Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is trpD [H]

Identifier: 160875914

GI number: 160875914

Start: 3336608

End: 3337681

Strand: Direct

Name: trpD [H]

Synonym: Sbal195_2803

Alternate gene names: 160875914

Gene position: 3336608-3337681 (Clockwise)

Preceding gene: 160875913

Following gene: 160875915

Centisome position: 62.4

GC content: 49.81

Gene sequence:

>1074_bases
ATGAGTACCAACCCTATTCAGCCTTTACTCGACGTTTTATACCAAGGTAAAAGTTTAAGCCGCGAGCAAACCGCCGAACT
TTTTAGCGCGTTAATTCGCGGAGAAATGAGTGAAGCGGCAATGGCGGGAATGTTAGTTGCGCTGAAAATGCGCGGTGAGA
CCATTGATGAGATCAGCGGCGCCGCCGATGCCATGCGCGCCGCTGCCAAACCTTTTCCTTGCCCTGAGCGAAACAACAAT
CCGCTTCATAATGGCATAGTTGATATTGTTGGCACGGGTGGCGATGGCTTTAATACCATTAATATTTCCACCACAGCAGC
CTTTGTTGCCGCGGCGGCAGGCGCTAAGGTCGCCAAACACGGCAATCGTAGCGTGTCGAGTAAATCGGGTTCATCGGATC
TTTTGGCGCAATTTGGCATCGACTTAACTATGTCGCCAGAGACTGCCAGTCGTTGCCTCGACGCATTGAATCTGTGCTTT
TTGTTTGCGCCCCACTACCATGGCGGGGTAAAACATGCGGTGCCCGTAAGACAAGCACTGAAAACGCGCACTTTATTCAA
TGTGTTAGGGCCGCTAATTAACCCCGCACGACCTGAATTTATGTTACTTGGCGTGTATAGCCCTGAGTTAGTCTTACCGA
TAGCGAAAGTATTAAAGGCGCTTGGCACAAAACGCGCTATGGTAGTGCACGGCAGCGGTTTAGATGAAGTCGCGCTGCAC
GGCAACACCCAAGTTGCTGAGTTAAAAGACGGCGACATTATTGAGTATCAACTCACGCCCGCCGATTTAGGTGTGCCTTT
AGCGCAAATATCAGACTTAGAAGGTGGCGAACCCGCGCAGAATGCCTTGATTACCGAGGCGATTTTAAAAGGCAACGGTA
CTGAAGCACACGCCAATGCGGTCGCAATCAATGCCGGTTGTGCTTTATATGTCTGTGGAATTACTGATTCAGTCAAAGCC
GGAACCTTACTTGCTCTCGCTACCATTCAAAGCGGCAAAGCATTTGAGTTATTAAGCCAGCTCGCAAAAGTCAGCGGTGA
AGCCCATGTCAACGGTCAAGAAAGAGGAAGATAA

Upstream 100 bases:

>100_bases
TTCAGTTCCACCCTGAATCAATTCTGACGACGTTGGGCAGCACATTGCTCATTCAAACCTTAGCCTTTCTTACCCAAGAC
ATGACAACAGGAGTAACCGC

Downstream 100 bases:

>100_bases
GCGAATGTCTCAAGTAGAAGTGACTCCAACAGCAATGACTCAAGACCTGCGTACTCAGCCAGAGGCAGCCACAAACGCTA
TGCCAAAAAGTAATGTGTTA

Product: anthranilate phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSTNPIQPLLDVLYQGKSLSREQTAELFSALIRGEMSEAAMAGMLVALKMRGETIDEISGAADAMRAAAKPFPCPERNNN
PLHNGIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPETASRCLDALNLCF
LFAPHYHGGVKHAVPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALH
GNTQVAELKDGDIIEYQLTPADLGVPLAQISDLEGGEPAQNALITEAILKGNGTEAHANAVAINAGCALYVCGITDSVKA
GTLLALATIQSGKAFELLSQLAKVSGEAHVNGQERGR

Sequences:

>Translated_357_residues
MSTNPIQPLLDVLYQGKSLSREQTAELFSALIRGEMSEAAMAGMLVALKMRGETIDEISGAADAMRAAAKPFPCPERNNN
PLHNGIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPETASRCLDALNLCF
LFAPHYHGGVKHAVPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALH
GNTQVAELKDGDIIEYQLTPADLGVPLAQISDLEGGEPAQNALITEAILKGNGTEAHANAVAINAGCALYVCGITDSVKA
GTLLALATIQSGKAFELLSQLAKVSGEAHVNGQERGR
>Mature_356_residues
STNPIQPLLDVLYQGKSLSREQTAELFSALIRGEMSEAAMAGMLVALKMRGETIDEISGAADAMRAAAKPFPCPERNNNP
LHNGIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPETASRCLDALNLCFL
FAPHYHGGVKHAVPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALHG
NTQVAELKDGDIIEYQLTPADLGVPLAQISDLEGGEPAQNALITEAILKGNGTEAHANAVAINAGCALYVCGITDSVKAG
TLLALATIQSGKAFELLSQLAKVSGEAHVNGQERGR

Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787517, Length=339, Percent_Identity=53.9823008849557, Blast_Score=319, Evalue=2e-88,
Organism=Saccharomyces cerevisiae, GI6320561, Length=289, Percent_Identity=33.5640138408304, Blast_Score=125, Evalue=7e-30,

Paralogues:

None

Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005940
- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072 [H]

Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]

EC number: =2.4.2.18 [H]

Molecular weight: Translated: 37238; Mature: 37107

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNPIQPLLDVLYQGKSLSREQTAELFSALIRGEMSEAAMAGMLVALKMRGETIDEISG
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCC
AADAMRAAAKPFPCPERNNNPLHNGIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKH
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHCCHHHHC
GNRSVSSKSGSSDLLAQFGIDLTMSPETASRCLDALNLCFLFAPHYHGGVKHAVPVRQAL
CCCCCCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
KTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALH
HHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEC
GNTQVAELKDGDIIEYQLTPADLGVPLAQISDLEGGEPAQNALITEAILKGNGTEAHANA
CCCEEEECCCCCEEEEEECHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
VAINAGCALYVCGITDSVKAGTLLALATIQSGKAFELLSQLAKVSGEAHVNGQERGR
EEEECCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEECCCHHCCC
>Mature Secondary Structure 
STNPIQPLLDVLYQGKSLSREQTAELFSALIRGEMSEAAMAGMLVALKMRGETIDEISG
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCC
AADAMRAAAKPFPCPERNNNPLHNGIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKH
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHCCHHHHC
GNRSVSSKSGSSDLLAQFGIDLTMSPETASRCLDALNLCFLFAPHYHGGVKHAVPVRQAL
CCCCCCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
KTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALH
HHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEC
GNTQVAELKDGDIIEYQLTPADLGVPLAQISDLEGGEPAQNALITEAILKGNGTEAHANA
CCCEEEECCCCCEEEEEECHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCE
VAINAGCALYVCGITDSVKAGTLLALATIQSGKAFELLSQLAKVSGEAHVNGQERGR
EEEECCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA