

Start: 3358278

End: 3358769

Strand: Reverse

Name: ycdZ [H]

Synonym: Sbal195_2821

Alternate gene names: 160875932

Gene position: 3358769-3358278 (Counterclockwise)

Preceding gene: 160875933

Following gene: 160875931

Centisome position: 62.81

GC content: 49.19

Gene sequence:

>492_bases
ATGGAAAATCGTTGGCAAGTCGCTATTTCTGCCGGCCTATTGGCGGCTATTTGGTGTGGCGTCGCAGATGCCTTTCATCT
GGTCACTTGGATTGGCTTTTTAGGTTGCAGCACTTTTTTCGCTCAACCCAAGGCTGGTTTTCAAGGCGTGATGATGGCGT
GGTGCACGAATCTGTCCGGTGTGTTTTGGGCTTGGCTCATTATCTCGGGTAGCAGCTTTTTTATTTCGCCCGTATTTGGG
TATATTTTTACCGGCATAGCCACTTCGGCCATGTGTTTACAGGCAAGTTATCAAAAGCTTAGCTTTATTCCCGGCGCATT
TATTGGCTGTTGCACTACCTTTGCTATGGCGGGTGATGTGGCCAATGTCGTGCCGTCGTTGATCATTGGTGGCTTATTAG
GTTTTAGTATGAGTCTGTTAACGGGGCAGTTGGTTAGCTTGACACAAAAGTGGTCTGCCGCCACGCGCAGTCAAGTGGCT
AGCGCGGATTAG

Upstream 100 bases:

>100_bases
AATGCCGAAAATTAGCAATAGATCAGGTTTTTGTTACCAGAATAGAGGTAATTTAACTAACAGATAAACTTCCGTGAATA
GAATTATAAAGGGGTCATCC

Downstream 100 bases:

>100_bases
CATAATACCTGCTCAGATCTTATTACTGACATAGCTGTCGAAGCGATCTGGGCTATAATGTTGATTTAGTGCCAAATAGC
ATTTTGTTCTTAGGAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSGVFWAWLIISGSSFFISPVFG
YIFTGIATSAMCLQASYQKLSFIPGAFIGCCTTFAMAGDVANVVPSLIIGGLLGFSMSLLTGQLVSLTQKWSAATRSQVA
SAD

Sequences:

>Translated_163_residues
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSGVFWAWLIISGSSFFISPVFG
YIFTGIATSAMCLQASYQKLSFIPGAFIGCCTTFAMAGDVANVVPSLIIGGLLGFSMSLLTGQLVSLTQKWSAATRSQVA
SAD
>Mature_163_residues
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSGVFWAWLIISGSSFFISPVFG
YIFTGIATSAMCLQASYQKLSFIPGAFIGCCTTFAMAGDVANVVPSLIIGGLLGFSMSLLTGQLVSLTQKWSAATRSQVA
SAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahC [H]

Homologues:

Organism=Escherichia coli, GI87081825, Length=135, Percent_Identity=45.9259259259259, Blast_Score=112, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 17278; Mature: 17278

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
VFWAWLIISGSSFFISPVFGYIFTGIATSAMCLQASYQKLSFIPGAFIGCCTTFAMAGDV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ANVVPSLIIGGLLGFSMSLLTGQLVSLTQKWSAATRSQVASAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MENRWQVAISAGLLAAIWCGVADAFHLVTWIGFLGCSTFFAQPKAGFQGVMMAWCTNLSG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
VFWAWLIISGSSFFISPVFGYIFTGIATSAMCLQASYQKLSFIPGAFIGCCTTFAMAGDV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ANVVPSLIIGGLLGFSMSLLTGQLVSLTQKWSAATRSQVASAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9457880 [H]