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The map label for this gene is mcp4 [H]

Identifier: 160875931

GI number: 160875931

Start: 3356719

End: 3358173

Strand: Reverse

Name: mcp4 [H]

Synonym: Sbal195_2820

Alternate gene names: 160875931

Gene position: 3358173-3356719 (Counterclockwise)

Preceding gene: 160875932

Following gene: 160875930

Centisome position: 62.8

GC content: 50.45

Gene sequence:

>1455_bases
ATGAAACAAATCCAGTTTCGCACCATTGATGCCATATTGATCAAGTTCAGTCTCAACGGAAAGTTTTGGGTAGTGTGTTC
TATGGTGGCGTTGATCACGGCCGCCGTGGCGCTCGTCAACTATCAACACGCGCACCGAAACGTCGAGCAAGCTTCTATTG
CCCGCGTTCAAGCGAGCGTCGATACCTTAGCGCAAGTTGCCACGGCGCAAAAGCTAGAAGCTGATGCTCTGTCACAATTT
GCCAGTCAATACGGTTTAACCGTGACCTCAAGGCAAAGTGAAGCGCAGCGTCAAGGGGATAAAGTGACGGCCAGCGCCAG
CGTGTCAGGCATGCAAGCCTTACAACTGACGCAGAATGTTCATGAGTGGGAAGCCGATGCGCGTAGCGATGCTAACTTTA
TGTTCTGGTTAGCATTAGTGGGCTTGTTGCCCTTATTCCAACTGAGTTACTGGATTTCGACCTCACTCGGCGGTGGCTTG
TGGGATATGTACTTAGCCATCAAACGCTTAGCTGATGGTGATTTGAGCTTTAGATTAAACTTCTTTGGCACTGACGATTT
CAGTTTGATTGCCCGTGAAATCGACCGCTGCGCCGATAACATGAGTGAAATGGTGTCGGCCATTGGTAAAAATGCACAAA
CCTTGTCATTAGCATCCGATGAATTTAATCAACAGGCGGCCACCAGTGATGAGCTGATAGGTTTCCAACATCAATTCCTC
GATTCCGTTGCTGTGGCGATGGCGCAAATGACTTCAGCGATTGAAGAAGTCTCTATCAACGCGAGCAACACTTCGCTGCA
GACTAAAGAAAACTCAACCCAAATGTCGGCCAGTCGTGGGCGCATTAGCCACACAGTGGACAGCATTGGCTTACTCTCGA
CTAAGATTGGCGCAGCGTTTTCATCGGTTGAACAATTGTCTAAGGATGCGGCGAGTATCGATGCCGTGGTCACGACGATT
AACAGTATTTCGCAGCAAACCAATTTGTTAGCCTTAAATGCGGCCATTGAAGCGGCACGTGCCGGTGAGCAGGGGCGTGG
CTTTGCCGTGGTGGCAGACGAAGTGCGTACCTTAGCGGGTCGAACTCAACAGGCCACGGTAGAAATTCAGTCTATGATTG
AAGGCTTACAGTCTGGCACGAGTCGTTTATCTAGCATTACCATGGAGATAGTCGATCAGGCAGATGAAGGCCGCAGCGCG
ATTATCGCCGTCGGTGACGATGTTCAAGGTATGGCGCAATCGGTGAATGCAGTATTTGATATGAGCAGCCAAATTGCCGC
CTCGGCGGAAGAGCAGAGTGTCGCCGCGCGCGACATTGCCGGACAATTGAATGAAATCCGCCATCAGTCGGAAACCATCA
AACAAACGGCCCAGCGCAGTGTGACCTTAGCCAATGATCTGCACCATGCCTCGGTCGAGTTAGATGGCATTTTAAAGCAG
TACCGCACGAGTTAA

Upstream 100 bases:

>100_bases
ATACCTGCTCAGATCTTATTACTGACATAGCTGTCGAAGCGATCTGGGCTATAATGTTGATTTAGTGCCAAATAGCATTT
TGTTCTTAGGAATTATCAAG

Downstream 100 bases:

>100_bases
TATGTCACCTTTAATGTGAGTCGTCAGCATTGCCAGTTTTCAGTGTGGGTAGTTGAGCAATAACGCCCAATACTGAGTCT
TATATTAAGCATTAGCGTAT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNVEQASIARVQASVDTLAQVATAQKLEADALSQF
ASQYGLTVTSRQSEAQRQGDKVTASASVSGMQALQLTQNVHEWEADARSDANFMFWLALVGLLPLFQLSYWISTSLGGGL
WDMYLAIKRLADGDLSFRLNFFGTDDFSLIAREIDRCADNMSEMVSAIGKNAQTLSLASDEFNQQAATSDELIGFQHQFL
DSVAVAMAQMTSAIEEVSINASNTSLQTKENSTQMSASRGRISHTVDSIGLLSTKIGAAFSSVEQLSKDAASIDAVVTTI
NSISQQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQQATVEIQSMIEGLQSGTSRLSSITMEIVDQADEGRSA
IIAVGDDVQGMAQSVNAVFDMSSQIAASAEEQSVAARDIAGQLNEIRHQSETIKQTAQRSVTLANDLHHASVELDGILKQ
YRTS

