| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yjcG [C]
Identifier: 160875863
GI number: 160875863
Start: 3272120
End: 3273856
Strand: Reverse
Name: yjcG [C]
Synonym: Sbal195_2752
Alternate gene names: 160875863
Gene position: 3273856-3272120 (Counterclockwise)
Preceding gene: 160875864
Following gene: 160875862
Centisome position: 61.22
GC content: 48.07
Gene sequence:
>1737_bases ATGGATGTTCAAACACTAACGTATATTATCGTAGGGCTCTCGTTTGCGCTCTACATTGGGATTGCAATCTGGACTCGAGC GGGTTCAACCAAAGAATTCTATGTTGCAGGTGGCGGTGTTCACCCTGTTGTTAACGGTATGGCGACGGCGGCGGACTGGA TGTCGGCGGCGTCGTTTATTTCATTAGCGGGTATTGTGTCTTTCGTCGGTTACGACGGTAGCGTGTACTTAATGGGCTGG ACGGGCGGTTACGTATTGTTGGCTCTGTGTATGGCGCCGTATTTACGTAAGTTTGGTAAGTTCACTGTGCCAGATTTCGT TGGTGAGCGTTATTACTCACAGGCCGCACGCACAGTGGCGGTTATCTGTGCCATCTTTATCTGTTTTACTTACATTGCAG GGCAAATGCGCGGTGTGGGCGTGGTGTTTTCGCGTTTCTTAGAAGTGGAAGTCGACACGGGCGTATATATCGGTATGGCG GTCGTGTTCTTCTACGCCGTACTCGGTGGTATGAAAGGGATTACTTACACTCAGGTTGCTCAGTACTGTGTATTGATTTT CGCATTCATGGTGCCAGCCATATTTTTATCTGTGATGATGACAGGCCACATTATTCCACAAGTGGGTTTCGGTGCTGAAT TGCTTGATGCAGCGGGTAATAATAGTGGTGTTTACTTGCTTGAAAAACTCAACAATGTGTCAACTGAACTTGGCTTTGCC CCTTACACCGACGGTTCTAAGAGCATGATTGATGTGTTCTGTATTACTGGCGCGTTAATGATGGGTACTGCGGGTTTACC CCACGTTATCGTGCGTTTCTTTACTGTACCTAAAGTGAAAGATGCGCGTATATCTGCAGGTTGGGCGTTAGTGTTCATCG GTATCATGTATACCACAGTGCCTGCGTTGTCAGCGTTCTCTCGTGTCAACATGATTGAAACCATTAACGGTCCTGACTCT AAAGGTGTGGCTTATGAGTCTGCGCCAAATTGGATCAAAAACTGGGAAAAAACCGGTTTGATCAAGTGGAACGACAAAAA CGGCGACGGCAAACTCTACTATGCAGCCGGCAAGATGGAAGATCCTGCTAGTAAAAACGAAATGAAGATCGATAACGACA TCATAGTATTAGCGACGCCAGAAATCGCCAACTTGCCAGCTTGGGTTATCGCCTTAGTTGCAGCGGGTGGTTTAGCGGCG GCCTTGTCAACTTCTGCGGGTTTGTTGTTGGTGATTTCAACCTCGGTTTCACACGATTTACTCAAGAAAAACTTGATGCC AGATATCTCCGATAAAAAAGAGCTGATGTTTGCTCGTTTGGCGGCGGGTGTGGGCATTGTGATTGCGGGTTACTTTGGGG TGAATCCACCAGGCTTTGTGGCTGCGGTGGTGGCGTTCGCCTTCGGGTTAGCAGCATCATCACTGTTCCCTGCGATCATC ATGGGTATCTTCTCTAAGACAATGAACAAAGAAGGCGCGATTGCCGGTATGTTAACGGGTCTACTGTTTACAGCCAGCTA TATCATCTACTTCAAGTTTGTTGACCCAACGGGTAACGTTGCCGCTAACTGGTTCCTCGGTATTTCACCAGAAGGTATCG GTATGGTGGGCATGTTAGTGAACTTCGGTGTGGCAGCGTTAGTGAGTCGTGTGACTACGGCAACGCCATTACATGTTCAG GAGATGGTCGAATCGATTCGTTTCCCTAAAGGTTCGGGTGAAGCGAGCGGTCACTAA
Upstream 100 bases:
>100_bases GATCTATGTATGTATTCGTTGCGCTTATTTTTGTCTATGCGGCAAAAGCCAACGCCTTAGATAAAAAATATAACGTACAA GAAGACTAAGGAGCGTTGAG
Downstream 100 bases:
>100_bases GCTCATCGCTTAATCATTGCATCAACATAAGAGAGCGCTTCGGCGCTCTTTTTCATTGCGCATTTGGAAAGTATTTTGCC CTGTAGTTGAATGAGTCTAT
