| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875862
Identifier: 160875862
GI number: 160875862
Start: 3270057
End: 3271904
Strand: Reverse
Name: 160875862
Synonym: Sbal195_2751
Alternate gene names: NA
Gene position: 3271904-3270057 (Counterclockwise)
Preceding gene: 160875863
Following gene: 160875861
Centisome position: 61.19
GC content: 48.7
Gene sequence:
>1848_bases ATGAATGCCAGTGAGTTACAACCCGTAGTGCAATTTCTACAAGGGCTAGTGCCTTTTGATACTCTGCCTGAAGATGTTGT GGTGCGCTGTGCTAAGGCTGTCACTGTCGGGTATTACAGTAAAGCCTCTGGTTATGTCAATTTCGATGCTAATTCGCCCA AGTTGTATATGGTGCGTAGCGGCGCCTTTGAGGTGCGCGATCCTGAAGGCGTGCTGGTCGATAGAGTCGGCGAGGGGGAG TTTTTTGGTTTTTCGACCTTGTTATCGGGGGAGAAAGTCGTCAACAAGGTCGCTATTCTCGAAGACGGTTTGGTTTATCA TTTGCCCCAAAGCTTGTTCGATAATCTCAGAAGCGAGAGCCGCAACTTCGATAAATTTTTTACCCGCGCATTTGCTAAAC GTTTACGTCATGAGGCTCGCTTTAAGGCGAAAGATCTGACGACCACTAGTCGGATCAGCACGTTAATGTCATCCGCGCCT ATTGTTATTGATGCCCACGCGAGCGTGACGCAGGCGGCACTCTTAATGCGAAACAGCCGAGTGTCATCCCTGTTGGTCAC GGATAATCACAAGCTAGTTGGGATTTTAACCGATAAGGATTTGCGTAATCGGGTGTTAGCGGTGGGGCTTGACGGCCATA TCGCAGTGCATCAAGCCATGACAGTTTCGCCGATCTCAATTTCATCCAATGCGTTGATTTTTGAAGCCATGTTGCTGATG AGTGAGCATAACATTCATCACTTACCCATTATCGACCAAGATAAAGCTATCGGCATGGTGACCAGTACCGACATCTTGCG CGGGCAGGGCTCGCAACCGCTGCTGTTGATTGGCGAGATTGAACGTCAGCAGGATCTTGCCAGTTTAATTAGCGTCAGTA AGCAAATTCCGCTGTTACTGCAAAATTTGATCAGTGCCGATGCCAGAGCCGAAGAAATTGGCCGAGTATTAACGTCAGTC ACCGATGCGCTGACACGGCGATTAATCGTGCTCAATCAACAATTGCTCGGTGAGCCGCCCATGGCTTTTTGCTGGTTGGC GTTTGGATCGCAGGGACGCCAAGATCAAGCGGCGTGTTCAGATCAAGATAATGGTCTGTTAGTCGCAGAAGAGATGGATG ATTTTGCCAAAGGTTATTTCGATGCCTTAACCCATGCGGTGTGCGCTGGGCTTGACCAATGCGGTTATGAGTTTTGCCCC GGCAACATTATGGCGCAAAACCCACAGTGGCGAATGTCGCTTAAACAGTGGCAACAAGTATTTGAAAAATGGGTAATAAC ACCCGAGCCTAAGGCGTTACTGCACGCCAGTATCTTCTTTGATATGCGCTCGGTGTACGGTCCACAAACCTTATTTGATG CGCTGCAGGATAAAGTCTTGGCTCAAACCCGTGATAACGATATTTTCCTCGCGGGCATGACAGGTAATTCGCTGGTGGAA TCGCCACCGCTGGGCTTTTTCCGCAAATTTGTCCTCGAACGTGACGGCAGTGAAGTCAAAGGCATAGATTTGAAGCATAA GGGCAATGCTTTAATCAATGATATTGCCCGTGTTTATGCCCTGTCGGCAGGGATCAAAGAAGTGAATACTGCGAAACGTA TCCGTGCCTTGATGGACGCAAACATTCTCAATCGTAAAGATGCGCTTAATCTTGCCGATGCCCACGAGTTTATCGCCCAT ATGCGGTTATCGAACCAAGGTTATCAGCATAATCTCGGGCTAGAGGTGAGCAATTATCTGTTACCCGCACATTTATCTTC GCTGGTCCGCCATCAGCTACGTGATGCCTTTAAAGTGGTGCATGAGGCGCAGGCGGGGATGAAGATGAAGTTCATGCGAA GTTTTTGA
Upstream 100 bases:
>100_bases AGTATCCTAAGGCTGACTTTAGTCGAATGTAGCGCAGCGACAATGCAGGCTATAGTGATGACATATAAGTAAAAGTTTCG CCTAACAGAAGGTGTTGCCT
Downstream 100 bases:
>100_bases TATGAATACACTGCTGCTGAAAACGAAACTTAATTGGCGGGCGCTACGTTGCCAACATCAGTTATTTAAGGGCTATTATC AATCGCTATTACCTCTGCTG
Product: CBS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRSGAFEVRDPEGVLVDRVGEGE FFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDNLRSESRNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAP IVIDAHASVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLAVGLDGHIAVHQAMTVSPISISSNALIFEAMLLM SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLLQNLISADARAEEIGRVLTSV TDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACSDQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCP GNIMAQNPQWRMSLKQWQQVFEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDANILNRKDALNLADAHEFIAH MRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVVHEAQAGMKMKFMRSF
Sequences:
>Translated_615_residues MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRSGAFEVRDPEGVLVDRVGEGE FFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDNLRSESRNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAP IVIDAHASVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLAVGLDGHIAVHQAMTVSPISISSNALIFEAMLLM SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLLQNLISADARAEEIGRVLTSV TDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACSDQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCP GNIMAQNPQWRMSLKQWQQVFEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDANILNRKDALNLADAHEFIAH MRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVVHEAQAGMKMKFMRSF >Mature_615_residues MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRSGAFEVRDPEGVLVDRVGEGE FFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDNLRSESRNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAP IVIDAHASVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLAVGLDGHIAVHQAMTVSPISISSNALIFEAMLLM SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLLQNLISADARAEEIGRVLTSV TDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACSDQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCP GNIMAQNPQWRMSLKQWQQVFEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDANILNRKDALNLADAHEFIAH MRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVVHEAQAGMKMKFMRSF
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 68296; Mature: 68296
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRS CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEECCCCCEEEEEEC GAFEVRDPEGVLVDRVGEGEFFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDNLRSES CCEEEECCCCCEEEECCCCCEECHHHHHCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCC RNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAPIVIDAHASVTQAALLMRNSR CCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCC VSSLLVTDNHKLVGILTDKDLRNRVLAVGLDGHIAVHQAMTVSPISISSNALIFEAMLLM CCEEEEECCCEEEEEEECCHHHCCEEEEECCCCEEEECCEEECCEECCCCHHHHHHHHHH SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLL HCCCCEECCEECCCCCCEEEECCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH QNLISADARAEEIGRVLTSVTDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEHHCCCCCCCHHCCC DQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCPGNIMAQNPQWRMSLKQWQQV CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHCCCEECCCCEEECCCHHHHHHHHHHHH FEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDA CCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH NILNRKDALNLADAHEFIAHMRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVV HHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HEAQAGMKMKFMRSF HHHHCCCCHHHHHCC >Mature Secondary Structure MNASELQPVVQFLQGLVPFDTLPEDVVVRCAKAVTVGYYSKASGYVNFDANSPKLYMVRS CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEECCCCCEEEEEEC GAFEVRDPEGVLVDRVGEGEFFGFSTLLSGEKVVNKVAILEDGLVYHLPQSLFDNLRSES CCEEEECCCCCEEEECCCCCEECHHHHHCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCC RNFDKFFTRAFAKRLRHEARFKAKDLTTTSRISTLMSSAPIVIDAHASVTQAALLMRNSR CCHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCC VSSLLVTDNHKLVGILTDKDLRNRVLAVGLDGHIAVHQAMTVSPISISSNALIFEAMLLM CCEEEEECCCEEEEEEECCHHHCCEEEEECCCCEEEECCEEECCEECCCCHHHHHHHHHH SEHNIHHLPIIDQDKAIGMVTSTDILRGQGSQPLLLIGEIERQQDLASLISVSKQIPLLL HCCCCEECCEECCCCCCEEEECCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH QNLISADARAEEIGRVLTSVTDALTRRLIVLNQQLLGEPPMAFCWLAFGSQGRQDQAACS HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEHHCCCCCCCHHCCC DQDNGLLVAEEMDDFAKGYFDALTHAVCAGLDQCGYEFCPGNIMAQNPQWRMSLKQWQQV CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCHHHCCCEECCCCEEECCCHHHHHHHHHHHH FEKWVITPEPKALLHASIFFDMRSVYGPQTLFDALQDKVLAQTRDNDIFLAGMTGNSLVE HHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC SPPLGFFRKFVLERDGSEVKGIDLKHKGNALINDIARVYALSAGIKEVNTAKRIRALMDA CCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH NILNRKDALNLADAHEFIAHMRLSNQGYQHNLGLEVSNYLLPAHLSSLVRHQLRDAFKVV HHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HEAQAGMKMKFMRSF HHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]