Sequences:

>Translated_484_residues
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNVEQASIARVQASVDTLAQVATAQKLEADALSQF
ASQYGLTVTSRQSEAQRQGDKVTASASVSGMQALQLTQNVHEWEADARSDANFMFWLALVGLLPLFQLSYWISTSLGGGL
WDMYLAIKRLADGDLSFRLNFFGTDDFSLIAREIDRCADNMSEMVSAIGKNAQTLSLASDEFNQQAATSDELIGFQHQFL
DSVAVAMAQMTSAIEEVSINASNTSLQTKENSTQMSASRGRISHTVDSIGLLSTKIGAAFSSVEQLSKDAASIDAVVTTI
NSISQQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQQATVEIQSMIEGLQSGTSRLSSITMEIVDQADEGRSA
IIAVGDDVQGMAQSVNAVFDMSSQIAASAEEQSVAARDIAGQLNEIRHQSETIKQTAQRSVTLANDLHHASVELDGILKQ
YRTS
>Mature_484_residues
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNVEQASIARVQASVDTLAQVATAQKLEADALSQF
ASQYGLTVTSRQSEAQRQGDKVTASASVSGMQALQLTQNVHEWEADARSDANFMFWLALVGLLPLFQLSYWISTSLGGGL
WDMYLAIKRLADGDLSFRLNFFGTDDFSLIAREIDRCADNMSEMVSAIGKNAQTLSLASDEFNQQAATSDELIGFQHQFL
DSVAVAMAQMTSAIEEVSINASNTSLQTKENSTQMSASRGRISHTVDSIGLLSTKIGAAFSSVEQLSKDAASIDAVVTTI
NSISQQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQQATVEIQSMIEGLQSGTSRLSSITMEIVDQADEGRSA
IIAVGDDVQGMAQSVNAVFDMSSQIAASAEEQSVAARDIAGQLNEIRHQSETIKQTAQRSVTLANDLHHASVELDGILKQ
YRTS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=337, Percent_Identity=31.4540059347181, Blast_Score=112, Evalue=7e-26,
Organism=Escherichia coli, GI2367378, Length=318, Percent_Identity=29.2452830188679, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1788195, Length=300, Percent_Identity=27.6666666666667, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788194, Length=367, Percent_Identity=28.3378746594005, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1789453, Length=306, Percent_Identity=26.797385620915, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 52090; Mature: 52090

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNVEQASIARVQASV
CCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DTLAQVATAQKLEADALSQFASQYGLTVTSRQSEAQRQGDKVTASASVSGMQALQLTQNV
HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
HEWEADARSDANFMFWLALVGLLPLFQLSYWISTSLGGGLWDMYLAIKRLADGDLSFRLN
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEE
FFGTDDFSLIAREIDRCADNMSEMVSAIGKNAQTLSLASDEFNQQAATSDELIGFQHQFL
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHH
DSVAVAMAQMTSAIEEVSINASNTSLQTKENSTQMSASRGRISHTVDSIGLLSTKIGAAF
HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SSVEQLSKDAASIDAVVTTINSISQQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHC
RTQQATVEIQSMIEGLQSGTSRLSSITMEIVDQADEGRSAIIAVGDDVQGMAQSVNAVFD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
MSSQIAASAEEQSVAARDIAGQLNEIRHQSETIKQTAQRSVTLANDLHHASVELDGILKQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRTS
HCCC
>Mature Secondary Structure
MKQIQFRTIDAILIKFSLNGKFWVVCSMVALITAAVALVNYQHAHRNVEQASIARVQASV
CCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DTLAQVATAQKLEADALSQFASQYGLTVTSRQSEAQRQGDKVTASASVSGMQALQLTQNV
HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
HEWEADARSDANFMFWLALVGLLPLFQLSYWISTSLGGGLWDMYLAIKRLADGDLSFRLN
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEE
FFGTDDFSLIAREIDRCADNMSEMVSAIGKNAQTLSLASDEFNQQAATSDELIGFQHQFL
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHH
DSVAVAMAQMTSAIEEVSINASNTSLQTKENSTQMSASRGRISHTVDSIGLLSTKIGAAF
HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SSVEQLSKDAASIDAVVTTINSISQQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHC
RTQQATVEIQSMIEGLQSGTSRLSSITMEIVDQADEGRSAIIAVGDDVQGMAQSVNAVFD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH
MSSQIAASAEEQSVAARDIAGQLNEIRHQSETIKQTAQRSVTLANDLHHASVELDGILKQ
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRTS
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]