Product: Na+/solute symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MDVQTLTYIIVGLSFALYIGIAIWTRAGSTKEFYVAGGGVHPVVNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGW TGGYVLLALCMAPYLRKFGKFTVPDFVGERYYSQAARTVAVICAIFICFTYIAGQMRGVGVVFSRFLEVEVDTGVYIGMA VVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFLSVMMTGHIIPQVGFGAELLDAAGNNSGVYLLEKLNNVSTELGFA PYTDGSKSMIDVFCITGALMMGTAGLPHVIVRFFTVPKVKDARISAGWALVFIGIMYTTVPALSAFSRVNMIETINGPDS KGVAYESAPNWIKNWEKTGLIKWNDKNGDGKLYYAAGKMEDPASKNEMKIDNDIIVLATPEIANLPAWVIALVAAGGLAA ALSTSAGLLLVISTSVSHDLLKKNLMPDISDKKELMFARLAAGVGIVIAGYFGVNPPGFVAAVVAFAFGLAASSLFPAII MGIFSKTMNKEGAIAGMLTGLLFTASYIIYFKFVDPTGNVAANWFLGISPEGIGMVGMLVNFGVAALVSRVTTATPLHVQ EMVESIRFPKGSGEASGH
Sequences:
>Translated_578_residues MDVQTLTYIIVGLSFALYIGIAIWTRAGSTKEFYVAGGGVHPVVNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGW TGGYVLLALCMAPYLRKFGKFTVPDFVGERYYSQAARTVAVICAIFICFTYIAGQMRGVGVVFSRFLEVEVDTGVYIGMA VVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFLSVMMTGHIIPQVGFGAELLDAAGNNSGVYLLEKLNNVSTELGFA PYTDGSKSMIDVFCITGALMMGTAGLPHVIVRFFTVPKVKDARISAGWALVFIGIMYTTVPALSAFSRVNMIETINGPDS KGVAYESAPNWIKNWEKTGLIKWNDKNGDGKLYYAAGKMEDPASKNEMKIDNDIIVLATPEIANLPAWVIALVAAGGLAA ALSTSAGLLLVISTSVSHDLLKKNLMPDISDKKELMFARLAAGVGIVIAGYFGVNPPGFVAAVVAFAFGLAASSLFPAII MGIFSKTMNKEGAIAGMLTGLLFTASYIIYFKFVDPTGNVAANWFLGISPEGIGMVGMLVNFGVAALVSRVTTATPLHVQ EMVESIRFPKGSGEASGH >Mature_578_residues MDVQTLTYIIVGLSFALYIGIAIWTRAGSTKEFYVAGGGVHPVVNGMATAADWMSAASFISLAGIVSFVGYDGSVYLMGW TGGYVLLALCMAPYLRKFGKFTVPDFVGERYYSQAARTVAVICAIFICFTYIAGQMRGVGVVFSRFLEVEVDTGVYIGMA VVFFYAVLGGMKGITYTQVAQYCVLIFAFMVPAIFLSVMMTGHIIPQVGFGAELLDAAGNNSGVYLLEKLNNVSTELGFA PYTDGSKSMIDVFCITGALMMGTAGLPHVIVRFFTVPKVKDARISAGWALVFIGIMYTTVPALSAFSRVNMIETINGPDS KGVAYESAPNWIKNWEKTGLIKWNDKNGDGKLYYAAGKMEDPASKNEMKIDNDIIVLATPEIANLPAWVIALVAAGGLAA ALSTSAGLLLVISTSVSHDLLKKNLMPDISDKKELMFARLAAGVGIVIAGYFGVNPPGFVAAVVAFAFGLAASSLFPAII MGIFSKTMNKEGAIAGMLTGLLFTASYIIYFKFVDPTGNVAANWFLGISPEGIGMVGMLVNFGVAALVSRVTTATPLHVQ EMVESIRFPKGSGEASGH
Specific function: Unknown
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Escherichia coli, GI1790503, Length=509, Percent_Identity=26.9155206286837, Blast_Score=136, Evalue=5e-33, Organism=Escherichia coli, GI1787251, Length=498, Percent_Identity=22.0883534136546, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR019899 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 61500; Mature: 61500
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQTLTYIIVGLSFALYIGIAIWTRAGSTKEFYVAGGGVHPVVNGMATAADWMSAASFI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH SLAGIVSFVGYDGSVYLMGWTGGYVLLALCMAPYLRKFGKFTVPDFVGERYYSQAARTVA HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VICAIFICFTYIAGQMRGVGVVFSRFLEVEVDTGVYIGMAVVFFYAVLGGMKGITYTQVA HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHH QYCVLIFAFMVPAIFLSVMMTGHIIPQVGFGAELLDAAGNNSGVYLLEKLNNVSTELGFA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEEEHHCCHHHHCCCC PYTDGSKSMIDVFCITGALMMGTAGLPHVIVRFFTVPKVKDARISAGWALVFIGIMYTTV CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH PALSAFSRVNMIETINGPDSKGVAYESAPNWIKNWEKTGLIKWNDKNGDGKLYYAAGKME HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCHHHCCCEEEECCCCCCEEEEEECCCC DPASKNEMKIDNDIIVLATPEIANLPAWVIALVAAGGLAAALSTSAGLLLVISTSVSHDL CCCCCCCEEECCCEEEEECCCHHCCHHHHHHHHHHCHHHHHHHCCCCEEEEEECHHHHHH LKKNLMPDISDKKELMFARLAAGVGIVIAGYFGVNPPGFVAAVVAFAFGLAASSLFPAII HHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH MGIFSKTMNKEGAIAGMLTGLLFTASYIIYFKFVDPTGNVAANWFLGISPEGIGMVGMLV HHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHH NFGVAALVSRVTTATPLHVQEMVESIRFPKGSGEASGH HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDVQTLTYIIVGLSFALYIGIAIWTRAGSTKEFYVAGGGVHPVVNGMATAADWMSAASFI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH SLAGIVSFVGYDGSVYLMGWTGGYVLLALCMAPYLRKFGKFTVPDFVGERYYSQAARTVA HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VICAIFICFTYIAGQMRGVGVVFSRFLEVEVDTGVYIGMAVVFFYAVLGGMKGITYTQVA HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHH QYCVLIFAFMVPAIFLSVMMTGHIIPQVGFGAELLDAAGNNSGVYLLEKLNNVSTELGFA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEEEHHCCHHHHCCCC PYTDGSKSMIDVFCITGALMMGTAGLPHVIVRFFTVPKVKDARISAGWALVFIGIMYTTV CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH PALSAFSRVNMIETINGPDSKGVAYESAPNWIKNWEKTGLIKWNDKNGDGKLYYAAGKME HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCHHHCCCEEEECCCCCCEEEEEECCCC DPASKNEMKIDNDIIVLATPEIANLPAWVIALVAAGGLAAALSTSAGLLLVISTSVSHDL CCCCCCCEEECCCEEEEECCCHHCCHHHHHHHHHHCHHHHHHHCCCCEEEEEECHHHHHH LKKNLMPDISDKKELMFARLAAGVGIVIAGYFGVNPPGFVAAVVAFAFGLAASSLFPAII HHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH MGIFSKTMNKEGAIAGMLTGLLFTASYIIYFKFVDPTGNVAANWFLGISPEGIGMVGMLV HHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHH NFGVAALVSRVTTATPLHVQEMVESIRFPKGSGEASGH HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1356967 [H]